LRRC20 30248

Name: LRRC20	Sequence: fasta or formatted (184aa)		NCBI GI: 46397369
Description: leucine rich repeat containing 20 isoform 1		Referenced in: Leucine-rich Repeat Family
Other entries for this name: alt prot [134aa] leucine rich repeat containing 20 isoform 2 alt prot [128aa] leucine rich repeat containing 20 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 16 2 C cysteine 0.5 1 1 D aspartate 3.3 6 1 E glutamate 8.7 16 2 F phenylalanine 4.3 8 1 G glycine 3.3 6 1 H histidine 2.2 4 1 I isoleucine 5.4 10 1 K lysine 5.4 10 2 L leucine 15.2 28 1 M methionine 3.3 6 1 N asparagine 6.0 11 2 P proline 6.5 12 2 Q glutamine 3.3 6 1 R arginine 5.4 10 1 S serine 6.5 12 1 T threonine 4.3 8 2 V valine 7.1 13 1 W tryptophan 0.0 0 0 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine rich repeat containing 20 isoform 1 LRRC20 0.640 leucine rich repeat containing 20 isoform 2 LRRC20 0.547 leucine rich repeat containing 20 isoform 3 LRSAM1 0.121 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.121 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.121 leucine rich repeat and sterile alpha motif containi... PODN 0.115 podocan LGR4 0.109 leucine-rich repeat-containing G protein-coupled re... MFHAS1 0.106 malignant fibrous histiocytoma amplified sequence 1... CHADL 0.106 chondroadherin-like LRRC57 0.100 leucine rich repeat containing 57 PHLPP1 0.100 PH domain and leucine rich repeat protein phosphatas... LRRC1 0.100 leucine rich repeat containing 1 LRRC40 0.100 leucine rich repeat containing 40 LOC401387 0.097 leucine-rich repeat and death domain-containing pro... LRRIQ4 0.097 leucine-rich repeats and IQ motif containing 4 [Hom... CNOT6 0.091 CCR4-NOT transcription complex, subunit 6 LRTM2 0.091 leucine-rich repeats and transmembrane domains 2 [Ho... SHOC2 0.091 soc-2 suppressor of clear homolog SCRIB 0.088 scribble isoform b SCRIB 0.088 scribble isoform a LRRC18 0.088 leucine rich repeat containing 18 LRG1 0.088 leucine-rich alpha-2-glycoprotein 1 CNOT6L 0.088 CCR4-NOT transcription complex, subunit 6-like [Hom... LRRC58 0.088 leucine rich repeat containing 58 LRCH3 0.088 leucine-rich repeats and calponin homology (CH) doma... LRRC59 0.085 leucine rich repeat containing 59 ISLR2 0.085 immunoglobulin superfamily containing leucine-rich ... ISLR2 0.085 immunoglobulin superfamily containing leucine-rich ... ISLR2 0.085 immunoglobulin superfamily containing leucine-rich r... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.