Search of human proteins with 4757884

Search of human proteins with 4757884

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4757884 hypothetical protein LOC753 isoform beta 1 [Homo
sapiens]
         (248 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4757884 hypothetical protein LOC753 isoform beta 1 [Homo sapi...   510   e-145
gi|51093708 hypothetical protein LOC753 isoform gamma 1 [Homo sa...   507   e-144
gi|41281943 hypothetical protein LOC753 isoform alpha 1 [Homo sa...   506   e-144
gi|41281948 hypothetical protein LOC753 isoform beta 2 [Homo sap...   461   e-130
gi|51093710 hypothetical protein LOC753 isoform gamma 2 [Homo sa...   457   e-129
gi|41281957 hypothetical protein LOC753 isoform alpha 2 [Homo sa...   456   e-129
gi|40317616 transmembrane prostate androgen-induced protein isof...   327   6e-90
gi|21361841 transmembrane prostate androgen-induced protein isof...   325   2e-89
gi|40317620 transmembrane prostate androgen-induced protein isof...   305   2e-83
gi|40317618 transmembrane prostate androgen-induced protein isof...   305   2e-83
gi|55750053 atrophin-1 [Homo sapiens]                                  38   0.007
gi|55750041 atrophin-1 [Homo sapiens]                                  38   0.007
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     36   0.027
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ...    35   0.046
gi|23110964 cathepsin W preproprotein [Homo sapiens]                   35   0.079
gi|190341097 rhomboid family 1 [Homo sapiens]                          33   0.23 
gi|29789403 PDZ domain containing 8 [Homo sapiens]                     32   0.67 
gi|150456424 RW1 protein [Homo sapiens]                                31   0.88 
gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ...    31   1.1  
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    30   2.0  
gi|13325064 cadherin EGF LAG seven-pass G-type receptor 2 [Homo ...    30   2.5  
gi|74271888 lipin 3 [Homo sapiens]                                     30   2.5  
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         30   2.5  
gi|238908524 hypothetical protein LOC389333 [Homo sapiens]             29   3.3  
gi|62244004 modulator of estrogen induced transcription isoform ...    29   3.3  
gi|63176611 modulator of estrogen induced transcription isoform ...    29   3.3  
gi|164419746 nuclear factor of activated T-cells 5 isoform d [Ho...    29   3.3  
gi|164419744 nuclear factor of activated T-cells 5 isoform b [Ho...    29   3.3  
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi...    29   3.3  
gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo ...    29   4.3  

>gi|4757884 hypothetical protein LOC753 isoform beta 1 [Homo
           sapiens]
          Length = 248

 Score =  510 bits (1314), Expect = e-145
 Identities = 248/248 (100%), Positives = 248/248 (100%)

Query: 1   MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWP 60
           MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWP
Sbjct: 1   MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWP 60

Query: 61  SDSAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 120
           SDSAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE
Sbjct: 61  SDSAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 120

Query: 121 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 180
           EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS
Sbjct: 121 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 180

Query: 181 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGK 240
           ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGK
Sbjct: 181 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGK 240

Query: 241 DRKPGNLV 248
           DRKPGNLV
Sbjct: 241 DRKPGNLV 248


>gi|51093708 hypothetical protein LOC753 isoform gamma 1 [Homo
           sapiens]
          Length = 269

 Score =  507 bits (1305), Expect = e-144
 Identities = 246/246 (100%), Positives = 246/246 (100%)

Query: 3   AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 62
           AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD
Sbjct: 24  AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 83

Query: 63  SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 122
           SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 84  SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 143

Query: 123 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 182
           PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 144 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 203

Query: 183 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 242
           TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 204 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 263

Query: 243 KPGNLV 248
           KPGNLV
Sbjct: 264 KPGNLV 269


>gi|41281943 hypothetical protein LOC753 isoform alpha 1 [Homo
           sapiens]
          Length = 306

 Score =  506 bits (1302), Expect = e-144
 Identities = 245/246 (99%), Positives = 246/246 (100%)

Query: 3   AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 62
           +ELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD
Sbjct: 61  SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120

Query: 63  SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 122
           SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 121 SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 180

Query: 123 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 182
           PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 181 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 240

Query: 183 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 242
           TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 241 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 300

Query: 243 KPGNLV 248
           KPGNLV
Sbjct: 301 KPGNLV 306


>gi|41281948 hypothetical protein LOC753 isoform beta 2 [Homo
           sapiens]
          Length = 230

 Score =  461 bits (1186), Expect = e-130
 Identities = 230/248 (92%), Positives = 230/248 (92%), Gaps = 18/248 (7%)

Query: 1   MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWP 60
           MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ      
Sbjct: 1   MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ------ 54

Query: 61  SDSAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 120
                       IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE
Sbjct: 55  ------------IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 102

Query: 121 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 180
           EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS
Sbjct: 103 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 162

Query: 181 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGK 240
           ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGK
Sbjct: 163 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGK 222

Query: 241 DRKPGNLV 248
           DRKPGNLV
Sbjct: 223 DRKPGNLV 230


>gi|51093710 hypothetical protein LOC753 isoform gamma 2 [Homo
           sapiens]
          Length = 251

 Score =  457 bits (1177), Expect = e-129
 Identities = 228/246 (92%), Positives = 228/246 (92%), Gaps = 18/246 (7%)

Query: 3   AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 62
           AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ        
Sbjct: 24  AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ-------- 75

Query: 63  SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 122
                     IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 76  ----------IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 125

Query: 123 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 182
           PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 126 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 185

Query: 183 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 242
           TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 186 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 245

Query: 243 KPGNLV 248
           KPGNLV
Sbjct: 246 KPGNLV 251


>gi|41281957 hypothetical protein LOC753 isoform alpha 2 [Homo
           sapiens]
          Length = 288

 Score =  456 bits (1174), Expect = e-129
 Identities = 227/246 (92%), Positives = 228/246 (92%), Gaps = 18/246 (7%)

Query: 3   AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 62
           +ELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ        
Sbjct: 61  SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ-------- 112

Query: 63  SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 122
                     IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 113 ----------IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 162

Query: 123 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 182
           PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 163 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 222

Query: 183 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 242
           TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 223 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 282

Query: 243 KPGNLV 248
           KPGNLV
Sbjct: 283 KPGNLV 288


>gi|40317616 transmembrane prostate androgen-induced protein isoform
           b [Homo sapiens]
          Length = 252

 Score =  327 bits (838), Expect = 6e-90
 Identities = 169/250 (67%), Positives = 190/250 (76%), Gaps = 7/250 (2%)

Query: 3   AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 62
           AELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L  EGCLWPS+
Sbjct: 2   AELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSE 61

Query: 63  SAAPRLGASE--IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 120
           S     G  E  +   PR  DR   P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGE
Sbjct: 62  STVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGE 121

Query: 121 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 180
           EPPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A   GGPCPPSSNSGIS
Sbjct: 122 EPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGIS 180

Query: 181 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVP 236
           A+   S GRMEGPPPTYSEV+GH+PG+SF H Q S   +   G+RL        ES  + 
Sbjct: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240

Query: 237 IKGKDRKPGN 246
            K KD++ G+
Sbjct: 241 SKEKDKQKGH 250


>gi|21361841 transmembrane prostate androgen-induced protein isoform
           a [Homo sapiens]
          Length = 287

 Score =  325 bits (834), Expect = 2e-89
 Identities = 168/249 (67%), Positives = 189/249 (75%), Gaps = 7/249 (2%)

Query: 4   ELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSDS 63
           ELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L  EGCLWPS+S
Sbjct: 38  ELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSES 97

Query: 64  AAPRLGASE--IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEE 121
                G  E  +   PR  DR   P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGEE
Sbjct: 98  TVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEE 157

Query: 122 PPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISA 181
           PPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A   GGPCPPSSNSGISA
Sbjct: 158 PPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGISA 216

Query: 182 STCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVPI 237
           +   S GRMEGPPPTYSEV+GH+PG+SF H Q S   +   G+RL        ES  +  
Sbjct: 217 TCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWS 276

Query: 238 KGKDRKPGN 246
           K KD++ G+
Sbjct: 277 KEKDKQKGH 285


>gi|40317620 transmembrane prostate androgen-induced protein isoform
           c [Homo sapiens]
          Length = 237

 Score =  305 bits (781), Expect = 2e-83
 Identities = 156/234 (66%), Positives = 176/234 (75%), Gaps = 7/234 (2%)

Query: 19  VMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSDSAAPRLGASE--IMHA 76
           VMVVVI CLL+HYK+S RSFI+R +Q RRRED L  EGCLWPS+S     G  E  +   
Sbjct: 3   VMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVYAP 62

Query: 77  PRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 136
           PR  DR   P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP
Sbjct: 63  PRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 122

Query: 137 EQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPT 196
           EQQ+ELNRESVRAPPNRTIFDSDL+D A   GGPCPPSSNSGISA+   S GRMEGPPPT
Sbjct: 123 EQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGISATCYGSGGRMEGPPPT 181

Query: 197 YSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVPIKGKDRKPGN 246
           YSEV+GH+PG+SF H Q S   +   G+RL        ES  +  K KD++ G+
Sbjct: 182 YSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGH 235


>gi|40317618 transmembrane prostate androgen-induced protein isoform
           c [Homo sapiens]
          Length = 237

 Score =  305 bits (781), Expect = 2e-83
 Identities = 156/234 (66%), Positives = 176/234 (75%), Gaps = 7/234 (2%)

Query: 19  VMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSDSAAPRLGASE--IMHA 76
           VMVVVI CLL+HYK+S RSFI+R +Q RRRED L  EGCLWPS+S     G  E  +   
Sbjct: 3   VMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVYAP 62

Query: 77  PRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 136
           PR  DR   P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP
Sbjct: 63  PRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 122

Query: 137 EQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPT 196
           EQQ+ELNRESVRAPPNRTIFDSDL+D A   GGPCPPSSNSGISA+   S GRMEGPPPT
Sbjct: 123 EQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGISATCYGSGGRMEGPPPT 181

Query: 197 YSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVPIKGKDRKPGN 246
           YSEV+GH+PG+SF H Q S   +   G+RL        ES  +  K KD++ G+
Sbjct: 182 YSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGH 235


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 43/185 (23%), Positives = 66/185 (35%), Gaps = 43/185 (23%)

Query: 53  PQEGCLWPSDSAAPR------LGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQH 106
           P    L P+ S+AP         +S    A  S    ++ S       S+  P+YP+   
Sbjct: 354 PSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPH--- 410

Query: 107 EIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMY 166
               PP  SLS   +PP Y  P       P Q                         A++
Sbjct: 411 --SFPPPTSLSVSNQPPKYTQPSL-----PSQ-------------------------AVW 438

Query: 167 SGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQ 226
           S GP PP     + A++ +  G    PP T ++   H P ++  HH +    +  + Q Q
Sbjct: 439 SQGPPPPPPYGRLLANSNAHPGPF--PPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQ 496

Query: 227 QNNAE 231
           Q   +
Sbjct: 497 QQQQQ 501


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 43/185 (23%), Positives = 66/185 (35%), Gaps = 43/185 (23%)

Query: 53  PQEGCLWPSDSAAPR------LGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQH 106
           P    L P+ S+AP         +S    A  S    ++ S       S+  P+YP+   
Sbjct: 354 PSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPH--- 410

Query: 107 EIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMY 166
               PP  SLS   +PP Y  P       P Q                         A++
Sbjct: 411 --SFPPPTSLSVSNQPPKYTQPSL-----PSQ-------------------------AVW 438

Query: 167 SGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQ 226
           S GP PP     + A++ +  G    PP T ++   H P ++  HH +    +  + Q Q
Sbjct: 439 SQGPPPPPPYGRLLANSNAHPGPF--PPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQ 496

Query: 227 QNNAE 231
           Q   +
Sbjct: 497 QQQQQ 501


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 36.2 bits (82), Expect = 0.027
 Identities = 39/151 (25%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 54  QEGCLWPSDSAAP-RLGASEIMHAPRSRDRFTAPSFIQRD-------RFSRFQPTYPYVQ 105
           Q G  + S S +P R  A +  + PR+R++FT PS + RD       R  R +      Q
Sbjct: 179 QHGLYYASRSRSPNRFDAHDPRYEPRAREQFTLPSVVHRDIYRDDITREVRGRRPERNYQ 238

Query: 106 HEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAM 165
           H     P  S S  + P       +   R P      +R S           SD I  + 
Sbjct: 239 HSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSS----------SSDSISSSS 288

Query: 166 YSGGPCPPSSNSGISASTCSSNGRMEGPPPT 196
            +      SS+S    S   S      P PT
Sbjct: 289 STSSDSSDSSSSSSDDSPARSVQSAAVPAPT 319


>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
            subunit [Homo sapiens]
          Length = 2339

 Score = 35.4 bits (80), Expect = 0.046
 Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 6/139 (4%)

Query: 90   QRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRA 149
            +RDR  R     P +  ++D  P+ ++  G   PP +GP   + R+ E++ E  R   R 
Sbjct: 2059 RRDRKQRSLEKGPSLSADMDGAPSSAVGPGL--PPGEGPTGCR-RERERRQERGRSQERR 2115

Query: 150  PPNRTIFDSDLIDIAMYSGGPCPPSSNSGISA-STCSSNGRMEGPPPTYSEVMGHHPGAS 208
             P+ +  +          GG  PP     +S+  T  + G+  GP P  S  +   P  S
Sbjct: 2116 QPSSSSSEKQRFYSCDRFGGREPPKPKPSLSSHPTSPTAGQEPGPHPQGSGSVNGSPLLS 2175

Query: 209  FLHHQRSNAHRGSRLQFQQ 227
                  S   RG R Q  Q
Sbjct: 2176 --TSGASTPGRGGRRQLPQ 2192


>gi|23110964 cathepsin W preproprotein [Homo sapiens]
          Length = 376

 Score = 34.7 bits (78), Expect = 0.079
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 11/119 (9%)

Query: 127 GPCTLQLRDPEQQMELNRESV-RAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCS 185
           GP T+ +    + ++L R+ V +A P  T  D  L+D ++   G     S  GI A T S
Sbjct: 258 GPITVTIN--MKPLQLYRKGVIKATP--TTCDPQLVDHSVLLVGFGSVKSEEGIWAETVS 313

Query: 186 SNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKP 244
           S  + + P PT   ++ +  GA +        HRGS      N    T  P+  + +KP
Sbjct: 314 SQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGS------NTCGITKFPLTARVQKP 366


>gi|190341097 rhomboid family 1 [Homo sapiens]
          Length = 855

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 96  RFQPTYPYVQHEIDLPP--TISLSDGEEPPP-YQGPCTLQLR 134
           R+    P V  E+DLP    +SL+  E PPP Y GPC L ++
Sbjct: 112 RYGKLKPQVLRELDLPSQDNVSLTSTETPPPLYVGPCQLGMQ 153


>gi|29789403 PDZ domain containing 8 [Homo sapiens]
          Length = 1154

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 110 LPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPP 151
           LPP I   DG +PPP +   T ++ DP Q  +  + S   PP
Sbjct: 552 LPPKIQSKDGNKPPPLK---TSEITDPAQVSKPTQGSAFKPP 590


>gi|150456424 RW1 protein [Homo sapiens]
          Length = 1883

 Score = 31.2 bits (69), Expect = 0.88
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 176  NSGISASTCSSNGRMEGPPPTYSEVMGHHPGAS 208
            NS    +T SS G  + PPP +  V  H PG+S
Sbjct: 1543 NSQELGNTSSSEGEKDSPPPEWDSVPVHKPGSS 1575


>gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo
            sapiens]
          Length = 1835

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 167  SGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEVM 201
            S  P P ++N   +A + SS  + +GPPPT S+++
Sbjct: 973  SPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQML 1007


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 28/101 (27%)

Query: 99  PTYP---YVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTI 155
           PT P    +Q+++ +PP  S      P P Q P   Q + PE  +         PP   +
Sbjct: 829 PTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPL---------PPAPHL 879

Query: 156 FDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPT 196
                           PPSS S   AS+  ++ R+  P P+
Sbjct: 880 ----------------PPSSTSSAVASSSETSSRLPAPTPS 904



 Score = 30.0 bits (66), Expect = 2.0
 Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 9/95 (9%)

Query: 42  PNQSRRREDGLPQEGCLWPSDSAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTY 101
           P Q   R    P EG L P+    P   +S +  +  +  R  AP+       S FQ  +
Sbjct: 857 PPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPT------PSDFQLQF 910

Query: 102 PYVQ--HEIDL-PPTISLSDGEEPPPYQGPCTLQL 133
           P  Q  H+    PPT+ L      PP   P T Q+
Sbjct: 911 PPSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQM 945


>gi|13325064 cadherin EGF LAG seven-pass G-type receptor 2 [Homo
            sapiens]
          Length = 2923

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 104  VQHEIDLPP----TISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRA 149
            VQ + D P      +SLS G+ P P  GP  L   D ++++ LNR  + A
Sbjct: 1169 VQRDTDAPGGHILNVSLSVGQPPGPGGGPPFLPSEDLQERLYLNRSLLTA 1218


>gi|74271888 lipin 3 [Homo sapiens]
          Length = 851

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 41  RPNQSRRREDGLPQEGCLWPSDSAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPT 100
           R  + RRR+    ++     S       GA   +  P        P  +Q +  S  QP 
Sbjct: 141 RRKRRRRRKPKQKEDAVATDSSPEELEAGAESELSLPEKLR--PEPPGVQLEEKSSLQPK 198

Query: 101 YPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPE 137
             Y   + + PP  SLS GE   P +    L++R PE
Sbjct: 199 DIYPYSDGEWPPQASLSAGELTSP-KSDSELEVRTPE 234


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 11/85 (12%)

Query: 111  PPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGP 170
            P   S+S  E  PP  GPC                S+  PP +       I++ + +GG 
Sbjct: 2791 PSVRSMSGPESSPPIGGPCE----------AAPSSSLPTPPQQPFIARRHIELGV-TGGG 2839

Query: 171  CPPSSNSGISASTCSSNGRMEGPPP 195
             P + +  + A T  +  R  G PP
Sbjct: 2840 SPENGDGALLAITPPAVKRRRGRPP 2864


>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
          Length = 1015

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 34/140 (24%), Positives = 53/140 (37%), Gaps = 20/140 (14%)

Query: 54  QEGCLWPSDSAAPRLGASEIMH------APRSRDRFTAP-------SFIQRDRFSRFQPT 100
           Q   + P+   +PR G+ ++        AP+ +   TAP       + + R+  +    T
Sbjct: 787 QRSPVGPAGVRSPRPGSPQMQASPSPGIAPKPKTPPTAPEPAAAVQAPLPREPLALAGRT 846

Query: 101 YPYVQHEIDLPPTI----SLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIF 156
            P        PPT     S S G    P   P    L DPE       E+ R P  R +F
Sbjct: 847 APAQPRAASAPPTDRSPQSPSQGARRQPGAAPLGKVLVDPESGRYYFVEAPRQPRLRVLF 906

Query: 157 DSD---LIDIAMYSGGPCPP 173
           D +    +++ +    P PP
Sbjct: 907 DPESGQYVEVLLPPSSPGPP 926


>gi|62244004 modulator of estrogen induced transcription isoform b
           [Homo sapiens]
          Length = 1016

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 48/165 (29%), Positives = 65/165 (39%), Gaps = 28/165 (16%)

Query: 78  RSRDRFTAPSFIQ------RDRF---SRFQPTYPYVQHEID----LPPTISLSDGEEPPP 124
           R R RF   S +Q      RDRF   S  +   P  + E       P   S S   EPPP
Sbjct: 756 RERGRFPESSAVQSSSFERRDRFVGQSEGKKARPTARREDPSFERYPKNFSDSRRNEPPP 815

Query: 125 YQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAM----YSGGPCP--PSS-NS 177
            +     +LR+ +++        R    RT+   D  DI         GP P  P+S  S
Sbjct: 816 PRN----ELRESDRREVRGERDER----RTVIIHDRPDITHPRHPREAGPNPSRPTSWKS 867

Query: 178 GISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSR 222
             S ST     R+E P  +  EV GH    +   ++ S +  GSR
Sbjct: 868 EGSMSTDKRETRVERPERSGREVSGHSVRGAPPGNRSSASGYGSR 912


>gi|63176611 modulator of estrogen induced transcription isoform a
           [Homo sapiens]
          Length = 1034

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 48/165 (29%), Positives = 65/165 (39%), Gaps = 28/165 (16%)

Query: 78  RSRDRFTAPSFIQ------RDRF---SRFQPTYPYVQHEID----LPPTISLSDGEEPPP 124
           R R RF   S +Q      RDRF   S  +   P  + E       P   S S   EPPP
Sbjct: 774 RERGRFPESSAVQSSSFERRDRFVGQSEGKKARPTARREDPSFERYPKNFSDSRRNEPPP 833

Query: 125 YQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAM----YSGGPCP--PSS-NS 177
            +     +LR+ +++        R    RT+   D  DI         GP P  P+S  S
Sbjct: 834 PRN----ELRESDRREVRGERDER----RTVIIHDRPDITHPRHPREAGPNPSRPTSWKS 885

Query: 178 GISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSR 222
             S ST     R+E P  +  EV GH    +   ++ S +  GSR
Sbjct: 886 EGSMSTDKRETRVERPERSGREVSGHSVRGAPPGNRSSASGYGSR 930


>gi|164419746 nuclear factor of activated T-cells 5 isoform d [Homo
           sapiens]
          Length = 1548

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 143 NRESVRAPPNRTIFDSDLIDIAMYSGGP----CPPSSNSGISASTCSSNGRMEGPPP 195
           +R+S++  P++    + L++ ++Y   P     PPS  + +++ + +S G    PPP
Sbjct: 23  SRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPP 79


>gi|164419744 nuclear factor of activated T-cells 5 isoform b [Homo
           sapiens]
          Length = 1549

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 143 NRESVRAPPNRTIFDSDLIDIAMYSGGP----CPPSSNSGISASTCSSNGRMEGPPP 195
           +R+S++  P++    + L++ ++Y   P     PPS  + +++ + +S G    PPP
Sbjct: 23  SRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPP 79


>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
           sapiens]
          Length = 674

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 15/124 (12%)

Query: 111 PPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAP-PNRTIFDSDLIDIAMYSGG 169
           PP+ +  D     PY+       R P +    +R   R+P P R   +  +  I  + G 
Sbjct: 286 PPSYARRDSPTYDPYK-------RSPSESSSESRSRSRSPTPGR---EEKITFITSFGGS 335

Query: 170 PCPPSSNSGISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNN 229
                  +  +A+  +++G   G PP   +  G  PG +    +RS++   S    + ++
Sbjct: 336 ----DEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGRNASARRRSSSSSSSSSASRTSS 391

Query: 230 AEST 233
           + S+
Sbjct: 392 SRSS 395


>gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo
           sapiens]
          Length = 389

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 16/77 (20%)

Query: 109 DLPPTISLSDGEE----PPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIA 164
           D  P + L D +     PPP      LQL DP+           APP  +   +  ++  
Sbjct: 65  DSSPGLQLHDPQSGTSAPPP-----GLQLHDPQT-------GTSAPPRVSSCTTRKLEHQ 112

Query: 165 MYSGGPCPPSSNSGISA 181
            +SG P  P SN  IS+
Sbjct: 113 PHSGSPAAPPSNCNISS 129


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,620,207
Number of Sequences: 37866
Number of extensions: 615761
Number of successful extensions: 2430
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 2346
Number of HSP's gapped (non-prelim): 81
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.