Guide to the Human Genome
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Name: CTTN Sequence: fasta or formatted (550aa) NCBI GI: 20357552
Description:

cortactin isoform a

Referenced in:

Actin and Related Proteins
Rho and Rac
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [513aa] cortactin isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         48           2
 C cysteine            0.5          3           1
 D aspartate           8.2         45           2
 E glutamate           9.8         54           2
 F phenylalanine       3.8         21           1
 G glycine             9.6         53           2
 H histidine           2.7         15           1
 I isoleucine          2.0         11           2
 K lysine              9.3         51           1
 L leucine             3.1         17           1
 M methionine          1.3          7           1
 N asparagine          1.8         10           1
 P proline             3.1         17           2
 Q glutamine           7.5         41           2
 R arginine            4.5         25           2
 S serine              7.5         41           2
 T threonine           4.0         22           1
 V valine              6.4         35           1
 W tryptophan          1.1          6           2
 Y tyrosine            5.1         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cortactin isoform a 
CTTN                  0.821   cortactin isoform b 
HCLS1                 0.329   hematopoietic cell-specific Lyn substrate 1 
DBNL                  0.071   drebrin-like isoform b 
DBNL                  0.070   drebrin-like isoform a 
DBNL                  0.068   drebrin-like isoform c 
LASP1                 0.037   LIM and SH3 protein 1 
NEB                   0.035   nebulin 
PACSIN1               0.034   protein kinase C and casein kinase substrate in neur...
SH3D19                0.033   SH3 domain containing 19 isoform c 
SH3D19                0.033   SH3 domain containing 19 isoform b 
SH3D19                0.033   SH3 domain containing 19 isoform a 
SH3KBP1               0.032   SH3-domain kinase binding protein 1 isoform a 
ABI2                  0.032   abl interactor 2 
NEBL                  0.031   nebulette sarcomeric isoform 
NEBL                  0.031   nebulette non-muscle isoform 
ITSN1                 0.030   intersectin 1 isoform ITSN-s 
ITSN1                 0.030   intersectin 1 isoform ITSN-l 
ABI1                  0.030   abl-interactor 1 isoform d 
ABI1                  0.030   abl-interactor 1 isoform c 
ABI1                  0.030   abl-interactor 1 isoform b 
ABI1                  0.030   abl-interactor 1 isoform a 
NCK1                  0.027   NCK adaptor protein 1 
SPTAN1                0.027   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.027   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
NCK2                  0.027   NCK adaptor protein 2 isoform A 
NCK2                  0.027   NCK adaptor protein 2 isoform A 
STAM                  0.027   signal transducing adaptor molecule 1 
KIAA1804              0.027   mixed lineage kinase 4 
MYO1E                 0.027   myosin IE 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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