Guide to the Human Genome
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Name: WDR76 Sequence: fasta or formatted (626aa) NCBI GI: 13376367
Description:

WD repeat domain 76

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         40           3
 C cysteine            2.1         13           1
 D aspartate           4.5         28           1
 E glutamate           5.6         35           2
 F phenylalanine       3.7         23           2
 G glycine             5.1         32           2
 H histidine           2.9         18           1
 I isoleucine          4.5         28           2
 K lysine              6.9         43           2
 L leucine             7.8         49           2
 M methionine          2.7         17           1
 N asparagine          4.8         30           2
 P proline             5.9         37           2
 Q glutamine           3.2         20           2
 R arginine            6.5         41           2
 S serine             11.7         73           3
 T threonine           6.9         43           2
 V valine              5.6         35           2
 W tryptophan          0.6          4           1
 Y tyrosine            2.7         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 76 
DDB2                  0.024   damage-specific DNA binding protein 2 
WDR24                 0.018   WD repeat domain 24 
PWP1                  0.015   periodic tryptophan protein 1 
RFWD2                 0.015   ring finger and WD repeat domain 2 isoform a 
RFWD2                 0.015   ring finger and WD repeat domain 2 isoform d24 [Homo...
FHOD1                 0.014   formin homology 2 domain containing 1 
PEX7                  0.013   peroxisomal biogenesis factor 7 
GTF2F1                0.012   general transcription factor IIF, polypeptide 1, 74...
HMGXB4                0.011   high-mobility group protein 2-like 1 
PHRF1                 0.011   PHD and ring finger domains 1 
CORO2A                0.011   coronin, actin binding protein, 2A 
CORO2A                0.011   coronin, actin binding protein, 2A 
TTN                   0.011   titin isoform N2-A 
TTN                   0.011   titin isoform novex-2 
TTN                   0.011   titin isoform novex-1 
TTN                   0.011   titin isoform N2-B 
TSHZ3                 0.010   zinc finger protein 537 
CORO7                 0.010   coronin 7 
NUP43                 0.009   nucleoporin 43kDa 
CIC                   0.009   capicua homolog 
FAM50A                0.008   XAP-5 protein 
PIK3R4                0.008   phosphoinositide-3-kinase, regulatory subunit 4 [Hom...
DYNC1I2               0.008   dynein, cytoplasmic 1, intermediate chain 2 
MLH1                  0.008   MutL protein homolog 1 
GNB2L1                0.008   guanine nucleotide binding protein (G protein), beta ...
NFRKB                 0.008   nuclear factor related to kappaB binding protein is...
NFRKB                 0.008   nuclear factor related to kappaB binding protein iso...
LAMA5                 0.008   laminin alpha 5 
LOC643446             0.007   PREDICTED: similar to ribonucleic acid binding prot...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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