| Name: RHBDF1 | Sequence: fasta or formatted (855aa) | NCBI GI: 190341097 | |
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Description: rhomboid family 1
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.9 59 4 C cysteine 3.3 28 2 D aspartate 4.7 40 2 E glutamate 6.2 53 3 F phenylalanine 6.1 52 2 G glycine 5.6 48 2 H histidine 3.3 28 2 I isoleucine 4.6 39 3 K lysine 4.1 35 2 L leucine 9.7 83 2 M methionine 1.5 13 1 N asparagine 1.4 12 1 P proline 6.5 56 3 Q glutamine 4.3 37 2 R arginine 8.5 73 3 S serine 8.1 69 3 T threonine 4.9 42 2 V valine 6.1 52 2 W tryptophan 2.0 17 1 Y tyrosine 2.2 19 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 rhomboid family 1 RHBDF2 0.543 rhomboid, veinlet-like 6 isoform 2 RHBDF2 0.540 rhomboid, veinlet-like 6 isoform 1 RHBDL2 0.023 rhomboid protease 2 RHBDL3 0.017 rhomboid protease 3 RHBDL1 0.010 rhomboid protease 1 DISP2 0.010 dispatched B ALK 0.007 anaplastic lymphoma kinase PARL 0.006 presenilin associated, rhomboid-like isoform 1 prepr... C18orf1 0.005 hypothetical protein LOC753 isoform alpha 1 C18orf1 0.005 hypothetical protein LOC753 isoform alpha 2 C18orf1 0.005 hypothetical protein LOC753 isoform beta 1 C18orf1 0.005 hypothetical protein LOC753 isoform beta 2 C18orf1 0.005 hypothetical protein LOC753 isoform gamma 2 C18orf1 0.005 hypothetical protein LOC753 isoform gamma 1 ZCCHC8 0.005 zinc finger, CCHC domain containing 8 ABCA13 0.005 ATP binding cassette, sub-family A (ABC1), member 13... LOC646698 0.004 PREDICTED: hypothetical protein LOC646698 PMEPA1 0.004 transmembrane prostate androgen-induced protein isof... PMEPA1 0.004 transmembrane prostate androgen-induced protein isof... PMEPA1 0.004 transmembrane prostate androgen-induced protein isof... PMEPA1 0.004 transmembrane prostate androgen-induced protein isof... LOC646698 0.003 PREDICTED: similar to hCG92381 LOC646698 0.003 PREDICTED: similar to hCG92381 AHCTF1 0.003 transcription factor ELYS LMBRD2 0.003 LMBR1 domain containing 2 NELF 0.003 nasal embryonic LHRH factor isoform a NELF 0.003 nasal embryonic LHRH factor isoform b LOC728597 0.003 PREDICTED: doublecortin domain-containing protein E... LOC728597 0.003 PREDICTED: doublecortin domain-containing protein E...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
