SCAMP1 1734

Name: SCAMP1	Sequence: fasta or formatted (338aa)		NCBI GI: 116256358
Description: secretory carrier membrane protein 1		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 34 3 C cysteine 2.1 7 1 D aspartate 3.8 13 1 E glutamate 4.1 14 2 F phenylalanine 8.9 30 3 G glycine 5.0 17 2 H histidine 2.1 7 1 I isoleucine 4.1 14 3 K lysine 4.1 14 2 L leucine 7.4 25 2 M methionine 3.0 10 2 N asparagine 5.9 20 2 P proline 7.1 24 3 Q glutamine 5.0 17 2 R arginine 3.8 13 2 S serine 6.8 23 2 T threonine 5.0 17 2 V valine 6.8 23 1 W tryptophan 2.1 7 1 Y tyrosine 2.7 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 secretory carrier membrane protein 1 SCAMP2 0.512 secretory carrier membrane protein 2 SCAMP3 0.487 secretory carrier membrane protein 3 isoform 1 [Homo... SCAMP3 0.463 secretory carrier membrane protein 3 isoform 2 [Homo... SCAMP5 0.305 secretory carrier membrane protein 5 SCAMP4 0.280 secretory carrier membrane protein 4 HDAC9 0.015 histone deacetylase 9 isoform 5 EHBP1 0.015 EH domain binding protein 1 isoform 3 EHBP1 0.015 EH domain binding protein 1 isoform 3 EHBP1 0.015 EH domain binding protein 1 isoform 2 EHBP1 0.015 EH domain binding protein 1 isoform 1 UBE2L3 0.015 ubiquitin-conjugating enzyme E2L 3 isoform 1 SLC10A6 0.013 sodium-dependent organic anion transporter AZI1 0.013 5-azacytidine induced 1 isoform a PALM 0.013 paralemmin isoform 2 PALM 0.013 paralemmin isoform 1 SPTY2D1 0.012 SPT2, Suppressor of Ty, domain containing 1 KL 0.012 klotho MAML2 0.010 mastermind-like 2 ATN1 0.010 atrophin-1 ATN1 0.010 atrophin-1 CDC42BPG 0.010 CDC42 binding protein kinase gamma (DMPK-like) [Hom... ATXN2 0.010 ataxin 2 TMEM8B 0.010 transmembrane protein 8B isoform a TMEM8B 0.010 transmembrane protein 8B isoform a CC2D1B 0.009 coiled-coil and C2 domain containing 1B SF3A2 0.009 splicing factor 3a, subunit 2 TMEM8B 0.009 transmembrane protein 8B isoform b AMOTL1 0.009 angiomotin like 1 ESPN 0.009 espin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.