Guide to the Human Genome
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Name: MAP4 Sequence: fasta or formatted (99aa) NCBI GI: 47519699
Description:

microtubule-associated protein 4 isoform 3

Referenced in:

Tubulins and Microtubules

Other entries for this name:
alt prot [1135aa] microtubule-associated protein 4 isoform 4
alt prot [817aa] microtubule-associated protein 4 isoform 5
alt prot [1152aa] microtubule-associated protein 4 isoform 1
alt prot [887aa] microtubule-associated protein 4 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1          8           1
 C cysteine            1.0          1           1
 D aspartate          11.1         11           2
 E glutamate          12.1         12           1
 F phenylalanine       2.0          2           1
 G glycine             8.1          8           2
 H histidine           1.0          1           1
 I isoleucine          5.1          5           1
 K lysine              7.1          7           3
 L leucine             8.1          8           2
 M methionine          1.0          1           1
 N asparagine          2.0          2           1
 P proline             6.1          6           1
 Q glutamine           1.0          1           1
 R arginine            1.0          1           1
 S serine              9.1          9           2
 T threonine          10.1         10           2
 V valine              5.1          5           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.0          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microtubule-associated protein 4 isoform 3 
MAP4                  0.983   microtubule-associated protein 4 isoform 4 
MAP4                  0.983   microtubule-associated protein 4 isoform 1 
RNF168                0.029   ring finger protein 168 
ST5                   0.023   suppression of tumorigenicity 5 isoform 1 
ST5                   0.023   suppression of tumorigenicity 5 isoform 1 
ST5                   0.023   suppression of tumorigenicity 5 isoform 2 
ACAN                  0.017   aggrecan isoform 2 precursor 
ACAN                  0.017   aggrecan isoform 1 precursor 
COL5A1                0.017   alpha 1 type V collagen preproprotein 
MRVI1                 0.012   JAW1-related protein isoform a 
MRVI1                 0.012   JAW1-related protein isoform c 
MRVI1                 0.012   JAW1-related protein isoform b 
MRVI1                 0.012   JAW1-related protein isoform b 
MKI67                 0.012   antigen identified by monoclonal antibody Ki-67 iso...
MKI67                 0.012   antigen identified by monoclonal antibody Ki-67 iso...
PPP4R2                0.012   protein phosphatase 4, regulatory subunit 2 
RBM25                 0.006   RNA binding motif protein 25 
WNK1                  0.006   WNK lysine deficient protein kinase 1 
ASH1L                 0.006   absent, small, or homeotic 1-like 
MED1                  0.006   mediator complex subunit 1 
ARID4A                0.006   retinoblastoma-binding protein 1 isoform III 
ARID4A                0.006   retinoblastoma-binding protein 1 isoform II 
ARID4A                0.006   retinoblastoma-binding protein 1 isoform I 
KIAA1305              0.006   hypothetical protein LOC57523 
GGA1                  0.006   golgi associated, gamma adaptin ear containing, ARF b...
CAMSAP1L1             0.006   calmodulin regulated spectrin-associated protein 1-l...
ZNF503                0.006   zinc finger protein 503 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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