Guide to the Human Genome
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Search of human proteins with 47132524

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]
         (407 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]             833   0.0  
gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]             833   0.0  
gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens]             833   0.0  
gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens]             833   0.0  
gi|27436877 tripartite motif-containing 59 [Homo sapiens]             209   5e-54
gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo s...   100   3e-21
gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]       99   5e-21
gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa...    97   2e-20
gi|30023818 tripartite motif protein 50A [Homo sapiens]                97   3e-20
gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]            94   2e-19
gi|37622899 ring finger protein 137 [Homo sapiens]                     93   4e-19
gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]    93   5e-19
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]    93   5e-19
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]    93   5e-19
gi|217035095 tripartite motif-containing 62 [Homo sapiens]             92   1e-18
gi|56605981 tripartite motif-containing 72 [Homo sapiens]              88   1e-17
gi|65285121 tripartite motif-containing 73 [Homo sapiens]              88   2e-17
gi|38524612 tripartite motif-containing 74 [Homo sapiens]              87   3e-17
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]    86   6e-17
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]    86   6e-17
gi|21630277 tripartite motif-containing 11 [Homo sapiens]              86   8e-17
gi|22749269 ring finger protein 129 [Homo sapiens]                     86   8e-17
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]            86   8e-17
gi|117938316 tripartite motif-containing 22 [Homo sapiens]             84   2e-16
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]       83   5e-16
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]       83   5e-16
gi|51477690 tripartite motif-containing 6 and tripartite motif-c...    83   5e-16
gi|62865604 tripartite motif protein 31 [Homo sapiens]                 82   7e-16
gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]     82   7e-16
gi|157426898 tripartite motif-containing 10 isoform 1 [Homo sapi...    82   1e-15

>gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]
          Length = 410

 Score =  833 bits (2152), Expect = 0.0
 Identities = 407/407 (100%), Positives = 407/407 (100%)

Query: 1   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
           MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE
Sbjct: 4   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 63

Query: 61  TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120
           TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR
Sbjct: 64  TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 123

Query: 121 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 180
           GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD
Sbjct: 124 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 183

Query: 181 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 240
           KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK
Sbjct: 184 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 243

Query: 241 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 300
           DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP
Sbjct: 244 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 303

Query: 301 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 360
           QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK
Sbjct: 304 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 363

Query: 361 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 407
           TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL
Sbjct: 364 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 410


>gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]
          Length = 407

 Score =  833 bits (2152), Expect = 0.0
 Identities = 407/407 (100%), Positives = 407/407 (100%)

Query: 1   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
           MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE
Sbjct: 1   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60

Query: 61  TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120
           TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR
Sbjct: 61  TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120

Query: 121 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 180
           GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD
Sbjct: 121 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 180

Query: 181 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 240
           KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK
Sbjct: 181 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 240

Query: 241 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 300
           DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP
Sbjct: 241 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 300

Query: 301 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 360
           QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK
Sbjct: 301 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 360

Query: 361 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 407
           TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL
Sbjct: 361 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 407


>gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens]
          Length = 407

 Score =  833 bits (2152), Expect = 0.0
 Identities = 407/407 (100%), Positives = 407/407 (100%)

Query: 1   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
           MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE
Sbjct: 1   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60

Query: 61  TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120
           TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR
Sbjct: 61  TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120

Query: 121 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 180
           GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD
Sbjct: 121 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 180

Query: 181 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 240
           KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK
Sbjct: 181 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 240

Query: 241 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 300
           DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP
Sbjct: 241 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 300

Query: 301 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 360
           QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK
Sbjct: 301 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 360

Query: 361 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 407
           TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL
Sbjct: 361 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 407


>gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens]
          Length = 407

 Score =  833 bits (2152), Expect = 0.0
 Identities = 407/407 (100%), Positives = 407/407 (100%)

Query: 1   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
           MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE
Sbjct: 1   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60

Query: 61  TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120
           TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR
Sbjct: 61  TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120

Query: 121 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 180
           GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD
Sbjct: 121 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 180

Query: 181 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 240
           KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK
Sbjct: 181 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 240

Query: 241 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 300
           DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP
Sbjct: 241 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 300

Query: 301 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 360
           QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK
Sbjct: 301 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 360

Query: 361 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 407
           TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL
Sbjct: 361 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 407


>gi|27436877 tripartite motif-containing 59 [Homo sapiens]
          Length = 403

 Score =  209 bits (531), Expect = 5e-54
 Identities = 105/306 (34%), Positives = 174/306 (56%), Gaps = 7/306 (2%)

Query: 1   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPA--PFKCPTCR 58
           M   EE+LTCPIC S+F+DPRVLPCSH FC+ CLE IL+ S    +WRP   P KCP CR
Sbjct: 1   MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60

Query: 59  K--ETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGI 116
              E + TGI SL VN++L+ I+EKY + +  P +  C  H  QPLN++CL D +L+CG 
Sbjct: 61  SITEIAPTGIESLPVNFALRAIIEKYQQ-EDHPDIVTCPEHYRQPLNVYCLLDKKLVCGH 119

Query: 117 CATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLT 176
           C T G+H  H    ++ AY +E+D  + L +        D    ++ L+  K  S +++ 
Sbjct: 120 CLTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKEQKSHSEKMIQ 179

Query: 177 KDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIA 236
            D + V ++F++L  TL+QKK   L+    +   + Q Y P+I ++  I ++Q     + 
Sbjct: 180 GDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIREQQLELMALT 239

Query: 237 EAFKDVSEPIVFLQQMQEFREKIKVIKETPLPP-SNLPASPLMKNFDTSQWEDIKLVDVD 295
            + ++ S P+ FL+++ + R+ ++++K+ PLP    +   P +      +W   ++  + 
Sbjct: 240 ISLQEES-PLKFLEKVDDVRQHVQILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIK 298

Query: 296 KLSLPQ 301
            + +P+
Sbjct: 299 NVLIPK 304


>gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo
           sapiens]
          Length = 500

 Score =  100 bits (248), Expect = 3e-21
 Identities = 68/234 (29%), Positives = 105/234 (44%), Gaps = 22/234 (9%)

Query: 2   ELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRP--APFKCPTCRK 59
           E ++E+LTCPIC   F DP  + C HNFC+ CL        RN  W P   PF CP CR 
Sbjct: 4   EDIQEELTCPICLDYFQDPVSIECGHNFCRGCLH-------RN--WAPGGGPFPCPECRH 54

Query: 60  ETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICAT 119
            ++     +L+ N++L  + EK  + ++ P  P   G   +PL +FC  D + +C +C  
Sbjct: 55  PSAPA---ALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRE 111

Query: 120 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 179
             EH  H    I++A+   R     +    + W+R     RL  L     K  + L K  
Sbjct: 112 SQEHQTHAMAPIDEAFESYRTGNFDI--HVDEWKR-----RLIRLLLYHSKQEEKLLKSQ 164

Query: 180 DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAF 233
             +    +K+ H  D +        + +K   M+    E +KL+  L E+   F
Sbjct: 165 RNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMR-ISTEFSKLHNFLVEEEDLF 217


>gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]
          Length = 353

 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 35/255 (13%)

Query: 1   MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 50
           ME LE+ L CPIC  +F  P V LPC HN C+KC   I + +  N  W            
Sbjct: 14  MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAA--NPYWTSRGSSVSMSGG 71

Query: 51  PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPKM-----PVCKGHLGQPLN 103
            F+CPTCR E      G+  LQ N  ++ I++ Y +   S  +     P+CK H  + +N
Sbjct: 72  RFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKIN 131

Query: 104 IFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDT 163
           I+CLT     C +C   G H       ++  +  ++    +               R+ T
Sbjct: 132 IYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN-----DRVQT 186

Query: 164 LETSKRKSLQLLTKDSDKVKE----FFEKLQHTLDQKKNEIL---SDFETMKL----AVM 212
           + T    S ++  ++S +VKE     F+ L   LD+KK+E+L   +  +  KL    A++
Sbjct: 187 IITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALI 246

Query: 213 QAYDPEINKLNTILQ 227
           Q Y  +++K   +++
Sbjct: 247 QQYQEQLDKSTKLVE 261


>gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo
           sapiens]
          Length = 474

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 32/263 (12%)

Query: 2   ELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRP--APFKCPTCRK 59
           E ++E+LTCPIC   F DP  + C HNFC+ CL        RN  W P   PF CP CR 
Sbjct: 4   EDIQEELTCPICLDYFQDPVSIECGHNFCRGCLH-------RN--WAPGGGPFPCPECRH 54

Query: 60  ETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICAT 119
            ++     +L+ N++L  + EK  + ++ P  P   G   +PL +FC  D + +C +C  
Sbjct: 55  PSAPA---ALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRE 111

Query: 120 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 179
             EH  H    I++A+   R   E L +S     + + ++++  +   +   ++  T+  
Sbjct: 112 SQEHQTHAMAPIDEAFESYR---EKLLKS-----QRNLVAKMKKVMHLQDVEVKNATQWK 163

Query: 180 DKVKE-------FFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLN-TILQEQRM 231
           DK+K         F KL + L ++++  L      +    +  +    KLN TI   +++
Sbjct: 164 DKIKSQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKL 223

Query: 232 AFNIAEAFKDVSEPIVFLQQMQE 254
              + E  K  +  +  LQ  +E
Sbjct: 224 ILEVGE--KSQAPTLELLQNPKE 244


>gi|30023818 tripartite motif protein 50A [Homo sapiens]
          Length = 487

 Score = 96.7 bits (239), Expect = 3e-20
 Identities = 68/276 (24%), Positives = 126/276 (45%), Gaps = 22/276 (7%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
           LE+ L CPIC  +F +P +L C H++CK CL       V  S    A  +CP CR+  + 
Sbjct: 10  LEDWLQCPICLEVFKEPLMLQCGHSYCKGCL-------VSLSCHLDAELRCPVCRQ--AV 60

Query: 64  TGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGEH 123
            G +SL  N SL  ++E   ++   P+  VC  H   PL++FC  D +LICG+C   G H
Sbjct: 61  DGSSSLP-NVSLARVIEAL-RLPGDPEPKVCVHH-RNPLSLFCEKDQELICGLCGLLGSH 117

Query: 124 TKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD--- 180
             H    +   Y++ ++   +L    +  ++     ++D L      +   +  +SD   
Sbjct: 118 QHHPVTPVSTVYSRMKEELAALISELKQEQK-----KVDELIAKLVNNRTRIVNESDVFS 172

Query: 181 -KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF 239
             ++  F++L H +D++K   L         ++ + D ++ +     +    A  + E F
Sbjct: 173 WVIRREFQELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQF 232

Query: 240 KDVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPAS 275
            +  +   F+++      + ++ +  PL  +  P S
Sbjct: 233 GN-EDHHKFIRKFHSMASRAEMPQARPLEGAFSPIS 267


>gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]
          Length = 358

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 51/314 (16%)

Query: 1   MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 50
           M+ LE+ L CPIC  +F  P V LPC HN C+KC   + + S  N LW+           
Sbjct: 17  MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAS--NPLWQSRGSTTVSSGG 74

Query: 51  PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISP------KMPVCKGHLGQPL 102
            F+CP+CR E      G+  LQ N  ++ I++ Y +    P      +  +C+ H  + +
Sbjct: 75  RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKI 134

Query: 103 NIFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDAL 158
           NI+CL+     C +C   G H       +   Y +++    D    L    +  R    +
Sbjct: 135 NIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGND--RVQAVI 192

Query: 159 SRLD----TLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQA 214
           ++++    T+E + R+  QLL        + FE L   L+++K E+L        A+ + 
Sbjct: 193 TQMEEVCQTIEDNSRRQKQLL-------NQRFESLCAVLEERKGELLQ-------ALARE 238

Query: 215 YDPEINKLNTILQE-----QRMAFNIAEAFKDVSEP--IVFLQQMQEFREKIKVIKETPL 267
            + ++ ++  ++++     +  +  +  A + + EP   ++LQQ +E   K+  + +  L
Sbjct: 239 QEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVEL 298

Query: 268 PPSNLPASPLMKNF 281
                P    M+ F
Sbjct: 299 AGRPEPGYESMEQF 312


>gi|37622899 ring finger protein 137 [Homo sapiens]
          Length = 485

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 41/283 (14%)

Query: 1   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
           +E + E++ CPIC +   +P  + C H+FC  CL G+ E    +  W    + CP CR  
Sbjct: 7   VEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNW---GYTCPLCRAP 63

Query: 61  TSATGINSLQVNYSLKGIVEKYNKIKISPKM----PVCKGHLGQPLNIFCLTDMQLICGI 116
                  +L+ N+ L  +VEK   +++ P M     +C+ H G+ L +FC  D+ ++C  
Sbjct: 64  VQP---RNLRPNWQLANVVEKVRLLRLHPGMGLKGDLCERH-GEKLKMFCKEDVLIMCEA 119

Query: 117 CATRGEHTKHVFCSIED-AYAQERDAFESL----FQSFETWRRGDALSRLDTLETSKRK- 170
           C+   EH  H    +ED A+  + +  E+L     +  E W+          LE  +RK 
Sbjct: 120 CSQSPEHEAHSVVPMEDVAWEYKWELHEALEHLKKEQEEAWK----------LEVGERKR 169

Query: 171 ----SLQLLTKDSDKVKEFFEKLQHTLDQKK-------NEILSDFETMKLAVMQAYDP-E 218
                +Q+ T+    V E FEK Q  L++K+        E+ +   +++    +     E
Sbjct: 170 TATWKIQVETRKQSIVWE-FEKYQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQKLE 228

Query: 219 INKLNTILQEQRMAFNIAEAFKDVSEPIVF-LQQMQEFREKIK 260
           +N    I Q Q +   IAE  +    P+ + LQ +QE   + K
Sbjct: 229 LNHSELIQQSQVLWRMIAELKERSQRPVRWMLQDIQEVLNRSK 271


>gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]
          Length = 452

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 25/278 (8%)

Query: 1   MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGS-------VRNSLWRPAPF 52
           M+ LE+ L CPIC  +F  P V LPC HN C+KC   I + S          ++     F
Sbjct: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76

Query: 53  KCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPK----MPVCKGHLGQPLNIFC 106
           +CP+CR E      G+  LQ N  ++ I++ Y +    P+     P+C+ H  + +NI+C
Sbjct: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYC 136

Query: 107 LTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDALSRL- 161
           L      C +C   G H       +   + +++    D    L  S +  R    +S+L 
Sbjct: 137 LNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSND--RVQGVISQLE 194

Query: 162 DTLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINK 221
           DT +T +    +   K   ++ E F+ L   L+++KNE+       +   ++     I K
Sbjct: 195 DTCKTIE----ECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEHVRALIKK 250

Query: 222 LNTILQEQRMAFNIAEAFKDVSEPIVFLQQMQEFREKI 259
            +  L+           F D  E  VFLQ  +   +KI
Sbjct: 251 YSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKI 288


>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
          Length = 548

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 25/278 (8%)

Query: 1   MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGS-------VRNSLWRPAPF 52
           M+ LE+ L CPIC  +F  P V LPC HN C+KC   I + S          ++     F
Sbjct: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76

Query: 53  KCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPK----MPVCKGHLGQPLNIFC 106
           +CP+CR E      G+  LQ N  ++ I++ Y +    P+     P+C+ H  + +NI+C
Sbjct: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYC 136

Query: 107 LTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDALSRL- 161
           L      C +C   G H       +   + +++    D    L  S +  R    +S+L 
Sbjct: 137 LNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSND--RVQGVISQLE 194

Query: 162 DTLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINK 221
           DT +T +    +   K   ++ E F+ L   L+++KNE+       +   ++     I K
Sbjct: 195 DTCKTIE----ECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEHVRALIKK 250

Query: 222 LNTILQEQRMAFNIAEAFKDVSEPIVFLQQMQEFREKI 259
            +  L+           F D  E  VFLQ  +   +KI
Sbjct: 251 YSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKI 288


>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
          Length = 540

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 25/278 (8%)

Query: 1   MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGS-------VRNSLWRPAPF 52
           M+ LE+ L CPIC  +F  P V LPC HN C+KC   I + S          ++     F
Sbjct: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76

Query: 53  KCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPK----MPVCKGHLGQPLNIFC 106
           +CP+CR E      G+  LQ N  ++ I++ Y +    P+     P+C+ H  + +NI+C
Sbjct: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYC 136

Query: 107 LTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDALSRL- 161
           L      C +C   G H       +   + +++    D    L  S +  R    +S+L 
Sbjct: 137 LNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSND--RVQGVISQLE 194

Query: 162 DTLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINK 221
           DT +T +    +   K   ++ E F+ L   L+++KNE+       +   ++     I K
Sbjct: 195 DTCKTIE----ECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEHVRALIKK 250

Query: 222 LNTILQEQRMAFNIAEAFKDVSEPIVFLQQMQEFREKI 259
            +  L+           F D  E  VFLQ  +   +KI
Sbjct: 251 YSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKI 288


>gi|217035095 tripartite motif-containing 62 [Homo sapiens]
          Length = 475

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 35/318 (11%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
           L+++L C IC S++ DP  L C H FC++C   I E  VR          CP CR+  + 
Sbjct: 5   LKDELLCSICLSIYQDPVSLGCEHYFCRRC---ITEHWVRQE--AQGARDCPECRRTFAE 59

Query: 64  TGINSLQVNYSLKGIVEKYNKIKISPKMPV------CKGHLGQPLNIFCLTDMQLICGIC 117
               +L  +  L  IVE+Y+   +   +        C+ H    + +FCLTD  L+C  C
Sbjct: 60  P---ALAPSLKLANIVERYSSFPLDAILNARRAARPCQAH--DKVKLFCLTDRALLCFFC 114

Query: 118 ATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTK 177
                H +H    I+DA+ + +   +   Q+ +   R       + L+  KR+  +  TK
Sbjct: 115 DEPALHEQHQVTGIDDAFDELQRELKDQLQALQDSER----EHTEALQLLKRQLAE--TK 168

Query: 178 DSDK-----VKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMA 232
            S K     + E FE+L   L +++  +L + E      +   + ++ + +  L++ +  
Sbjct: 169 SSTKSLRTTIGEAFERLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEG 228

Query: 233 FNIAEAFKDVSEPIVFLQQMQEFREKIK-VIKETPLPPSNLPAS----PLMKNFDTSQWE 287
             I +     ++   FL  +    E++K  I ET L   + P S    PL      S ++
Sbjct: 229 AQILQERLAETDRHTFLAGVASLSERLKGKIHETNLTYEDFPTSKYTGPLQYTIWKSLFQ 288

Query: 288 DIKLVDVDKLSLPQDTGT 305
           DI  V     +L  D GT
Sbjct: 289 DIHPVPA---ALTLDPGT 303


>gi|56605981 tripartite motif-containing 72 [Homo sapiens]
          Length = 477

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 27/276 (9%)

Query: 3   LLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETS 62
           LL ++L+CP+C  LFD P    C H+FC+ CL     G V           CP C+  T 
Sbjct: 7   LLHQELSCPLCLQLFDAPVTAECGHSFCRACL-----GRVAGEPAADGTVLCPCCQAPTR 61

Query: 63  ATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGE 122
                +L  N  L  +VE   ++        C+ HL  PL+I+C  D  L+CG+CA+ G 
Sbjct: 62  P---QALSTNLQLARLVEGLAQV----PQGHCEEHL-DPLSIYCEQDRALVCGVCASLGS 113

Query: 123 HTKHVFCSIEDAYAQERDAF-ESLFQSFETWRRGDAL-----SRLDTLETSKRKSLQLLT 176
           H  H      +A+A+ +    +   Q  E   R +        +L  +E + R+    + 
Sbjct: 114 HRGHRLLPAAEAHARLKTQLPQQKLQLQEACMRKEKSVAVLEHQLVEVEETVRQFRGAVG 173

Query: 177 KDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIA 236
           +   K++ F   L+ +LD        + E ++     A   E+  LN+ L++ R    + 
Sbjct: 174 EQLGKMRVFLAALEGSLD-------CEAERVRGEAGVALRRELGSLNSYLEQLRQMEKVL 226

Query: 237 EAFKDVSEPIVFLQQMQEFREKIKVIKETPLPPSNL 272
           E   D  +    ++         K++ E+P PP+ L
Sbjct: 227 EEVADKPQTEFLMKYCLVTSRLQKILAESP-PPARL 261


>gi|65285121 tripartite motif-containing 73 [Homo sapiens]
          Length = 250

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 21/240 (8%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
           LE+ L CPIC  +F +  +L C H++CK CL  +       S       +CP C +    
Sbjct: 10  LEDRLQCPICLEVFKESLMLQCGHSYCKGCLVSL-------SYHLDTKVRCPMCWQVVD- 61

Query: 64  TGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGEH 123
            G +SL  N SL  ++E   ++   P+  VC  H   PL++FC  D +LICG+C   G H
Sbjct: 62  -GSSSLP-NVSLAWVIEAL-RLPGDPEPKVCVHHRN-PLSLFCEKDQELICGLCGLLGSH 117

Query: 124 TKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD--- 180
             H    +    ++ ++   +LF   +  ++     ++D L     K+   +  +SD   
Sbjct: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQK-----KVDELIAKLVKNRTRIVNESDVFS 172

Query: 181 -KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF 239
             ++  F++L+H +D++K   L         ++ + D ++ +     +    A  + E F
Sbjct: 173 WVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQF 232


>gi|38524612 tripartite motif-containing 74 [Homo sapiens]
          Length = 250

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 21/240 (8%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
           LE+ L CPIC  +F +  +L C H++CK CL  +       S       +CP C +    
Sbjct: 10  LEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSL-------SYHLDTKVRCPMCWQVVD- 61

Query: 64  TGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGEH 123
            G +SL  N SL  ++E   ++   P+  VC  H   PL++FC  D +LICG+C   G H
Sbjct: 62  -GSSSLP-NVSLAWVIEAL-RLPGDPEPKVCVHHRN-PLSLFCEKDQELICGLCGLLGSH 117

Query: 124 TKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD--- 180
             H    +    ++ ++   +LF   +  ++     ++D L     K+   +  +SD   
Sbjct: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQK-----KVDELIAKLVKNRTRIVNESDVFS 172

Query: 181 -KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF 239
             ++  F++L+H +D++K   L         ++ + D ++ +     +    A  + E F
Sbjct: 173 WVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQF 232


>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
          Length = 488

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 18/218 (8%)

Query: 1   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
           +E L+ + +C +C     +P ++ C HNFCK C+    E   R+       F CP CRK 
Sbjct: 20  LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERD-------FPCPVCRK- 71

Query: 61  TSATGINSLQVNYSLKGIVEKYNKIKISPKM----PVCKGHLGQPLNIFCLTDMQLICGI 116
              +   SL+ N  L  +VE   +++   +      +C  H  + L++FC  D + +C I
Sbjct: 72  --TSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQH-HEALSLFCYEDQEAVCLI 128

Query: 117 CATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLT 176
           CA    H  H    ++DA  + ++  +   +  E  ++   ++R  + E  K   L+ L 
Sbjct: 129 CAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLE--QKLQEITRCKSSEEKKPGELKRLV 186

Query: 177 KD-SDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQ 213
           +    ++   FE+L   LD+++  +LS  E  +  ++Q
Sbjct: 187 ESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQ 224


>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
          Length = 518

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 18/218 (8%)

Query: 1   MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
           +E L+ + +C +C     +P ++ C HNFCK C+    E   R+       F CP CRK 
Sbjct: 20  LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERD-------FPCPVCRK- 71

Query: 61  TSATGINSLQVNYSLKGIVEKYNKIKISPKM----PVCKGHLGQPLNIFCLTDMQLICGI 116
              +   SL+ N  L  +VE   +++   +      +C  H  + L++FC  D + +C I
Sbjct: 72  --TSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQH-HEALSLFCYEDQEAVCLI 128

Query: 117 CATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLT 176
           CA    H  H    ++DA  + ++  +   +  E  ++   ++R  + E  K   L+ L 
Sbjct: 129 CAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLE--QKLQEITRCKSSEEKKPGELKRLV 186

Query: 177 KD-SDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQ 213
           +    ++   FE+L   LD+++  +LS  E  +  ++Q
Sbjct: 187 ESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQ 224


>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
          Length = 468

 Score = 85.5 bits (210), Expect = 8e-17
 Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 21/274 (7%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRP-APFKCPTCRKETS 62
           L+E+ TC IC   F DP +  C HNFC++C        +R    +P  P+ CP CR+ + 
Sbjct: 10  LQEEATCAICLDYFTDPVMTDCGHNFCREC--------IRRCWGQPEGPYACPECRELSP 61

Query: 63  ATGINSLQVNYSLKGIVEKYNKIKISPKMP--VCKGHLGQPLNIFCLTDMQLICGICATR 120
                +L+ N  L  + E   ++     +P  VC  H  +PL  FC  +++L+C  C   
Sbjct: 62  Q---RNLRPNRPLAKMAEMARRLHPPSPVPQGVCPAH-REPLAAFCGDELRLLCAACERS 117

Query: 121 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 180
           GEH  H    ++DA    +   E   +      +   L +    ET      +++     
Sbjct: 118 GEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCVLWQ-KMVESQRQ 176

Query: 181 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 240
            V   FE+L+  L +++ ++L   E  +L V+         L    Q   +A  IAE   
Sbjct: 177 NVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQ--QSAHLAELIAELEG 234

Query: 241 DVSEPIVFLQQMQEFREKIKVIKETPL-PPSNLP 273
               P + L  +Q+ ++ ++ +++  L PP  +P
Sbjct: 235 RCQLPALGL--LQDIKDALRRVQDVKLQPPEVVP 266


>gi|22749269 ring finger protein 129 [Homo sapiens]
          Length = 471

 Score = 85.5 bits (210), Expect = 8e-17
 Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 28/271 (10%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPA--PFKCPTCRKET 61
           L+E+ +CPIC     DP  + C HNFC+ CL         +  W+     F CP CR   
Sbjct: 10  LQEESSCPICLEYLKDPVTINCGHNFCRSCL---------SVSWKDLDDTFPCPVCR--- 57

Query: 62  SATGINSLQVNYSLKGIVE-------KYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLIC 114
                 S + N  L+ + E       + +K K   +  +C+ H  Q L +FC+ D++++C
Sbjct: 58  FCFPYKSFRRNPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKH-NQFLTLFCVKDLEILC 116

Query: 115 GICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRG-DALSRLDTLETSKRKSLQ 173
             C+   +H KH  C I+ A +  R+  E    S E  R   + + ++  L+ SK   L+
Sbjct: 117 TQCSFSTKHQKHYICPIKKAASYHREILEG---SLEPLRNNIERVEKVIILQGSKSVELK 173

Query: 174 LLTK-DSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMA 232
              +   +++   FE+++  L  ++  IL   +  ++ ++   +  + +L+  +   +  
Sbjct: 174 KKVEYKREEINSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNENLVELSDYVSTLKHL 233

Query: 233 FNIAEAFKDVSEPIVFLQQMQEFREKIKVIK 263
               E  K V   +  L Q +    K + +K
Sbjct: 234 LREVEG-KSVQSNLELLTQAKSMHHKYQNLK 263


>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
          Length = 400

 Score = 85.5 bits (210), Expect = 8e-17
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 75/347 (21%)

Query: 1   MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 50
           M+ LE+ L CPIC  +F  P V LPC HN C+KC   + + S  N LW+           
Sbjct: 17  MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAS--NPLWQSRGSTTVSSGG 74

Query: 51  PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISP------KMPVCKGHLGQPL 102
            F+CP+CR E      G+  LQ N  ++ I++ Y +    P      +  +C+ H  + +
Sbjct: 75  RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKI 134

Query: 103 NIFCLTDMQLICGICATRGEH------------------------------TKHVFCSIE 132
           NI+CL+     C +C   G H                              T   +CS++
Sbjct: 135 NIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKKQDLTLLPRLECSGTNTTYCSLD 194

Query: 133 DAYAQERDAFESLFQSFETWRRGDALS-------RLDTLETSKRKSLQLLTKDSDKVKEF 185
              + +     S           D ++       R+  + T   +  Q +  +S + K+ 
Sbjct: 195 LPSSSDPPILASQNTKIIDSELSDGIAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQL 254

Query: 186 ----FEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQE-----QRMAFNIA 236
               FE L   L+++K E+L        A+ +  + ++ ++  ++++     +  +  + 
Sbjct: 255 LNQRFESLCAVLEERKGELLQ-------ALAREQEEKLQRVRGLIRQYGDHLEASSKLVE 307

Query: 237 EAFKDVSEP--IVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNF 281
            A + + EP   ++LQQ +E   K+  + +  L     P    M+ F
Sbjct: 308 SAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQF 354


>gi|117938316 tripartite motif-containing 22 [Homo sapiens]
          Length = 498

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 12/213 (5%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
           +E+++TCPIC  L  +P  L C H+FC+ C+   ++ SV  S    +   CP C+     
Sbjct: 9   IEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESS---CPVCQTRFQP 65

Query: 64  TGINSLQVNYSLKGIVEKYNKIKISP----KMPVCKGHLGQPLNIFCLTDMQLICGICAT 119
               +L+ N  L  IVE+  ++K+SP    K  VC+ H G+ L IFC  D ++IC +C  
Sbjct: 66  ---GNLRPNRHLANIVERVKEVKMSPQEGQKRDVCEHH-GKKLQIFCKEDGKVICWVCEL 121

Query: 120 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 179
             EH  H    I +   + ++  +   Q        +A    D +   +      +  + 
Sbjct: 122 SQEHQGHQTFRINEVVKECQEKLQVALQRL-IKEDQEAEKLEDDIRQERTAWKNYIQIER 180

Query: 180 DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVM 212
            K+ + F +++  LD ++   L   E  ++ V+
Sbjct: 181 QKILKGFNEMRVILDNEEQRELQKLEEGEVNVL 213


>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
          Length = 488

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 78/337 (23%), Positives = 146/337 (43%), Gaps = 40/337 (11%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
           ++E++TCPIC  L  +P  L C H+ C+ C+    + +V +   + +   CP C    S 
Sbjct: 9   VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSS---CPVCGISYS- 64

Query: 64  TGINSLQVNYSLKGIVEKYNKIKISP----KMPVCKGHLGQPLNIFCLTDMQLICGICAT 119
                LQ N  L  IVE+  ++K+SP    K  +C  H G+ L +FC  D ++IC +C  
Sbjct: 65  --FEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHH-GEKLLLFCKEDRKVICWLCER 121

Query: 120 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 179
             EH  H     E+ + + ++  +++ +  +           D  E       Q+ T + 
Sbjct: 122 SQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQT-ER 180

Query: 180 DKVKEFFEKLQHTL---DQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQ------R 230
            +++  F++L+  L   +Q++ + L + E   L      + E+ +   +++E       R
Sbjct: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240

Query: 231 MAFNIAEAFKDVS-----EPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFD--- 282
             ++  E  +D+S       I  L++ +   +K+K +   P        S +++ F    
Sbjct: 241 SQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAP------DLSRMLQMFRELT 294

Query: 283 --TSQWEDIKLVDVD---KLSLPQDTGTFISKIPWSF 314
                W D+ L  V+    L L +D    IS   W F
Sbjct: 295 AVRCYWVDVTLNSVNLNLNLVLSEDQRQVISVPIWPF 331


>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
          Length = 488

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 78/337 (23%), Positives = 146/337 (43%), Gaps = 40/337 (11%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
           ++E++TCPIC  L  +P  L C H+ C+ C+    + +V +   + +   CP C    S 
Sbjct: 9   VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSS---CPVCGISYS- 64

Query: 64  TGINSLQVNYSLKGIVEKYNKIKISP----KMPVCKGHLGQPLNIFCLTDMQLICGICAT 119
                LQ N  L  IVE+  ++K+SP    K  +C  H G+ L +FC  D ++IC +C  
Sbjct: 65  --FEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHH-GEKLLLFCKEDRKVICWLCER 121

Query: 120 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 179
             EH  H     E+ + + ++  +++ +  +           D  E       Q+ T + 
Sbjct: 122 SQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQT-ER 180

Query: 180 DKVKEFFEKLQHTL---DQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQ------R 230
            +++  F++L+  L   +Q++ + L + E   L      + E+ +   +++E       R
Sbjct: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240

Query: 231 MAFNIAEAFKDVS-----EPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFD--- 282
             ++  E  +D+S       I  L++ +   +K+K +   P        S +++ F    
Sbjct: 241 SQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAP------DLSRMLQMFRELT 294

Query: 283 --TSQWEDIKLVDVD---KLSLPQDTGTFISKIPWSF 314
                W D+ L  V+    L L +D    IS   W F
Sbjct: 295 AVRCYWVDVTLNSVNLNLNLVLSEDQRQVISVPIWPF 331


>gi|51477690 tripartite motif-containing 6 and tripartite
           motif-containing 34 [Homo sapiens]
          Length = 842

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 78/337 (23%), Positives = 146/337 (43%), Gaps = 40/337 (11%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
           ++E++TCPIC  L  +P  L C H+ C+ C+    + +V +   + +   CP C    S 
Sbjct: 363 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSS---CPVCGISYS- 418

Query: 64  TGINSLQVNYSLKGIVEKYNKIKISP----KMPVCKGHLGQPLNIFCLTDMQLICGICAT 119
                LQ N  L  IVE+  ++K+SP    K  +C  H G+ L +FC  D ++IC +C  
Sbjct: 419 --FEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHH-GEKLLLFCKEDRKVICWLCER 475

Query: 120 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 179
             EH  H     E+ + + ++  +++ +  +           D  E       Q+ T + 
Sbjct: 476 SQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQT-ER 534

Query: 180 DKVKEFFEKLQHTL---DQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQ------R 230
            +++  F++L+  L   +Q++ + L + E   L      + E+ +   +++E       R
Sbjct: 535 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 594

Query: 231 MAFNIAEAFKDVS-----EPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFD--- 282
             ++  E  +D+S       I  L++ +   +K+K +   P        S +++ F    
Sbjct: 595 SQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAP------DLSRMLQMFRELT 648

Query: 283 --TSQWEDIKLVDVD---KLSLPQDTGTFISKIPWSF 314
                W D+ L  V+    L L +D    IS   W F
Sbjct: 649 AVRCYWVDVTLNSVNLNLNLVLSEDQRQVISVPIWPF 685



 Score = 75.5 bits (184), Expect = 8e-14
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 21/254 (8%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
           + E++TCPIC  L  +P  + C H+FC+ C   I      + + +     CP C+     
Sbjct: 37  IREEVTCPICLELLTEPLSIDCGHSFCQAC---ITPNGRESVIGQEGERSCPVCQTSYQP 93

Query: 64  TGINSLQVNYSLKGIVEKYNKIKISP----KMPVCKGHLGQPLNIFCLTDMQLICGICAT 119
               +L+ N  L  IV +  ++ + P    K  +C  H G+ L +FC  D ++IC +C  
Sbjct: 94  ---GNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADH-GEKLQLFCQEDGKVICWLCER 149

Query: 120 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 179
             EH  H    +E+   + ++ F+   +  +     +A      +   K      +  + 
Sbjct: 150 SQEHRGHHTFLVEEVAQEYQEKFQESLKKLKN-EEQEAEKLTAFIREKKTSWKNQMEPER 208

Query: 180 DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQ---------EQR 230
            +++  F +L++ LD+ +   L   E  +   ++  +   N L    Q         E+R
Sbjct: 209 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR 268

Query: 231 MAFNIAEAFKDVSE 244
              +  E  +DVS+
Sbjct: 269 CQGSTMELLQDVSD 282


>gi|62865604 tripartite motif protein 31 [Homo sapiens]
          Length = 425

 Score = 82.4 bits (202), Expect = 7e-16
 Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 35/209 (16%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
           L+E++ CPIC  +   P  + C HNFC KC+  I E S          FKCP C+   ++
Sbjct: 10  LQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSC-------GFFKCPLCK---TS 59

Query: 64  TGINSLQVNYSLKGIVEKYNKIKISP-----KMPVCKGHLGQPLNIFCLTDMQLICGICA 118
              N+++ N  L+ +VEK   ++ S      K   C  H  +  + FC  D + +C +C 
Sbjct: 60  VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEATCPRH-QEMFHYFCEDDGKFLCFVCR 118

Query: 119 TRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKD 178
              +H  H    IE+A            Q+++    G    ++  L+  +++++Q+  + 
Sbjct: 119 ESKDHKSHNVSLIEEA-----------AQNYQ----GQIQEQIQVLQQKEKETVQVKAQG 163

Query: 179 SDKVKEFFEKLQHTLDQKKNEILSDFETM 207
             +V  F ++++H    +K  IL++FE +
Sbjct: 164 VHRVDVFTDQVEH----EKQRILTEFELL 188


>gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]
          Length = 511

 Score = 82.4 bits (202), Expect = 7e-16
 Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 36/300 (12%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILE----GSVRNSLWRPA-PFKCPTCR 58
           L+ + TC IC  LF +P  + C H+FC+ C+    E    GSV  +   P  P  CP CR
Sbjct: 23  LQGEATCSICLELFREPVSVECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLPCPQCR 82

Query: 59  KETSATGINSLQVNYSLKGIVEKYNKIKISPKMP--------------VCKGHLGQPLNI 104
           +       + L+ N  L  +     +  +    P                 G  G+P  +
Sbjct: 83  EPARP---SQLRPNRQLAAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKL 139

Query: 105 FCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTL 164
           +C  D + IC +C    EH +H    +++A  + ++  ES  +  +       + R    
Sbjct: 140 YCQDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFR---- 195

Query: 165 ETSKRKSLQLLTK---DSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINK 221
            T K++S +LL +   + +KV   F+ L+  L +++  +L   E +   V Q  +  + +
Sbjct: 196 STEKKESKELLKQMAAEQEKVGAEFQALRAFLVEQEGRLLGRLEELSREVAQKQNENLAQ 255

Query: 222 LNT-ILQEQRMAFNIAEAFKDVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKN 280
           L   I Q  +++  I E  +        L  +QEF+  +      P P     +S  MKN
Sbjct: 256 LGVEITQLSKLSSQIQETAQKPD-----LDFLQEFKSTLSRCSNVPGPKPTTVSSE-MKN 309


>gi|157426898 tripartite motif-containing 10 isoform 1 [Homo
           sapiens]
          Length = 481

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 23/222 (10%)

Query: 4   LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
           L +++ CPIC     +P  + C HNFC+ CL    E  +       +P  CP C KE   
Sbjct: 10  LADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCE--IPGPDLEESP-TCPLC-KEPFR 65

Query: 64  TGINSLQVNYSLKGIVEKYNKIKISPKM-----PVCKGHLGQPLNIFCLTDMQLICGICA 118
            G  S + N+ L  +VE   ++++   +      VC+ H G+ +  FC  D   +C +C 
Sbjct: 66  PG--SFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEH-GEKIYFFCEDDEMQLCVVCR 122

Query: 119 TRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQ-LLTK 177
             GEH  H    +EDA A  R+      +     R       +  +++ + K +Q LLT+
Sbjct: 123 EAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKER-----EEIQEIQSRENKRMQVLLTQ 177

Query: 178 DSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEI 219
            S K ++   +  H       + L + +++ LA +++ D +I
Sbjct: 178 VSTKRQQVISEFAHL-----RKFLEEQQSILLAQLESQDGDI 214


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,448,006
Number of Sequences: 37866
Number of extensions: 687596
Number of successful extensions: 3182
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 2678
Number of HSP's gapped (non-prelim): 489
length of query: 407
length of database: 18,247,518
effective HSP length: 105
effective length of query: 302
effective length of database: 14,271,588
effective search space: 4310019576
effective search space used: 4310019576
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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