Guide to the Human Genome
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Name: ST5 Sequence: fasta or formatted (717aa) NCBI GI: 21264614
Description:

suppression of tumorigenicity 5 isoform 2

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt prot [1137aa] suppression of tumorigenicity 5 isoform 1
alt prot [1137aa] suppression of tumorigenicity 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         33           2
 C cysteine            1.5         11           2
 D aspartate           4.7         34           2
 E glutamate           8.4         60           2
 F phenylalanine       5.3         38           2
 G glycine             4.3         31           2
 H histidine           1.7         12           1
 I isoleucine          3.1         22           1
 K lysine              6.6         47           3
 L leucine            12.4         89           3
 M methionine          2.5         18           1
 N asparagine          3.2         23           1
 P proline             5.7         41           2
 Q glutamine           3.9         28           2
 R arginine            8.5         61           3
 S serine             11.9         85           3
 T threonine           4.0         29           2
 V valine              4.7         34           3
 W tryptophan          0.7          5           1
 Y tyrosine            2.2         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppression of tumorigenicity 5 isoform 2 
ST5                   0.965   suppression of tumorigenicity 5 isoform 1 
ST5                   0.965   suppression of tumorigenicity 5 isoform 1 
DENND2A               0.545   DENN/MADD domain containing 2A 
DENND2C               0.471   DENN/MADD domain containing 2C 
DENND2D               0.289   DENN/MADD domain containing 2D 
DENND1A               0.091   DENN/MADD domain containing 1A isoform 2 
DENND1A               0.091   DENN/MADD domain containing 1A isoform 1 
DENND1B               0.085   DENN/MADD domain containing 1B isoform 1 
DENND1B               0.078   DENN/MADD domain containing 1B isoform 2 
DENND1C               0.072   DENN/MADD domain containing 1C 
DENND5A               0.042   RAB6 interacting protein 1 
DENND5B               0.039   DENN/MADD domain containing 5B 
DENND4A               0.039   DENN/MADD domain containing 4A isoform 1 
DENND4A               0.039   DENN/MADD domain containing 4A isoform 2 
DENND3                0.038   DENN/MADD domain containing 3 
DENND4C               0.036   DENN/MADD domain containing 4C 
DENND4B               0.034   DENN/MADD domain containing 4B 
SBF1                  0.032   SET binding factor 1 
SBF2                  0.031   SET binding factor 2 
MADD                  0.027   MAP-kinase activating death domain-containing prote...
MADD                  0.027   MAP-kinase activating death domain-containing prote...
MADD                  0.027   MAP-kinase activating death domain-containing prote...
MADD                  0.027   MAP-kinase activating death domain-containing protei...
MADD                  0.027   MAP-kinase activating death domain-containing prote...
MADD                  0.027   MAP-kinase activating death domain-containing prote...
MADD                  0.027   MAP-kinase activating death domain-containing prote...
MADD                  0.027   MAP-kinase activating death domain-containing prote...
MADD                  0.027   MAP-kinase activating death domain-containing prote...
MADD                  0.027   MAP-kinase activating death domain-containing prote...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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