Guide to the Human Genome
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Name: EPSTI1 Sequence: fasta or formatted (410aa) NCBI GI: 50428917
Description:

epithelial stromal interaction 1 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {307aa} epithelial stromal interaction 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         26           2
 C cysteine            1.2          5           1
 D aspartate           2.7         11           1
 E glutamate          10.0         41           2
 F phenylalanine       2.4         10           2
 G glycine             4.4         18           2
 H histidine           2.4         10           1
 I isoleucine          3.7         15           1
 K lysine              7.3         30           2
 L leucine            11.5         47           3
 M methionine          1.5          6           1
 N asparagine          4.9         20           2
 P proline             4.6         19           1
 Q glutamine           8.0         33           3
 R arginine            9.0         37           2
 S serine              8.3         34           2
 T threonine           3.9         16           1
 V valine              4.1         17           2
 W tryptophan          2.0          8           1
 Y tyrosine            1.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epithelial stromal interaction 1 isoform 1 
EPSTI1                0.726   epithelial stromal interaction 1 isoform 2 
TCHH                  0.052   trichohyalin 
GIGYF2                0.049   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.049   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.049   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.049   GRB10 interacting GYF protein 2 isoform b 
MAP7D1                0.046   MAP7 domain containing 1 
KIAA1211              0.038   hypothetical protein LOC57482 
MAP7                  0.038   microtubule-associated protein 7 
SFRS17A               0.036   DNA segment on chromosome X and Y (unique) 155 expre...
LOC727832             0.035   golgi autoantigen, golgin subfamily a-like 
GOLGA4                0.033   golgi autoantigen, golgin subfamily a, 4 
LOC283767             0.033   golgi autoantigen, golgin subfamily a-like 
MYH9                  0.031   myosin, heavy polypeptide 9, non-muscle 
LOC440243             0.031   PREDICTED: Putative golgin subfamily A member 6-lik...
INCENP                0.031   inner centromere protein antigens 135/155kDa isofor...
MLL2                  0.030   myeloid/lymphoid or mixed-lineage leukemia 2 
INCENP                0.030   inner centromere protein antigens 135/155kDa isofor...
KIF16B                0.030   kinesin-like motor protein C20orf23 
PCNT                  0.029   pericentrin 
LOC283685             0.029   PREDICTED: golgi autoantigen, golgin subfamily a-li...
ARGLU1                0.029   arginine and glutamate rich 1 
PHLDB3                0.029   pleckstrin homology-like domain, family B, member 3...
LOC283685             0.028   PREDICTED: golgi autoantigen, golgin subfamily a-li...
APLP2                 0.028   amyloid beta (A4) precursor-like protein 2 isoform ...
APLP2                 0.028   amyloid beta (A4) precursor-like protein 2 isoform ...
APLP2                 0.028   amyloid beta (A4) precursor-like protein 2 isoform ...
APLP2                 0.028   amyloid beta (A4) precursor-like protein 2 isoform 1 ...
STK10                 0.028   serine/threonine kinase 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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