Search of human proteins with 46275837

Search of human proteins with 46275837

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|46275837 CCR4-NOT transcription complex, subunit 1 isoform b
[Homo sapiens]
         (1551 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46275837 CCR4-NOT transcription complex, subunit 1 isoform b ...  3112   0.0  
gi|42716275 CCR4-NOT transcription complex, subunit 1 isoform a ...  2952   0.0  
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]    46   2e-04
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]    46   2e-04
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]       39   0.039
gi|18079216 CASK interacting protein 1 [Homo sapiens]                  39   0.051
gi|116256363 transmembrane protease, serine 13 [Homo sapiens]          38   0.067
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]          37   0.11 
gi|188536004 zinc finger protein 469 [Homo sapiens]                    37   0.15 
gi|18677735 proline-rich coiled-coil 1 [Homo sapiens]                  37   0.19 
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]    36   0.25 
gi|126352608 elastin isoform e precursor [Homo sapiens]                36   0.33 
gi|126352446 elastin isoform d precursor [Homo sapiens]                36   0.33 
gi|126352322 elastin isoform c precursor [Homo sapiens]                36   0.33 
gi|126352700 elastin isoform b precursor [Homo sapiens]                36   0.33 
gi|126352440 elastin isoform a precursor [Homo sapiens]                36   0.33 
gi|38570081 CUG triplet repeat, RNA-binding protein 1 isoform 2 ...    36   0.33 
gi|11415052 retinoid X receptor, beta [Homo sapiens]                   35   0.43 
gi|39725717 coiled-coil domain containing 141 [Homo sapiens]           35   0.43 
gi|169167859 PREDICTED: hypothetical protein, partial [Homo sapi...    35   0.56 
gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]              35   0.74 
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    35   0.74 
gi|113417084 PREDICTED: hypothetical protein [Homo sapiens]            35   0.74 
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    34   0.96 
gi|157168329 formin 1 [Homo sapiens]                                   34   0.96 
gi|237858675 neurofascin isoform 1 precursor [Homo sapiens]            34   0.96 
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              34   0.96 
gi|87162461 fragile X mental retardation 2 [Homo sapiens]              34   0.96 
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    34   0.96 
gi|59710093 G-protein coupled receptor 112 [Homo sapiens]              34   0.96 

>gi|46275837 CCR4-NOT transcription complex, subunit 1 isoform b [Homo
            sapiens]
          Length = 1551

 Score = 3112 bits (8067), Expect = 0.0
 Identities = 1551/1551 (100%), Positives = 1551/1551 (100%)

Query: 1    MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD 60
            MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
Sbjct: 1    MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD 60

Query: 61   GKSSGKDFHQTQFLIQECALLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK 120
            GKSSGKDFHQTQFLIQECALLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
Sbjct: 61   GKSSGKDFHQTQFLIQECALLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK 120

Query: 121  LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV 180
            LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
Sbjct: 121  LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV 180

Query: 181  LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL 240
            LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
Sbjct: 181  LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL 240

Query: 241  PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIVQFGVREVTAAQVARVLGMMART 300
            PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIVQFGVREVTAAQVARVLGMMART
Sbjct: 241  PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIVQFGVREVTAAQVARVLGMMART 300

Query: 301  HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE 360
            HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
Sbjct: 301  HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE 360

Query: 361  LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC 420
            LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
Sbjct: 361  LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC 420

Query: 421  FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC 480
            FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
Sbjct: 421  FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC 480

Query: 481  PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH 540
            PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
Sbjct: 481  PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH 540

Query: 541  AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW 600
            AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
Sbjct: 541  AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW 600

Query: 601  LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG 660
            LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
Sbjct: 601  LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG 660

Query: 661  SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSL 720
            SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSL
Sbjct: 661  SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSL 720

Query: 721  SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG 780
            SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
Sbjct: 721  SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG 780

Query: 781  LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF 840
            LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
Sbjct: 781  LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF 840

Query: 841  SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR 900
            SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
Sbjct: 841  SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR 900

Query: 901  FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR 960
            FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
Sbjct: 901  FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR 960

Query: 961  FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA 1020
            FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
Sbjct: 961  FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA 1020

Query: 1021 QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV 1080
            QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
Sbjct: 1021 QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV 1080

Query: 1081 ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS 1140
            ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
Sbjct: 1081 ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS 1140

Query: 1141 IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG 1200
            IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
Sbjct: 1141 IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG 1200

Query: 1201 MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM 1260
            MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
Sbjct: 1201 MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM 1260

Query: 1261 AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK 1320
            AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
Sbjct: 1261 AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK 1320

Query: 1321 KDVKQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI 1380
            KDVKQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
Sbjct: 1321 KDVKQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI 1380

Query: 1381 PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA 1440
            PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
Sbjct: 1381 PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA 1440

Query: 1441 AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRVSWLFPWYRYKTYYCLSVIIFF 1500
            AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRVSWLFPWYRYKTYYCLSVIIFF
Sbjct: 1441 AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRVSWLFPWYRYKTYYCLSVIIFF 1500

Query: 1501 FVYIWHWALPLILNNHHICLMSSIILDCNSVRQSIMSVCFFFFLLYSQHDV 1551
            FVYIWHWALPLILNNHHICLMSSIILDCNSVRQSIMSVCFFFFLLYSQHDV
Sbjct: 1501 FVYIWHWALPLILNNHHICLMSSIILDCNSVRQSIMSVCFFFFLLYSQHDV 1551


>gi|42716275 CCR4-NOT transcription complex, subunit 1 isoform a [Homo
            sapiens]
          Length = 2376

 Score = 2952 bits (7654), Expect = 0.0
 Identities = 1478/1480 (99%), Positives = 1479/1480 (99%)

Query: 1    MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD 60
            MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
Sbjct: 1    MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD 60

Query: 61   GKSSGKDFHQTQFLIQECALLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK 120
            GKSSGKDFHQTQFLIQECALLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
Sbjct: 61   GKSSGKDFHQTQFLIQECALLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK 120

Query: 121  LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV 180
            LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
Sbjct: 121  LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV 180

Query: 181  LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL 240
            LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
Sbjct: 181  LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL 240

Query: 241  PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIVQFGVREVTAAQVARVLGMMART 300
            PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIVQFGVREVTAAQVARVLGMMART
Sbjct: 241  PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIVQFGVREVTAAQVARVLGMMART 300

Query: 301  HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE 360
            HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
Sbjct: 301  HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE 360

Query: 361  LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC 420
            LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
Sbjct: 361  LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC 420

Query: 421  FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC 480
            FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
Sbjct: 421  FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC 480

Query: 481  PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH 540
            PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
Sbjct: 481  PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH 540

Query: 541  AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW 600
            AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
Sbjct: 541  AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW 600

Query: 601  LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG 660
            LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
Sbjct: 601  LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG 660

Query: 661  SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSL 720
            SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSL
Sbjct: 661  SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSL 720

Query: 721  SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG 780
            SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
Sbjct: 721  SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG 780

Query: 781  LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF 840
            LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
Sbjct: 781  LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF 840

Query: 841  SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR 900
            SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
Sbjct: 841  SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR 900

Query: 901  FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR 960
            FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
Sbjct: 901  FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR 960

Query: 961  FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA 1020
            FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
Sbjct: 961  FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA 1020

Query: 1021 QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV 1080
            QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
Sbjct: 1021 QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV 1080

Query: 1081 ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS 1140
            ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
Sbjct: 1081 ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS 1140

Query: 1141 IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG 1200
            IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
Sbjct: 1141 IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG 1200

Query: 1201 MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM 1260
            MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
Sbjct: 1201 MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM 1260

Query: 1261 AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK 1320
            AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
Sbjct: 1261 AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK 1320

Query: 1321 KDVKQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI 1380
            KDVKQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
Sbjct: 1321 KDVKQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI 1380

Query: 1381 PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA 1440
            PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
Sbjct: 1381 PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA 1440

Query: 1441 AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRVS 1480
            AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALR +
Sbjct: 1441 AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTA 1480


>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
          Length = 1013

 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 55/216 (25%), Positives = 81/216 (37%), Gaps = 31/216 (14%)

Query: 663 SQELSETILTMVANCSNVMNKARQPPPGVMPK---GRPPSASSLDAISPVQI------DP 713
           SQ   E  L+   N    +     PPPG  P    G PPS  +    +P  I        
Sbjct: 431 SQGAPEAPLSPTLNTPAPVAMPASPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSG 490

Query: 714 LAGMTSLSIGGSAA---------PHTQSMQGFPPNLGSAFSTPQSPAKAFPPLST--PNQ 762
             G  + S GGS A         P     + +PP      +TP SPA A  P +   P  
Sbjct: 491 GGGSGTASTGGSQAASVITYTAPPRPPKKREYPPPPPEPAATPTSPATAVSPATAAGPAM 550

Query: 763 TTAFSGIGGLSSQL---------PVGGLGTGS--LTGIGTGALGLPAVNNDPFVQRKLGT 811
            T      G + +          PVGG+G G    TG G G   L A      +  ++G 
Sbjct: 551 ATTTEEAKGRNPRAGRTLTYTAKPVGGIGGGGGPPTGAGRGPSQLQAPPPLCQITVRIGE 610

Query: 812 SGLNQPTFQQSKMKPSDLSQVWPEANQHFSKEIDDE 847
             + +    ++ ++P +LS    E ++   +E D+E
Sbjct: 611 EAIVKRRISETDLRPGELSGEEMEESEEDEEEEDEE 646


>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
          Length = 1013

 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 55/216 (25%), Positives = 81/216 (37%), Gaps = 31/216 (14%)

Query: 663 SQELSETILTMVANCSNVMNKARQPPPGVMPK---GRPPSASSLDAISPVQI------DP 713
           SQ   E  L+   N    +     PPPG  P    G PPS  +    +P  I        
Sbjct: 431 SQGAPEAPLSPTLNTPAPVAMPASPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSG 490

Query: 714 LAGMTSLSIGGSAA---------PHTQSMQGFPPNLGSAFSTPQSPAKAFPPLST--PNQ 762
             G  + S GGS A         P     + +PP      +TP SPA A  P +   P  
Sbjct: 491 GGGSGTASTGGSQAASVITYTAPPRPPKKREYPPPPPEPAATPTSPATAVSPATAAGPAM 550

Query: 763 TTAFSGIGGLSSQL---------PVGGLGTGS--LTGIGTGALGLPAVNNDPFVQRKLGT 811
            T      G + +          PVGG+G G    TG G G   L A      +  ++G 
Sbjct: 551 ATTTEEAKGRNPRAGRTLTYTAKPVGGIGGGGGPPTGAGRGPSQLQAPPPLCQITVRIGE 610

Query: 812 SGLNQPTFQQSKMKPSDLSQVWPEANQHFSKEIDDE 847
             + +    ++ ++P +LS    E ++   +E D+E
Sbjct: 611 EAIVKRRISETDLRPGELSGEEMEESEEDEEEEDEE 646


>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
          Length = 4374

 Score = 38.9 bits (89), Expect = 0.039
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 1014 SIALAQAQ-AQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINT 1072
            SIAL + + ++AQ  + +  +   +   TTSTTTT A + T T PT  +     P  +  
Sbjct: 3461 SIALPENKVSEAQANSGSGASSTTTATSTTSTTTTTAASTTPTPPTAPTPVTSAPALVAA 3520

Query: 1073 TNIDTLLVATDQT 1085
            T I T++VA   T
Sbjct: 3521 TAISTIVVAASTT 3533


>gi|18079216 CASK interacting protein 1 [Homo sapiens]
          Length = 1431

 Score = 38.5 bits (88), Expect = 0.051
 Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 15/113 (13%)

Query: 681  MNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSLSIGGSAAPHTQSMQ------ 734
            + +A   PP V PK  PP  +      P  +  +AG+ S S G S AP            
Sbjct: 1260 VKRAHGTPPPVSPKPPPPPTA------PKPVKAVAGLPSGSAGPSPAPSPARQPPAALAK 1313

Query: 735  --GFPPNLGSAFSTPQSP-AKAFPPLSTPNQTTAFSGIGGLSSQLPVGGLGTG 784
              G PP+LG++ + P SP A A    + P +  A +     +   P  G   G
Sbjct: 1314 PPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPG 1366


>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
          Length = 567

 Score = 38.1 bits (87), Expect = 0.067
 Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 3/94 (3%)

Query: 684 ARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSLSIGGSAAPHTQSMQGFPP---NL 740
           AR P  G  P    P+ +     SP Q  P     + +  G A+P   S  G PP   + 
Sbjct: 12  ARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASP 71

Query: 741 GSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSS 774
           G A     SPA+A P  ++P   +      G SS
Sbjct: 72  GRASPAQASPAQASPARASPALASLSRSSSGRSS 105


>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
          Length = 845

 Score = 37.4 bits (85), Expect = 0.11
 Identities = 44/189 (23%), Positives = 67/189 (35%), Gaps = 25/189 (13%)

Query: 646 ETLATMLACLQACAGSVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSA----- 700
           E + T     QA A     E   T+ +  A     +  + Q PP       P +      
Sbjct: 414 EVVLTTTTLAQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPPSTDVPPSPEAGGTTGP 473

Query: 701 -SSLDAISPVQIDPLAGMTSLSIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLST 759
            +S  +  P   +P  G ++ S GG   PH       PP+ G+    P S     PP + 
Sbjct: 474 WTSTTSEVPRPPEPSQGPSTTSSGGGTGPH-------PPS-GTTLRPPTSSTPGGPPGAE 525

Query: 760 PNQTTAFSGIGGLSSQLPVGGLGTGSLTGIGTGALGLPAVNNDPFVQR-----------K 808
            + +   +  GG ++Q P  G       G+GT     PA  +    Q             
Sbjct: 526 NSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPS 585

Query: 809 LGTSGLNQP 817
           +GTS  +QP
Sbjct: 586 MGTSTSHQP 594


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 37.0 bits (84), Expect = 0.15
 Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 29/212 (13%)

Query: 663  SQELSETILTMVANCSNVMNKA------RQPPPGVMPKGRPPSASSLDAISPVQIDPLAG 716
            S E +E + +  A C+  M  +       QPPP     G P  + SL   +P    P  G
Sbjct: 1210 STEFTEALRSPPAACAGEMGASPGLLIPEQPPPSRHDTGTPKPSGSLANTAPHGSSPTPG 1269

Query: 717  MTSL--SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSS 774
            + SL    GG+ AP + + +  P          + P +   P++ P+ +TA      LSS
Sbjct: 1270 VGSLLGGPGGTQAPVSHNSKDPP---------ARQPGEFLAPVANPS-STACPKPSVLSS 1319

Query: 775  QLPVGGLGTGSLTGIGTGALGLPAVN------NDPFVQRKLGTSGLNQPTFQQSKMKPSD 828
            ++   G       G     LG+P         + P  +  LG   L     ++   KPS 
Sbjct: 1320 KISSFGCDP---AGFNRDPLGVPVAKKGPQPYSSPHSELFLGPKDLAGCFLEELHPKPS- 1375

Query: 829  LSQVWPEANQHFSKEIDDEANSYFQRIYNHPP 860
             ++  P A+     +  ++A S   ++   PP
Sbjct: 1376 -ARDAPPASSSCLCQDGEDAGSLEPQLPRSPP 1406


>gi|18677735 proline-rich coiled-coil 1 [Homo sapiens]
          Length = 445

 Score = 36.6 bits (83), Expect = 0.19
 Identities = 45/178 (25%), Positives = 61/178 (34%), Gaps = 52/178 (29%)

Query: 688 PPGVMPKGRPPSASSLDAISPVQIDPLAGMTSLSIGGSAAPHTQSMQGFPPNLGSAFSTP 747
           PPG  P      A++  + +PV   PLA  +S S     +P+  SM+ FPP    A+STP
Sbjct: 11  PPGTPPPNPAGLAATAMSSTPV---PLAATSSFS-----SPNVSSMESFPP---LAYSTP 59

Query: 748 QSP------------------------AKAFPPLSTPNQTTAFSG--------------- 768
           Q P                          + PP  +P+   AF                 
Sbjct: 60  QPPLPPVRPSAPLPFVPPPAVPSVPPLVTSMPPPVSPSTAAAFGNPPVSHFPPSTSAPNT 119

Query: 769 -IGGLSSQLPVGGLGTGSLTGIGTGALG-LPAVNNDPFVQRKLGTSGLNQPTFQQSKM 824
            +    S  P+ G   GS   I  G  G  P     P      GT  L  P  QQ+ +
Sbjct: 120 LLPAPPSGPPISGFSVGSTYDITRGHAGRAPQTPLMPSFSAPSGTGLLPTPITQQASL 177


>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
          Length = 753

 Score = 36.2 bits (82), Expect = 0.25
 Identities = 39/145 (26%), Positives = 53/145 (36%), Gaps = 8/145 (5%)

Query: 682 NKARQPP--PGVMPKGRPPSASSLDAISPVQIDPLAGMTSLSIGGSAAPHTQSMQGFPPN 739
           N+  Q P  P   P G PP+AS+L         P       ++G  A+P      G P  
Sbjct: 311 NQHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALGPKASPAPSHNSGTPAP 370

Query: 740 LGSAFSTP----QSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGGLGTGSLTGIGTGALG 795
              A + P     S  +  PP   P+        GG SS       G G+  G   GA  
Sbjct: 371 YAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGGA--GKQNGATS 428

Query: 796 LPAVNNDPFVQRKLGTSGLNQPTFQ 820
             +V  D   +  L +SG N  + Q
Sbjct: 429 YSSVVADSPAEVALSSSGGNNASSQ 453


>gi|126352608 elastin isoform e precursor [Homo sapiens]
          Length = 705

 Score = 35.8 bits (81), Expect = 0.33
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 713 PLAGMTSLSIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGL 772
           P AG+  + + G+  P      G P        +P++ AKA    +         G+GG+
Sbjct: 337 PGAGVPGVGVPGAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV-GVGGI 394

Query: 773 SSQLPVGGLGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGL 814
               P  G+G G   G G G  G+P V   P V    G  G+
Sbjct: 395 ----PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGV 432


>gi|126352446 elastin isoform d precursor [Homo sapiens]
          Length = 711

 Score = 35.8 bits (81), Expect = 0.33
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 713 PLAGMTSLSIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGL 772
           P AG+  + + G+  P      G P        +P++ AKA    +         G+GG+
Sbjct: 342 PGAGVPGVGVPGAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV-GVGGI 399

Query: 773 SSQLPVGGLGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGL 814
               P  G+G G   G G G  G+P V   P V    G  G+
Sbjct: 400 ----PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGV 437


>gi|126352322 elastin isoform c precursor [Homo sapiens]
          Length = 692

 Score = 35.8 bits (81), Expect = 0.33
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 713 PLAGMTSLSIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGL 772
           P AG+  + + G+  P      G P        +P++ AKA    +         G+GG+
Sbjct: 342 PGAGVPGVGVPGAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV-GVGGI 399

Query: 773 SSQLPVGGLGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGL 814
               P  G+G G   G G G  G+P V   P V    G  G+
Sbjct: 400 ----PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGV 437


>gi|126352700 elastin isoform b precursor [Homo sapiens]
          Length = 677

 Score = 35.8 bits (81), Expect = 0.33
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 713 PLAGMTSLSIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGL 772
           P AG+  + + G+  P      G P        +P++ AKA    +         G+GG+
Sbjct: 327 PGAGVPGVGVPGAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV-GVGGI 384

Query: 773 SSQLPVGGLGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGL 814
               P  G+G G   G G G  G+P V   P V    G  G+
Sbjct: 385 ----PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGV 422


>gi|126352440 elastin isoform a precursor [Homo sapiens]
          Length = 724

 Score = 35.8 bits (81), Expect = 0.33
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 713 PLAGMTSLSIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGL 772
           P AG+  + + G+  P      G P        +P++ AKA    +         G+GG+
Sbjct: 337 PGAGVPGVGVPGAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV-GVGGI 394

Query: 773 SSQLPVGGLGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGL 814
               P  G+G G   G G G  G+P V   P V    G  G+
Sbjct: 395 ----PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGV 432


>gi|38570081 CUG triplet repeat, RNA-binding protein 1 isoform 2
           [Homo sapiens]
          Length = 483

 Score = 35.8 bits (81), Expect = 0.33
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 3/110 (2%)

Query: 695 GRPPSASSLDAISPVQIDPLAGMTSLSIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAF 754
           G   + SSL  +  +    L  + +L+   SAA +T S         S  S   S A + 
Sbjct: 238 GNLNTLSSLHPMGGLNAMQLQNLAALAAAASAAQNTPSGTNALTTSSSPLSVLTSSAGSS 297

Query: 755 PPLSTPNQTTAFSGIGGLSSQL-PVGGLGTGSLTGIG--TGALGLPAVNN 801
           P  S+ N     + +G L +      GL  GSL G+    G LG   ++N
Sbjct: 298 PSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAALNGGLGSSGLSN 347


>gi|11415052 retinoid X receptor, beta [Homo sapiens]
          Length = 533

 Score = 35.4 bits (80), Expect = 0.43
 Identities = 38/124 (30%), Positives = 48/124 (38%), Gaps = 38/124 (30%)

Query: 689 PGVMPKGRPPSASSLDAISPVQIDPLAGMTSLSIGGSAAPHTQSMQGFPPNLGSAF---- 744
           P  +P+G PP +       P    PL   T+ S+GGS AP    M   PP LGS F    
Sbjct: 88  PNPLPQGVPPPSPP----GP----PLPPSTAPSLGGSGAPPPPPMP--PPPLGSPFPVIS 137

Query: 745 ---STPQSPAKAFP----PLSTPNQTTAFS-----------------GIGGLSSQLPVGG 780
               +P  P  A P    P+S+P   +  S                 G+ GL    P GG
Sbjct: 138 SSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPGG 197

Query: 781 LGTG 784
            G G
Sbjct: 198 PGAG 201


>gi|39725717 coiled-coil domain containing 141 [Homo sapiens]
          Length = 875

 Score = 35.4 bits (80), Expect = 0.43
 Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 16/153 (10%)

Query: 1037 STMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLVATDQTERI--VEPPEN 1094
            +T+V     +T  KT    +     F K + PS+     + +  ATD  + +  +E  + 
Sbjct: 455  ATVVRVGKYSTECKTKEAVKILHQQFNKFIAPSVPQQE-ERIQEATDLAQHLYGLEEGQK 513

Query: 1095 IQEKIAFIFNNLSQS--NMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNF 1152
              EKI      + +S   + + + EL+E +K+  +           + + PN    + ++
Sbjct: 514  YIEKIVTKHKEVLESVTELCESLTELEEKLKQGDV-----------LKMNPNLEDFHYDY 562

Query: 1153 LDTLKNPEFNKMVLNETYRNIKVLLTSDKAAAN 1185
            +D LK P  NK  +    RN   +  +D    N
Sbjct: 563  IDLLKEPAKNKQTIFNEERNKGQVQVADLLGIN 595


>gi|169167859 PREDICTED: hypothetical protein, partial [Homo sapiens]
          Length = 214

 Score = 35.0 bits (79), Expect = 0.56
 Identities = 20/76 (26%), Positives = 32/76 (42%)

Query: 1013 GSIALAQAQAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINT 1072
            GS +++Q + Q   P        ++ ++ T+TTTT   T   T  T  +       +I T
Sbjct: 28   GSNSISQRRNQIYAPLPNTAGSSIALLLPTTTTTTTTTTTITTTTTTTTTITTTTTTITT 87

Query: 1073 TNIDTLLVATDQTERI 1088
            T   T+   T  T  I
Sbjct: 88   TTTTTITTTTTTTTTI 103



 Score = 32.0 bits (71), Expect = 4.8
 Identities = 17/49 (34%), Positives = 23/49 (46%)

Query: 1037 STMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLVATDQT 1085
            +T+ TT+TT T   T T+T  T  +       +I TT I T    T  T
Sbjct: 76   TTITTTTTTITTTTTTTITTTTTTTTTITTTTTITTTTITTTTTTTTTT 124



 Score = 31.6 bits (70), Expect = 6.2
 Identities = 17/52 (32%), Positives = 24/52 (46%)

Query: 1037 STMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLVATDQTERI 1088
            +T+ TT+TTTT   T T    T ++       +  TT I T +  T  T  I
Sbjct: 91   TTITTTTTTTTTITTTTTITTTTITTTTTTTTTTTTTTITTTITTTITTTTI 142



 Score = 31.2 bits (69), Expect = 8.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 1037 STMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLL 1079
            +T +TTST TT   + T+T  T ++    +  +  TT I T +
Sbjct: 171  TTTITTSTITTTTTSTTITTTTTITTTTTITTTTTTTTITTTI 213


>gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]
          Length = 1586

 Score = 34.7 bits (78), Expect = 0.74
 Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 5/155 (3%)

Query: 629 GGLAPEKDQPKSAQLPPETLATMLACLQACAGSVSQELSE--TILTMVANCSNVMNKARQ 686
           GG A     P+ ++L    + TML+ LQ    S +  +S   T+    +  S   +  R 
Sbjct: 777 GGPAGLLPNPRLSELSASEV-TMLSQLQERRDSSTSTVSSAYTVSRRSSGISPYFSSRRS 835

Query: 687 PPPGVMPKGRPPSASSLDAISPVQIDP--LAGMTSLSIGGSAAPHTQSMQGFPPNLGSAF 744
                +  GRP +ASS D+  P+  D    +   S   GGS   +    Q +      A 
Sbjct: 836 SEASPLGAGRPHNASSADSYDPISTDASRRSSEASQCSGGSGLLNLTPAQQYSLRAKYAA 895

Query: 745 STPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVG 779
           +T   P    P L   +  T  + +      LP G
Sbjct: 896 ATGGPPPTPLPGLERMSLRTRLALLDAPERTLPAG 930


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 34.7 bits (78), Expect = 0.74
 Identities = 47/153 (30%), Positives = 66/153 (43%), Gaps = 36/153 (23%)

Query: 640 SAQLPPETLATMLACLQACA--GSVSQELSETILTM-----VANCSNVMNKARQPP---- 688
           S Q PP  LA  L+ LQA    GS + + + + LTM      A+ ++    A  PP    
Sbjct: 399 SLQAPPSPLA--LSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPP 456

Query: 689 ---PGVMPKGRPPSASSLDAISPVQ----IDPLAGMTSLSIGGSAAP---------HTQS 732
              P  +P   P   S   A+SP+     I PL  ++SL+     AP          TQS
Sbjct: 457 LQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQS 516

Query: 733 MQGFPPNL---GSAFSTP---QSPAKAFPPLST 759
               PP+L    ++ +TP     P+ A PPL T
Sbjct: 517 SLA-PPSLQTPPASLTTPPLENLPSLAPPPLQT 548



 Score = 31.6 bits (70), Expect = 6.2
 Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 11/100 (11%)

Query: 686 QPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSLSIGGS--AAPHTQSMQGFPPNLGSA 743
           Q PP   P   PP + S  A  P ++ PL     L +  S  A+     +   PP    A
Sbjct: 736 QVPPS--PPASPPMSPS--ATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPA 791

Query: 744 FSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGGLGT 783
            +TP   A   PP S P Q   FS     S+ LP+  L T
Sbjct: 792 LATPPLQALPSPPASFPGQ-APFSP----SASLPMSPLAT 826


>gi|113417084 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 194

 Score = 34.7 bits (78), Expect = 0.74
 Identities = 18/51 (35%), Positives = 25/51 (49%)

Query: 1038 TMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLVATDQTERI 1088
            T +TT+TTTT+  T T T  T ++       +  TT I T  + T  T  I
Sbjct: 123  TTITTTTTTTITTTTTTTTITTITTTTTTTITTTTTTITTTTITTTTTTTI 173



 Score = 31.6 bits (70), Expect = 6.2
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)

Query: 1037 STMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLVATDQT 1085
            +T +TT+TTTT   T+T T  T ++       +I TT I T    T  T
Sbjct: 130  TTTITTTTTTTTITTITTTTTTTIT---TTTTTITTTTITTTTTTTITT 175


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 34.3 bits (77), Expect = 0.96
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 12/126 (9%)

Query: 644 PPETLATMLACLQACAGSVSQELSETILTMVANCSNVMNKARQPPPGVMP----KGRPPS 699
           PP+  + +    QA A S   +++  ++  +A  S  +   R+PPPG  P     G PP 
Sbjct: 720 PPQVTSAIATLQQAAAMSFCPQVARPLVGPLALGSPRL--VRRPPPGPAPAAASPGPPPP 777

Query: 700 ASSLDA-ISP--VQIDPLAGMTSLSIGGSAAPHTQSMQGFPPNLGSAFSTPQ---SPAKA 753
           AS   A  SP   +  P  G+ +  + G A P  +  +   P   S  S P     PA +
Sbjct: 778 ASPPGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRASRPLSASQPSLPHGAPGPAAS 837

Query: 754 FPPLST 759
             P S+
Sbjct: 838 TRPASS 843



 Score = 31.6 bits (70), Expect = 6.2
 Identities = 39/133 (29%), Positives = 48/133 (36%), Gaps = 12/133 (9%)

Query: 684 ARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTS--LSIGGSAAPHTQSMQGFPPNLG 741
           A  P PG  P   PP A +L   +  +  P   + S   S G    P   S     PN  
Sbjct: 42  APPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDSSCGRPGTPGAASTAKGSPNGE 101

Query: 742 SAFSTPQ-SPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGGLGTGSLTGIGT---GALGLP 797
                PQ SPA    P   P    +FS  G  S   P    G G     G+   G  G P
Sbjct: 102 CGRGEPQCSPAGPEGPARGPK--VSFSCRGAASGPAP----GPGPAEEAGSEEAGPAGEP 155

Query: 798 AVNNDPFVQRKLG 810
             +   F+QR+ G
Sbjct: 156 RGSQASFMQRQFG 168


>gi|157168329 formin 1 [Homo sapiens]
          Length = 1196

 Score = 34.3 bits (77), Expect = 0.96
 Identities = 43/161 (26%), Positives = 59/161 (36%), Gaps = 25/161 (15%)

Query: 634 EKDQPKSAQLPPETLATMLACLQACAGSVSQELSETILTMVANCSNVMNKARQPPPGVMP 693
           E    +S QL P+ L  + +  Q    +  +++   +  M    SN   KA  PPP  +P
Sbjct: 596 ESKTTRSNQLVPKKL-NISSLSQLSPPNDHKDIHAALQPMEGMASN-QQKALPPPPASIP 653

Query: 694 KGRPPSASSLDAISPVQIDPLAGMTSLSIGGSAAPHTQSMQGFPPNLGS----------- 742
              PP  S L ++SP        M  +S G    P        PP   +           
Sbjct: 654 PP-PPLPSGLGSLSPAP-----PMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPL 707

Query: 743 ----AFSTPQSPAKAFPP--LSTPNQTTAFSGIGGLSSQLP 777
               A   P  P  A PP  L+ P     F G+G  SSQ P
Sbjct: 708 PNSPAPPNPGGPPPAPPPPGLAPPPPPGLFFGLGSSSSQCP 748


>gi|237858675 neurofascin isoform 1 precursor [Homo sapiens]
          Length = 1240

 Score = 34.3 bits (77), Expect = 0.96
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 1001 PP--VKMQGSITTPGSIALA---QAQAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVT 1055
            PP  V   G++++  + A+A   +A     +P  AP     +T V T+TTTT A T T  
Sbjct: 933  PPTTVGATGAVSSTDATAIAATTEATTVPIIPTVAPTTIATTTTVATTTTTTAAATTTTE 992

Query: 1056 RP----TGVSFKKDVPPSINTTNIDTL 1078
             P    +G    +  P   +  N+  L
Sbjct: 993  SPPTTTSGTKIHESAPDEQSIWNVTVL 1019


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 34.3 bits (77), Expect = 0.96
 Identities = 17/49 (34%), Positives = 23/49 (46%)

Query: 1307 DRLKNLDEQLSAPKKDVKQPEELPPITTTTTSTTPATNTTCTATVPPQP 1355
            ++LK LDE+  AP K +K     PP   +T +  PA      A   P P
Sbjct: 488  EKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP 536


>gi|87162461 fragile X mental retardation 2 [Homo sapiens]
          Length = 1311

 Score = 34.3 bits (77), Expect = 0.96
 Identities = 19/61 (31%), Positives = 27/61 (44%)

Query: 1000 DPPVKMQGSITTPGSIALAQAQAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTG 1059
            D P K   +  T  + A+A A   A       +    +   TT+TTTT   T+T T  TG
Sbjct: 974  DTPKKASSATITVTNTAIATATVTATAIVTTTVTATATATATTTTTTTTISTITSTITTG 1033

Query: 1060 V 1060
            +
Sbjct: 1034 L 1034


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 34.3 bits (77), Expect = 0.96
 Identities = 40/145 (27%), Positives = 48/145 (33%), Gaps = 16/145 (11%)

Query: 686 QPPPGVMPKGR----PPSASSLDAISPVQIDPLAGMTSLSIGGSAAPH-TQSMQGFPPNL 740
           QPPP   P  +    PP   S   +      P  G+ S     S+AP  T    G PP  
Sbjct: 86  QPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS 145

Query: 741 GSAFSTPQSPAKAFPPLSTPNQTTAFSGI--------GGLSSQLPVGGLGTGSLTGIGTG 792
           G   +    PA    P   P  T   SG+        G       V G G G   G G G
Sbjct: 146 GPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPG 205

Query: 793 ALGLPAVNNDPFVQRKLGTSGLNQP 817
               P     P   +  G  GL+ P
Sbjct: 206 G---PKGGKMPGGPKPGGGPGLSTP 227


>gi|59710093 G-protein coupled receptor 112 [Homo sapiens]
          Length = 3080

 Score = 34.3 bits (77), Expect = 0.96
 Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 21/147 (14%)

Query: 631  LAPEKDQPKSAQLPPETLATMLACLQACAGSVSQELSETILTMVANCSNVMNKARQPPPG 690
            ++P     KSA  P + + T   C  +    ++  L +T LT   N +  +N     PP 
Sbjct: 1767 VSPSLTSFKSASGPTKNVKTTTNCFSSNTRKMTSLLEKTSLT---NYATSLNTPVSYPPW 1823

Query: 691  VMPKGRPPSASSLDAISPVQIDPLAGMTSLSIGGSAAPHTQSMQGFP------------P 738
                   PS+++L +++     P +    +S   ++ P T  M  FP            P
Sbjct: 1824 T------PSSATLPSLTSFVYSPHSTEAEISTPKTSPPPTSQMVEFPVLGTRMTSSNTQP 1877

Query: 739  NLGSAFSTPQSPAKAFPPLSTPNQTTA 765
             L ++++ P +    FP  +T N  T+
Sbjct: 1878 LLMTSWNIPTAEGSQFPISTTINVPTS 1904


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,582,156
Number of Sequences: 37866
Number of extensions: 2676115
Number of successful extensions: 12488
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 10167
Number of HSP's gapped (non-prelim): 2446
length of query: 1551
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1435
effective length of database: 13,855,062
effective search space: 19882013970
effective search space used: 19882013970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.