PDZD8 25075

Name: PDZD8	Sequence: fasta or formatted (1154aa)		NCBI GI: 29789403
Description: PDZ domain containing 8		Referenced in: PDZ Domain
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 76 3 C cysteine 1.8 21 1 D aspartate 5.4 62 2 E glutamate 8.8 101 3 F phenylalanine 3.9 45 2 G glycine 5.9 68 3 H histidine 1.9 22 2 I isoleucine 4.5 52 2 K lysine 6.9 80 3 L leucine 11.4 132 3 M methionine 0.7 8 1 N asparagine 3.0 35 2 P proline 6.3 73 3 Q glutamine 4.2 49 2 R arginine 5.5 64 2 S serine 7.5 86 3 T threonine 6.4 74 2 V valine 6.3 73 2 W tryptophan 0.8 9 1 Y tyrosine 2.1 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ domain containing 8 MYO9A 0.015 myosin IXA RASGRP4 0.009 RAS guanyl releasing protein 4 isoform a RASGRP4 0.009 RAS guanyl releasing protein 4 isoform g RASGRP4 0.009 RAS guanyl releasing protein 4 isoform f RASGRP4 0.009 RAS guanyl releasing protein 4 isoform e RASGRP4 0.009 RAS guanyl releasing protein 4 isoform d RASGRP4 0.009 RAS guanyl releasing protein 4 isoform c RASGRP4 0.009 RAS guanyl releasing protein 4 isoform b RASGRP1 0.009 RAS guanyl releasing protein 1 isoform b RASGRP1 0.009 RAS guanyl releasing protein 1 isoform a PRKCE 0.009 protein kinase C, epsilon FSCB 0.009 fibrous sheath CABYR binding protein PRKCH 0.009 protein kinase C, eta PRKD1 0.008 protein kinase D1 PDZK1 0.008 PDZ domain containing 1 PRKCB 0.008 protein kinase C, beta isoform 1 PRKCB 0.008 protein kinase C, beta isoform 2 PRKCQ 0.008 protein kinase C, theta PRKCA 0.007 protein kinase C, alpha PRKD3 0.007 protein kinase D3 BRD4 0.007 bromodomain-containing protein 4 isoform short BRD4 0.007 bromodomain-containing protein 4 isoform long PRKCG 0.007 protein kinase C, gamma PRKCD 0.007 protein kinase C, delta PRKCD 0.007 protein kinase C, delta NEFH 0.007 neurofilament, heavy polypeptide 200kDa RASSF1 0.007 Ras association domain family 1 isoform A WASF2 0.007 WAS protein family, member 2 CHN1 0.007 chimerin (chimaerin) 1 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.