Guide to the Human Genome
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Name: DDA1 Sequence: fasta or formatted (102aa) NCBI GI: 13129016
Description:

DET1 and DDB1 associated 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9          7           2
 C cysteine            1.0          1           1
 D aspartate           6.9          7           1
 E glutamate           7.8          8           1
 F phenylalanine       2.9          3           1
 G glycine             2.0          2           1
 H histidine           2.9          3           1
 I isoleucine          2.9          3           2
 K lysine              8.8          9           2
 L leucine             6.9          7           2
 M methionine          2.0          2           1
 N asparagine          4.9          5           1
 P proline             6.9          7           2
 Q glutamine           4.9          5           2
 R arginine            7.8          8           2
 S serine              8.8          9           2
 T threonine           4.9          5           1
 V valine              5.9          6           1
 W tryptophan          1.0          1           1
 Y tyrosine            3.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DET1 and DDB1 associated 1 
STIL                  0.043   SCL/TAL1 interrupting locus isoform 1 
STIL                  0.043   SCL/TAL1 interrupting locus isoform 2 
SCN8A                 0.022   sodium channel, voltage gated, type VIII, alpha [Homo...
NARG1L                0.022   NMDA receptor regulated 1-like protein isoform 1 [Ho...
SCAMP1                0.016   secretory carrier membrane protein 1 
UBXN7                 0.016   UBX domain containing 7 
LOC727838             0.016   PREDICTED: similar to cancer/testis antigen family ...
LOC727838             0.016   PREDICTED: similar to cancer/testis antigen family ...
LOC100129571          0.011   PREDICTED: similar to hCG1646049 
LOC100129571          0.011   PREDICTED: similar to hCG1646049 
LOC100129571          0.011   PREDICTED: similar to hCG1646049 
EIF3M                 0.011   eukaryotic translation initiation factor 3, subunit ...
CHD1                  0.011   chromodomain helicase DNA binding protein 1 
TCHH                  0.011   trichohyalin 
ADAMTSL3              0.011   ADAMTS-like 3 precursor 
INVS                  0.011   inversin isoform a 
INVS                  0.011   inversin isoform b 
ITGAE                 0.005   integrin, alpha E precursor 
LOC727838             0.005   PREDICTED: similar to cancer/testis antigen family ...
FAM186B               0.005   hypothetical protein LOC84070 
NXF3                  0.005   nuclear RNA export factor 3 
TTN                   0.005   titin isoform novex-3 
TTN                   0.005   titin isoform N2-A 
TTN                   0.005   titin isoform novex-2 
TTN                   0.005   titin isoform novex-1 
TTN                   0.005   titin isoform N2-B 
SYNE1                 0.005   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.005   spectrin repeat containing, nuclear envelope 1 isof...
GLT25D1               0.005   glycosyltransferase 25 domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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