Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DBNL Sequence: fasta or formatted (439aa) NCBI GI: 171906575
Description:

drebrin-like isoform c

Referenced in:

Cytoskeleton
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [431aa] drebrin-like isoform a
alt prot [430aa] drebrin-like isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         42           3
 C cysteine            1.4          6           1
 D aspartate           3.4         15           2
 E glutamate          13.0         57           3
 F phenylalanine       3.2         14           1
 G glycine             7.7         34           2
 H histidine           2.1          9           2
 I isoleucine          3.4         15           1
 K lysine              4.3         19           1
 L leucine             5.2         23           1
 M methionine          1.6          7           1
 N asparagine          3.6         16           1
 P proline             6.2         27           2
 Q glutamine           7.1         31           3
 R arginine            7.1         31           2
 S serine              6.8         30           2
 T threonine           4.1         18           2
 V valine              6.2         27           2
 W tryptophan          1.4          6           2
 Y tyrosine            2.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   drebrin-like isoform c 
DBNL                  0.973   drebrin-like isoform a 
DBNL                  0.967   drebrin-like isoform b 
DBN1                  0.224   drebrin 1 isoform a 
DBN1                  0.206   drebrin 1 isoform b 
HCLS1                 0.089   hematopoietic cell-specific Lyn substrate 1 
CTTN                  0.085   cortactin isoform a 
CTTN                  0.085   cortactin isoform b 
LASP1                 0.043   LIM and SH3 protein 1 
ITSN2                 0.043   intersectin 2 isoform 3 
ITSN2                 0.043   intersectin 2 isoform 1 
ITSN2                 0.043   intersectin 2 isoform 2 
MAP7D1                0.037   MAP7 domain containing 1 
NEB                   0.036   nebulin 
NEBL                  0.035   nebulette non-muscle isoform 
MAP4K4                0.035   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.035   mitogen-activated protein kinase kinase kinase kinas...
EIF5B                 0.033   eukaryotic translation initiation factor 5B 
MYO10                 0.032   myosin X 
SH3GL2                0.032   SH3-domain GRB2-like 2 
NEBL                  0.032   nebulette sarcomeric isoform 
PACSIN2               0.032   protein kinase C and casein kinase substrate in neu...
INCENP                0.031   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.031   inner centromere protein antigens 135/155kDa isofor...
STAM                  0.031   signal transducing adaptor molecule 1 
MAP4K4                0.031   mitogen-activated protein kinase kinase kinase kinas...
ITSN1                 0.031   intersectin 1 isoform ITSN-s 
ITSN1                 0.031   intersectin 1 isoform ITSN-l 
LOC100130174          0.030   PREDICTED: hypothetical protein 
LOC100130174          0.030   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press