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Search of human proteins with 4557757
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4557757 MutL protein homolog 1 [Homo sapiens]
(756 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4557757 MutL protein homolog 1 [Homo sapiens] 1494 0.0
gi|4505913 PMS2 postmeiotic segregation increased 2 isoform a [H... 167 4e-41
gi|189458898 postmeiotic segregation 1 isoform c [Homo sapiens] 131 3e-30
gi|4505911 postmeiotic segregation 1 isoform a [Homo sapiens] 131 3e-30
gi|189458896 postmeiotic segregation 1 isoform b [Homo sapiens] 121 2e-27
gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens] 110 4e-24
gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens] 110 4e-24
gi|239743246 PREDICTED: hypothetical protein XP_002342778 [Homo ... 98 3e-20
gi|169170512 PREDICTED: similar to Postmeiotic segregation incre... 98 3e-20
gi|19923559 EMSY protein [Homo sapiens] 37 0.089
gi|50843827 activating molecule in beclin-1-regulated autophagy ... 36 0.15
gi|7019405 host cell factor C2 [Homo sapiens] 36 0.15
gi|5454016 retinitis pigmentosa RP1 protein [Homo sapiens] 35 0.34
gi|13376367 WD repeat domain 76 [Homo sapiens] 35 0.34
gi|22538422 activating transcription factor 2 [Homo sapiens] 34 0.57
gi|82830424 gon-4-like isoform a [Homo sapiens] 33 0.75
gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens] 33 0.75
gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens] 33 0.75
gi|83415174 hypothetical protein LOC400818 [Homo sapiens] 33 0.75
gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo ... 33 0.98
gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo ... 33 0.98
gi|11067749 bromodomain containing protein 3 [Homo sapiens] 33 0.98
gi|82830428 gon-4-like isoform b [Homo sapiens] 33 1.3
gi|41352705 kinesin family member 3C [Homo sapiens] 33 1.3
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 33 1.3
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 32 1.7
gi|114158664 hypothetical protein LOC343505 [Homo sapiens] 32 1.7
gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... 32 2.2
gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo... 32 2.2
gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo ... 32 2.2
>gi|4557757 MutL protein homolog 1 [Homo sapiens]
Length = 756
Score = 1494 bits (3869), Expect = 0.0
Identities = 756/756 (100%), Positives = 756/756 (100%)
Query: 1 MSFVAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQ 60
MSFVAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQ
Sbjct: 1 MSFVAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQ 60
Query: 61 IQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTA 120
IQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTA
Sbjct: 61 IQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTA 120
Query: 121 DGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVV 180
DGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVV
Sbjct: 121 DGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVV 180
Query: 181 GRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAF 240
GRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAF
Sbjct: 181 GRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAF 240
Query: 241 KMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISP 300
KMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISP
Sbjct: 241 KMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISP 300
Query: 301 QNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEMV 360
QNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEMV
Sbjct: 301 QNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEMV 360
Query: 361 KSTTSLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQAIVTEDKTDIS 420
KSTTSLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQAIVTEDKTDIS
Sbjct: 361 KSTTSLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQAIVTEDKTDIS 420
Query: 421 SGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHREDSDVE 480
SGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHREDSDVE
Sbjct: 421 SGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHREDSDVE 480
Query: 481 MVEDDSRKEMTAACTPRRRIINLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWAL 540
MVEDDSRKEMTAACTPRRRIINLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWAL
Sbjct: 481 MVEDDSRKEMTAACTPRRRIINLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWAL 540
Query: 541 AQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGWTEE 600
AQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGWTEE
Sbjct: 541 AQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGWTEE 600
Query: 601 DGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRL 660
DGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRL
Sbjct: 601 DGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRL 660
Query: 661 ATEVNWDEEKECFESLSKECAMFYSIRKQYISEESTLSGQQSEVPGSIPNSWKWTVEHIV 720
ATEVNWDEEKECFESLSKECAMFYSIRKQYISEESTLSGQQSEVPGSIPNSWKWTVEHIV
Sbjct: 661 ATEVNWDEEKECFESLSKECAMFYSIRKQYISEESTLSGQQSEVPGSIPNSWKWTVEHIV 720
Query: 721 YKALRSHILPPKHFTEDGNILQLANLPDLYKVFERC 756
YKALRSHILPPKHFTEDGNILQLANLPDLYKVFERC
Sbjct: 721 YKALRSHILPPKHFTEDGNILQLANLPDLYKVFERC 756
>gi|4505913 PMS2 postmeiotic segregation increased 2 isoform a [Homo
sapiens]
Length = 862
Score = 167 bits (422), Expect = 4e-41
Identities = 119/384 (30%), Positives = 205/384 (53%), Gaps = 36/384 (9%)
Query: 5 AGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDN 64
A I+ +D V++I +G+V+ + A+KE++EN LDA +T+I + +K+ G+ LI++ DN
Sbjct: 12 AKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDN 71
Query: 65 GTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKC 124
G G+ +E+ + + + TSK+Q F DL + T+GFRGEAL+S+ ++ VTI+T A K
Sbjct: 72 GCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKV 131
Query: 125 AYRASYS-DGKL--KAP-PKPCAGNQGTQITVEDLFYNIATRRKAL-KNPSEEYGKILEV 179
R + +GK+ K P P+P +GT ++V+ LF + R K +N +EY K+++V
Sbjct: 132 GTRLMFDHNGKIIQKTPYPRP----RGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQV 187
Query: 180 VGRYSVHNAGISFSVKK---QGETVADVRTLPNASTVDNIRSIFGNAVSRELI------- 229
+ Y + +AGI S QG+ V T + S +NI S+FG + LI
Sbjct: 188 LHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPP 247
Query: 230 -EIGCEDKTLA--------FKMNGYISNANYSVKKCIF---LLFINHRLVESTSLRKAIE 277
+ CE+ L+ F ++G+IS + V + FIN R + + + +
Sbjct: 248 SDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVN 307
Query: 278 TVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGS 337
VY Y ++ +PF+ L++ + + VD+NV P K ++ L EE +L V +++ L+G
Sbjct: 308 EVYHMY-NRHQYPFVVLNISVDSECVDINVTPDKRQI-LLQEEKLLLAV---LKTSLIGM 362
Query: 338 NSSRMYFTQTLLPGLAGPSGEMVK 361
S + L G ++K
Sbjct: 363 FDSDVNKLNVSQQPLLDVEGNLIK 386
>gi|189458898 postmeiotic segregation 1 isoform c [Homo sapiens]
Length = 770
Score = 131 bits (329), Expect = 3e-30
Identities = 92/332 (27%), Positives = 162/332 (48%), Gaps = 22/332 (6%)
Query: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
+++L V +++ ++I + +KE+IEN LDA +TS+ V ++ G I+++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
I+ D ++ ++ TSK+ S EDL +++TYGFRGEAL SI +A V ITT+TA + +
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
Query: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRK---ALKNPSEEYGKILEVVGRYS 184
KP QGT +T LF N+ R++ K +E KI +++ +
Sbjct: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG 180
Query: 185 ----------VHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCE 234
VHN + + + + + ++ + ++N+ S ++ ++ G
Sbjct: 181 ILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL 240
Query: 235 DKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNT---HPF 291
K A +S S +FIN R V + K I Y K + +P
Sbjct: 241 PKCDADHSFTSLSTPERS------FIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPV 294
Query: 292 LYLSLEISPQNVDVNVHPTKHEVHFLHEESIL 323
+L +++ +VDVN+ P K +V ++ES+L
Sbjct: 295 FFLKIDVPTADVDVNLTPDKSQVLLQNKESVL 326
>gi|4505911 postmeiotic segregation 1 isoform a [Homo sapiens]
Length = 932
Score = 131 bits (329), Expect = 3e-30
Identities = 92/332 (27%), Positives = 162/332 (48%), Gaps = 22/332 (6%)
Query: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
+++L V +++ ++I + +KE+IEN LDA +TS+ V ++ G I+++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
I+ D ++ ++ TSK+ S EDL +++TYGFRGEAL SI +A V ITT+TA + +
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
Query: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRK---ALKNPSEEYGKILEVVGRYS 184
KP QGT +T LF N+ R++ K +E KI +++ +
Sbjct: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG 180
Query: 185 ----------VHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCE 234
VHN + + + + + ++ + ++N+ S ++ ++ G
Sbjct: 181 ILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL 240
Query: 235 DKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNT---HPF 291
K A +S S +FIN R V + K I Y K + +P
Sbjct: 241 PKCDADHSFTSLSTPERS------FIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPV 294
Query: 292 LYLSLEISPQNVDVNVHPTKHEVHFLHEESIL 323
+L +++ +VDVN+ P K +V ++ES+L
Sbjct: 295 FFLKIDVPTADVDVNLTPDKSQVLLQNKESVL 326
>gi|189458896 postmeiotic segregation 1 isoform b [Homo sapiens]
Length = 893
Score = 121 bits (304), Expect = 2e-27
Identities = 93/322 (28%), Positives = 154/322 (47%), Gaps = 41/322 (12%)
Query: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
+++L V +++ ++I + +KE+IEN LDA +TS+ V ++ G I+++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
I+ D ++ ++ TSK+ S EDL +++TYGFRGEAL SI +A V ITT+TA + +
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
Query: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRK---ALKNPSEEYGKILEVVGRYS 184
KP QGT +T LF N+ R++ K +E KI +++
Sbjct: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLL---- 176
Query: 185 VHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNG 244
+SF + K ++R +F V ++ G K A
Sbjct: 177 -----MSFGILK-----------------PDLRIVF---VHNKIYLSGFLPKCDADHSFT 211
Query: 245 YISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNT---HPFLYLSLEISPQ 301
+S S +FIN R V + K I Y K + +P +L +++
Sbjct: 212 SLSTPERS------FIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTA 265
Query: 302 NVDVNVHPTKHEVHFLHEESIL 323
+VDVN+ P K +V ++ES+L
Sbjct: 266 DVDVNLTPDKSQVLLQNKESVL 287
>gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens]
Length = 1453
Score = 110 bits (276), Expect = 4e-24
Identities = 105/351 (29%), Positives = 174/351 (49%), Gaps = 32/351 (9%)
Query: 7 VIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGT 66
+I+ L V ++ +G I ++E+ N +DA++ + V V + +Q+ DNG
Sbjct: 1 MIKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGF 59
Query: 67 GIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAH-VTITTKTADGKCA 125
G+ +D++ V R+ TSK S +DL + YGFRGEALA+I+ +A V I++K
Sbjct: 60 GMGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKT 119
Query: 126 YRASYSDGK-LKA-PPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRY 183
+ + GK LKA + GT +TV +LFY + RRK + +P E+ K+ + +
Sbjct: 120 FVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM-DPRLEFEKVRQRIEAL 178
Query: 184 SVHNAGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKM 242
S+ + ISFS++ + + V LP V I+G S++L EI + K F++
Sbjct: 179 SLMHPSISFSLRND-VSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYK--EFEL 235
Query: 243 NGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVY----AAYLPKN----------- 287
+GYIS+ + K F LF+N RLV T L K I+ + PKN
Sbjct: 236 SGYISSEAHYNKNMQF-LFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 288 ---THPFLYLSLEISPQ----NVDVNVHPTKHEVHFLHEESILERVQQHIE 331
+ P LY I+ Q DV + P K + F + +++L +Q+ ++
Sbjct: 295 RHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
>gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens]
Length = 1429
Score = 110 bits (276), Expect = 4e-24
Identities = 105/351 (29%), Positives = 174/351 (49%), Gaps = 32/351 (9%)
Query: 7 VIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGT 66
+I+ L V ++ +G I ++E+ N +DA++ + V V + +Q+ DNG
Sbjct: 1 MIKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGF 59
Query: 67 GIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAH-VTITTKTADGKCA 125
G+ +D++ V R+ TSK S +DL + YGFRGEALA+I+ +A V I++K
Sbjct: 60 GMGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKT 119
Query: 126 YRASYSDGK-LKA-PPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRY 183
+ + GK LKA + GT +TV +LFY + RRK + +P E+ K+ + +
Sbjct: 120 FVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM-DPRLEFEKVRQRIEAL 178
Query: 184 SVHNAGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKM 242
S+ + ISFS++ + + V LP V I+G S++L EI + K F++
Sbjct: 179 SLMHPSISFSLRND-VSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYK--EFEL 235
Query: 243 NGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVY----AAYLPKN----------- 287
+GYIS+ + K F LF+N RLV T L K I+ + PKN
Sbjct: 236 SGYISSEAHYNKNMQF-LFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 288 ---THPFLYLSLEISPQ----NVDVNVHPTKHEVHFLHEESILERVQQHIE 331
+ P LY I+ Q DV + P K + F + +++L +Q+ ++
Sbjct: 295 RHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
>gi|239743246 PREDICTED: hypothetical protein XP_002342778 [Homo
sapiens]
Length = 255
Score = 97.8 bits (242), Expect = 3e-20
Identities = 56/164 (34%), Positives = 99/164 (60%), Gaps = 8/164 (4%)
Query: 5 AGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDN 64
A I+ +D V++I +G V+ + A+K+++ N LDA +T+I + +K+ G+ LI++ N
Sbjct: 27 AKAIKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGN 86
Query: 65 GTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKC 124
G G+ +E+ + + + TSK++ F DL + T+GF+G+AL+S+ ++ VTI+T K
Sbjct: 87 GCGVEEENFEGLTLKHHTSKIREFADLTRVETFGFQGKALSSLCALSDVTISTCHVSAKV 146
Query: 125 AYRASYS-DGKL--KAP-PKPCAGNQGTQITVEDLFYNIATRRK 164
R + DGK+ K P P P +GT ++V+ LF + R K
Sbjct: 147 GTRLVFDHDGKIIQKTPYPHP----RGTTVSVKQLFSTLPVRHK 186
>gi|169170512 PREDICTED: similar to Postmeiotic segregation
increased 4-like protein [Homo sapiens]
Length = 255
Score = 97.8 bits (242), Expect = 3e-20
Identities = 56/164 (34%), Positives = 99/164 (60%), Gaps = 8/164 (4%)
Query: 5 AGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDN 64
A I+ +D V++I +G V+ + A+K+++ N LDA +T+I + +K+ G+ LI++ N
Sbjct: 27 AKAIKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGN 86
Query: 65 GTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKC 124
G G+ +E+ + + + TSK++ F DL + T+GF+G+AL+S+ ++ VTI+T K
Sbjct: 87 GCGVEEENFEGLTLKHHTSKIREFADLTRVETFGFQGKALSSLCALSDVTISTCHVSAKV 146
Query: 125 AYRASYS-DGKL--KAP-PKPCAGNQGTQITVEDLFYNIATRRK 164
R + DGK+ K P P P +GT ++V+ LF + R K
Sbjct: 147 GTRLVFDHDGKIIQKTPYPHP----RGTTVSVKQLFSTLPVRHK 186
>gi|19923559 EMSY protein [Homo sapiens]
Length = 1322
Score = 36.6 bits (83), Expect = 0.089
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 40/179 (22%)
Query: 581 PLFDLAMLALDSPESGWTEEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEEGNLIGLP 640
P DL+ +A+ P E+ E + +VE +E++A+Y + E +EG + P
Sbjct: 798 PTIDLSQMAV--PIQMTQEKRHSPESPSIAVVE-----SELVAEYITTERTDEGTEVAFP 850
Query: 641 LLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSIRKQYISEESTLSGQ 700
LL+ + P + S + + Q++++ T + Q
Sbjct: 851 LLVSHRSQPQQ----------------------PSQPQRTLL------QHVAQSQTAT-Q 881
Query: 701 QSEVPGSIPNSWKWTVEHIVYKALRSHILPPKHF----TEDGNILQLANLPDLYKVFER 755
S V SIP S + HI+ +AL SH KH TE+G + ++ L +F R
Sbjct: 882 TSVVVKSIPASSPGAITHIMQQALSSHTAFTKHSEELGTEEGEVEEMDTLDPQTGLFYR 940
>gi|50843827 activating molecule in beclin-1-regulated autophagy
[Homo sapiens]
Length = 1208
Score = 35.8 bits (81), Expect = 0.15
Identities = 44/177 (24%), Positives = 68/177 (38%), Gaps = 19/177 (10%)
Query: 348 LLPGLAGPSGEMVKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQ 407
LL + PS + + T S + Q S+ + L LSS+
Sbjct: 195 LLTAIVNPSNQQGDDEPEIPIDGTELS----HYRQRALLQSQPVRRTPLLHNFLHMLSSR 250
Query: 408 PQAIVTEDKTDISSGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMSEKR---GP 464
I TE + QQD+ +L P+ + S G+T + S +R GP
Sbjct: 251 SSGIQTEPFHPPEQASSTQQDQGLLN--RPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGP 308
Query: 465 TSSNPRKRHRE--------DSDVEMVEDDSRKEMTAACTPRRRI--INLTSVLSLQE 511
SS+P + HRE + ++ +SR E + PR ++L SVL QE
Sbjct: 309 LSSHPSRYHREIAPGLTGSEWTRTVLSLNSRSEAESMPPPRTSASSVSLLSVLRQQE 365
>gi|7019405 host cell factor C2 [Homo sapiens]
Length = 792
Score = 35.8 bits (81), Expect = 0.15
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 337 SNSSRMYFTQTLLPGLAGPSGEMVKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQKLDAF 396
S++ M QT+ + +G +VK TSLT+ ST D+ YA + T + A
Sbjct: 518 SSTQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSEVDETYA--LPATKISRVETHAT 575
Query: 397 LQPLSKPLSSQPQAIV 412
P SK S P A V
Sbjct: 576 ATPFSKETPSNPVATV 591
>gi|5454016 retinitis pigmentosa RP1 protein [Homo sapiens]
Length = 2156
Score = 34.7 bits (78), Expect = 0.34
Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 32/239 (13%)
Query: 336 GSNSSRMYFTQTLLPGLAG---PSGEMVKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQK 392
G+ + Y LPG++ P G + +++ +S S ++Y+ +T + +
Sbjct: 230 GNYDIQKYLLPARLPGISQRVYPKGNAKSESRKISTHMSSSSRSQIYSVSSEKTHNNDCY 289
Query: 393 LDAFLQP---LSKPLSSQPQAIVTEDKTDISSGRARQQDEEMLELPAPAEVAAKNQSLEG 449
LD P L+ + + + DI QD M E+ + + E
Sbjct: 290 LDYSFVPEKYLALEKNDSQNLPIYPSEDDIEKSIIFNQDGTM-----TVEMKVRFRIKEE 344
Query: 450 DTTKGTSEMSEKRGPTSSNPRKRHREDSDVEMVEDDSRKEMTAAC------TPRRRIINL 503
+T K T+ +S K GP++++ + E S E S AAC +P R N
Sbjct: 345 ETIKWTTTVS-KTGPSNNDEKS---EMSFPGRTESRSSGLKLAACSFSADVSPMERSSNQ 400
Query: 504 TSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQ 562
SL EEIN Q + + E C + W A T + + T ++ FY+
Sbjct: 401 EG--SLAEEINIQMTDQVAET--------CSSASWENATVDTDI-IQGTQDQAKHRFYR 448
>gi|13376367 WD repeat domain 76 [Homo sapiens]
Length = 626
Score = 34.7 bits (78), Expect = 0.34
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 22/220 (10%)
Query: 360 VKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQAIVTEDKTDI 419
+K+T+S S+ SS V+ ++ + K A LS + S ED T
Sbjct: 98 MKNTSSKAESTLQNSSSAVHTE----SNKLQPKRTADAMNLSVDVESSQDGDSDEDTTPA 153
Query: 420 S--SGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHREDS 477
SG + + + + + A+ A Q E + EM EKR P S +K RE+
Sbjct: 154 LDFSGLSPYERKRLKNISENADFFASLQLSE--SAARLREMIEKRQPPKSKRKKPKRENG 211
Query: 478 -----DVEMVE-DDSRKEMTAACTPRRRIINLTSV-----LSLQEEINEQGHEVLREMLH 526
+ +++ D S + AA TP + + T + L + E E +E + LH
Sbjct: 212 IGCRRSMRLLKVDPSGVSLPAAPTPPTLVADETPLLPPGPLEMTSENQEDNNERFKGFLH 271
Query: 527 ---NHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQI 563
S N + L+ ++ LN +SE+ Y++
Sbjct: 272 TWAGMSKPSSKNTEKGLSSIKSYKANLNGMVISEDTVYKV 311
>gi|22538422 activating transcription factor 2 [Homo sapiens]
Length = 505
Score = 33.9 bits (76), Expect = 0.57
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 349 LPGLAGPSGEM-------VKSTTSLTSSS---TSGSSDKVYAHQMVRTDSREQKLDAFLQ 398
+PG+ GPS ++ +LT T+G + K + +VRT S E + + Q
Sbjct: 258 VPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGSGLVRTQSEESRPQSLQQ 317
Query: 399 PLSKPLSSQPQAIVTEDKTDISSGRARQQDEE 430
P + + T +T +SGR R+ E
Sbjct: 318 PATSTTETPASPAHTTPQTQSTSGRRRRAANE 349
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 33.5 bits (75), Expect = 0.75
Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 18/151 (11%)
Query: 371 TSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQAIVTEDKTDISSGRARQQDEE 430
T S+++ + V + QK + QP P SSQ TD++ G ++
Sbjct: 1358 TGAPSEELSSAGEVTKQTVLQKEEERSQPTKTPSSSQEPPDEGTSGTDVNKGSSKNALSS 1417
Query: 431 M---LELPAPAEVAAKNQSLEGD---TTKGTSEMSEKRGPTSSNPRKRHREDSDVEMVED 484
M + L +P + S++G T G EK GP E+ D + +
Sbjct: 1418 MDPEVRLSSPPGKPEDSSSVDGQSVGTPVGPETGGEKNGP-------EEEEEEDFDDLTQ 1470
Query: 485 DSRKEMTAACTPRRRIINLTSVLSLQEEINE 515
D EM++A ++ SV LQE + +
Sbjct: 1471 DEEDEMSSASEE-----SVLSVPELQETMEK 1496
>gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens]
Length = 578
Score = 33.5 bits (75), Expect = 0.75
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 381 HQMVRTDSREQKLDAFLQPLSKPLSSQPQAIV-------TEDKTDISSGRARQQDEEML- 432
H M++ + + Q+L L + P A + D + +S G +++E +
Sbjct: 138 HSMLQEEKKLQELQRCLVERRRNSEPPPAAALPLGRELSASDDSSLSDGLLLEEEESQVP 197
Query: 433 ----ELPAPAEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHREDSDVEMVEDDSR- 487
E PAP Q+LEG G S +R P ++P K D E S
Sbjct: 198 KPPPESPAPPSRPLPPQTLEGLQPTGPEAGSPERAPVQNSPWKETSLDHPYEKPRKSSEP 257
Query: 488 --KEMTAACTPR 497
+ + A TP+
Sbjct: 258 WSESSSPATTPQ 269
>gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens]
Length = 663
Score = 33.5 bits (75), Expect = 0.75
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 381 HQMVRTDSREQKLDAFLQPLSKPLSSQPQAIV-------TEDKTDISSGRARQQDEEML- 432
H M++ + + Q+L L + P A + D + +S G +++E +
Sbjct: 223 HSMLQEEKKLQELQRCLVERRRNSEPPPAAALPLGRELSASDDSSLSDGLLLEEEESQVP 282
Query: 433 ----ELPAPAEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHREDSDVEMVEDDSR- 487
E PAP Q+LEG G S +R P ++P K D E S
Sbjct: 283 KPPPESPAPPSRPLPPQTLEGLQPTGPEAGSPERAPVQNSPWKETSLDHPYEKPRKSSEP 342
Query: 488 --KEMTAACTPR 497
+ + A TP+
Sbjct: 343 WSESSSPATTPQ 354
>gi|83415174 hypothetical protein LOC400818 [Homo sapiens]
Length = 942
Score = 33.5 bits (75), Expect = 0.75
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 384 VRTDSREQKLDAFLQPL------SKPLSSQPQAIVTEDKTDISSGRARQQDEEMLELPAP 437
V S+E++L + L S+ L+ QA++T D+ D S G+ Q E++ E
Sbjct: 97 VLVHSQERELTQLKEKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQ--EQLAEGCRL 154
Query: 438 AEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHREDSDVEMVEDDSRKEMTAACT 495
A+ + S E D + E+ +P R + ++ V +DS +E C+
Sbjct: 155 AQHLVQKLSPENDEDEDEDVQVEEDEKVLESPAPREVQKAEESKVTEDSLEECAITCS 212
>gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo
sapiens]
Length = 788
Score = 33.1 bits (74), Expect = 0.98
Identities = 49/239 (20%), Positives = 103/239 (43%), Gaps = 23/239 (9%)
Query: 417 TDISSGRARQQDEEMLELPAPAEVAAKNQSL-EGDTTKGTSEMSEKRGPTSSNPRKRHRE 475
T ++ G + E+ +++ A E + + + EG+ T+G+ E ++ T P E
Sbjct: 441 TKVAQGATEKSPEDKVQIAANEETQEREEQMKEGEETEGSEEDDKENDKTEEMPNDSVLE 500
Query: 476 DSDVEMVEDDSRKEMTAACTPRRRIINLTSVLSLQEEINE------QGHEVLREM-LHNH 528
+ ++ E++ + A +++L ++ ++E E Q H L E+ + +
Sbjct: 501 NKSLQENEEEEIGNLELAWD----MLDLAKIIFKRQETKEAQLYAAQAHLKLGEVSVESE 556
Query: 529 SFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQI-LIYDF---ANFGVLRLSEPAPLFD 584
++V V ++ + + YL +L E YQ+ L Y + + V + S+ + +
Sbjct: 557 NYVQAVE-EFQSCLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIE 615
Query: 585 LAMLALDS--PESGWTEEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEEGNLIGLPL 641
M L+ E+ + + KE E + E L + E + D + E GN+ L L
Sbjct: 616 NRMAVLNEQVKEAEGSSAEYKKE--IEELKELLPEIREKIED--AKESQRSGNVAELAL 670
>gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo
sapiens]
Length = 790
Score = 33.1 bits (74), Expect = 0.98
Identities = 49/239 (20%), Positives = 103/239 (43%), Gaps = 23/239 (9%)
Query: 417 TDISSGRARQQDEEMLELPAPAEVAAKNQSL-EGDTTKGTSEMSEKRGPTSSNPRKRHRE 475
T ++ G + E+ +++ A E + + + EG+ T+G+ E ++ T P E
Sbjct: 443 TKVAQGATEKSPEDKVQIAANEETQEREEQMKEGEETEGSEEDDKENDKTEEMPNDSVLE 502
Query: 476 DSDVEMVEDDSRKEMTAACTPRRRIINLTSVLSLQEEINE------QGHEVLREM-LHNH 528
+ ++ E++ + A +++L ++ ++E E Q H L E+ + +
Sbjct: 503 NKSLQENEEEEIGNLELAWD----MLDLAKIIFKRQETKEAQLYAAQAHLKLGEVSVESE 558
Query: 529 SFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQI-LIYDF---ANFGVLRLSEPAPLFD 584
++V V ++ + + YL +L E YQ+ L Y + + V + S+ + +
Sbjct: 559 NYVQAVE-EFQSCLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIE 617
Query: 585 LAMLALDS--PESGWTEEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEEGNLIGLPL 641
M L+ E+ + + KE E + E L + E + D + E GN+ L L
Sbjct: 618 NRMAVLNEQVKEAEGSSAEYKKE--IEELKELLPEIREKIED--AKESQRSGNVAELAL 672
>gi|11067749 bromodomain containing protein 3 [Homo sapiens]
Length = 726
Score = 33.1 bits (74), Expect = 0.98
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Query: 350 PGLAGPSGEMV-----KSTTSLTSSSTSGSSDKVYAHQMVRTDSREQ------KLDAFLQ 398
P L P+ MV S +S SSS SGSSD + +EQ +L A Q
Sbjct: 423 PALPAPAAPMVSKGAESSRSSEESSSDSGSSDSEEERATRLAELQEQLKAVHEQLAALSQ 482
Query: 399 -PLSKPLSSQPQAIVTEDKTD----ISSGRARQQDEEMLELPAPAEVA--AKNQSLEGDT 451
P++KP + + + K D + + ++E+ ++ PA+ A K + + ++
Sbjct: 483 APVNKPKKKKEKKEKEKKKKDKEKEKEKHKVKAEEEKKAKVAPPAKQAQQKKAPAKKANS 542
Query: 452 TKGTSEMSEKRGPTSSNPRKRHREDSDVEMVEDDSRK 488
T +K G +S E+ + M D+ R+
Sbjct: 543 TTTAGRQLKKGGKQASASYDSEEEEEGLPMSYDEKRQ 579
>gi|82830428 gon-4-like isoform b [Homo sapiens]
Length = 1529
Score = 32.7 bits (73), Expect = 1.3
Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 13/129 (10%)
Query: 371 TSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQAIVTEDKTDISSGRARQQDEE 430
T S+++ + V + QK + QP P SSQ TD++ G ++
Sbjct: 1358 TGAPSEELSSAGEVTKQTVLQKEEERSQPTKTPSSSQEPPDEGTSGTDVNKGSSKNALSS 1417
Query: 431 M---LELPAPAEVAAKNQSLEGD---TTKGTSEMSEKRGPTSSNPRKRHREDSDVEMVED 484
M + L +P + S++G T G EK GP E+ D + +
Sbjct: 1418 MDPEVRLSSPPGKPEDSSSVDGQSVGTPVGPETGGEKNGP-------EEEEEEDFDDLTQ 1470
Query: 485 DSRKEMTAA 493
D EM++A
Sbjct: 1471 DEEDEMSSA 1479
>gi|41352705 kinesin family member 3C [Homo sapiens]
Length = 793
Score = 32.7 bits (73), Expect = 1.3
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 382 QMVRTDSREQKLDAFLQPLSKPLSSQPQAI------VTEDKTDISSGRARQQDEEMLELP 435
Q + + E+ ++ +LQ + L + AI V+E+K + + + ++ E
Sbjct: 446 QPILESALEKNMENYLQEQKERLEEEKAAIQDDRSLVSEEKQKLLEEKEKMLEDLRREQQ 505
Query: 436 APAEVAAKNQSLEG----------DTTKGTSEMSEKRGPTSSNPRKRHREDSDVEMVEDD 485
A +AAK +++E D T +M E + + ++R RE M+ D+
Sbjct: 506 ATELLAAKYKAMESKLLIGGRNIMDHTNEQQKMLELKRQEIAEQKRREREMQQEMMLRDE 565
Query: 486 SRKEMTAACTPRRRIINL---------TSVLSLQEEINEQGHEVLR 522
E+ T ++ + + + +++ EI +Q E +R
Sbjct: 566 ETMELRGTYTSLQQEVEVKTKKLKKLYAKLQAVKAEIQDQHDEYIR 611
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 32.7 bits (73), Expect = 1.3
Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 17/139 (12%)
Query: 361 KSTTSLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQAIVTEDKTDIS 420
K+ T L S SGSS +V DS+ + L P S P+ +DK +
Sbjct: 1568 KTRTPLRQRSRSGSSPEV--------DSKSR-----LSPRRSRSGSSPEV---KDKPR-A 1610
Query: 421 SGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHREDSDVE 480
+ RA+ + E APA A +S G ++KG E T S+P + +
Sbjct: 1611 APRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARR 1670
Query: 481 MVEDDSRKEMTAACTPRRR 499
+ + PRRR
Sbjct: 1671 GSRSSPEPKTKSRTPPRRR 1689
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 32.3 bits (72), Expect = 1.7
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 398 QPLSKPLSSQPQAIVTEDKTDIS-----SGRARQQDEEMLELPAPA-EVAAKNQ-SLEGD 450
+P++ SS ++ T D S S + ++ E LE PAP E N+ L+
Sbjct: 459 EPVASAHSSSAESESTSDSDSSSDSESESSSSDSEENEPLETPAPEPEPPTTNKWQLDNW 518
Query: 451 TTKGTSEMSEKRGPTSSNPRKRHRE 475
TK + + GP S+ P +RH E
Sbjct: 519 LTKVSQPAAPPEGPRSTEPPRRHPE 543
>gi|114158664 hypothetical protein LOC343505 [Homo sapiens]
Length = 421
Score = 32.3 bits (72), Expect = 1.7
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 401 SKPLSSQPQAIVTEDKTDISSGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMSE 460
S L+ QA++T DK D S G+ + E++ E A S E DT + ++ ++
Sbjct: 140 SHSLNQHLQALLTPDKHDNSQGQDFR--EQLAEGCRLARHLVHKLSPENDTDEDENDKTK 197
Query: 461 KRGPTSSNPRKRHREDSDVEMVEDDSRKE 489
+ +P R + ++ + V +DS +E
Sbjct: 198 ELDKVQESPAPREEQKAEEKEVPEDSLEE 226
>gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 32.0 bits (71), Expect = 2.2
Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 15/134 (11%)
Query: 356 SGEMVKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQAIVTED 415
S E V +T+ + K A + V T+ A K + + TE
Sbjct: 129 SNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKRGRPAATEV 188
Query: 416 KTDISSGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHRE 475
K GR + M++ P P+E + + S+K+G P+K+ ++
Sbjct: 189 KIPKPRGRPK-----MVKQPCPSESDIITEE----------DKSKKKGQEEKQPKKQPKK 233
Query: 476 DSDVEMVEDDSRKE 489
D + + ED RKE
Sbjct: 234 DEEGQKEEDKPRKE 247
>gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo
sapiens]
Length = 333
Score = 32.0 bits (71), Expect = 2.2
Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 15/134 (11%)
Query: 356 SGEMVKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQAIVTED 415
S E V +T+ + K A + V T+ A K + + TE
Sbjct: 129 SNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKRGRPAATEV 188
Query: 416 KTDISSGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHRE 475
K GR + M++ P P+E + + S+K+G P+K+ ++
Sbjct: 189 KIPKPRGRPK-----MVKQPCPSESDIITEE----------DKSKKKGQEEKQPKKQPKK 233
Query: 476 DSDVEMVEDDSRKE 489
D + + ED RKE
Sbjct: 234 DEEGQKEEDKPRKE 247
>gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 32.0 bits (71), Expect = 2.2
Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 15/134 (11%)
Query: 356 SGEMVKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQAIVTED 415
S E V +T+ + K A + V T+ A K + + TE
Sbjct: 129 SNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKRGRPAATEV 188
Query: 416 KTDISSGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHRE 475
K GR + M++ P P+E + + S+K+G P+K+ ++
Sbjct: 189 KIPKPRGRPK-----MVKQPCPSESDIITEE----------DKSKKKGQEEKQPKKQPKK 233
Query: 476 DSDVEMVEDDSRKE 489
D + + ED RKE
Sbjct: 234 DEEGQKEEDKPRKE 247
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,811,258
Number of Sequences: 37866
Number of extensions: 1223916
Number of successful extensions: 4177
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 4115
Number of HSP's gapped (non-prelim): 110
length of query: 756
length of database: 18,247,518
effective HSP length: 110
effective length of query: 646
effective length of database: 14,082,258
effective search space: 9097138668
effective search space used: 9097138668
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.