Guide to the Human Genome
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Name: DBNL Sequence: fasta or formatted (430aa) NCBI GI: 62198235
Description:

drebrin-like isoform b

Referenced in:

Cytoskeleton
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [439aa] drebrin-like isoform c
alt prot [431aa] drebrin-like isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         41           3
 C cysteine            1.2          5           1
 D aspartate           3.5         15           2
 E glutamate          13.3         57           3
 F phenylalanine       3.3         14           1
 G glycine             7.7         33           2
 H histidine           2.1          9           2
 I isoleucine          3.5         15           1
 K lysine              4.4         19           1
 L leucine             5.1         22           1
 M methionine          1.6          7           1
 N asparagine          3.7         16           1
 P proline             6.3         27           2
 Q glutamine           7.0         30           3
 R arginine            7.2         31           2
 S serine              6.3         27           2
 T threonine           4.0         17           2
 V valine              6.3         27           2
 W tryptophan          1.4          6           2
 Y tyrosine            2.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   drebrin-like isoform b 
DBNL                  0.994   drebrin-like isoform a 
DBNL                  0.986   drebrin-like isoform c 
DBN1                  0.224   drebrin 1 isoform a 
DBN1                  0.204   drebrin 1 isoform b 
HCLS1                 0.094   hematopoietic cell-specific Lyn substrate 1 
CTTN                  0.090   cortactin isoform a 
CTTN                  0.090   cortactin isoform b 
ITSN2                 0.046   intersectin 2 isoform 3 
ITSN2                 0.046   intersectin 2 isoform 1 
ITSN2                 0.046   intersectin 2 isoform 2 
LASP1                 0.045   LIM and SH3 protein 1 
MAP7D1                0.042   MAP7 domain containing 1 
NEB                   0.037   nebulin 
INCENP                0.037   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.037   inner centromere protein antigens 135/155kDa isofor...
NEBL                  0.034   nebulette non-muscle isoform 
MAP4K4                0.034   mitogen-activated protein kinase kinase kinase kinas...
SH3GL2                0.033   SH3-domain GRB2-like 2 
NEBL                  0.033   nebulette sarcomeric isoform 
MAP4K4                0.033   mitogen-activated protein kinase kinase kinase kinas...
PACSIN2               0.033   protein kinase C and casein kinase substrate in neu...
LOC400352             0.032   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.032   PREDICTED: similar to Putative golgin subfamily A m...
STAM                  0.032   signal transducing adaptor molecule 1 
PRKCSH                0.032   protein kinase C substrate 80K-H isoform 2 
MAP4K4                0.032   mitogen-activated protein kinase kinase kinase kinas...
ARHGEF4               0.032   Rho guanine nucleotide exchange factor 4 isoform a [...
ARHGEF4               0.032   Rho guanine nucleotide exchange factor 4 isoform b [...
PACSIN1               0.031   protein kinase C and casein kinase substrate in neur...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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