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Search of human proteins with 45267839
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45267839 mesoderm induction early response 1, family member
2 [Homo sapiens]
(545 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45267839 mesoderm induction early response 1, family member 2... 1117 0.0
gi|94721313 mesoderm induction early response 1, family member 3... 308 6e-84
gi|118130872 mesoderm induction early response 1 isoform f [Homo... 297 1e-80
gi|118130815 mesoderm induction early response 1 isoform c [Homo... 297 1e-80
gi|225735631 mesoderm induction early response 1 isoform g [Homo... 297 2e-80
gi|225735615 mesoderm induction early response 1 isoform a [Homo... 297 2e-80
gi|225735612 mesoderm induction early response 1 isoform e [Homo... 297 2e-80
gi|225735610 mesoderm induction early response 1 isoform d [Homo... 297 2e-80
gi|225735607 mesoderm induction early response 1 isoform b [Homo... 297 2e-80
gi|225735605 mesoderm induction early response 1 isoform a [Homo... 297 2e-80
gi|225735617 mesoderm induction early response 1 isoform h [Homo... 292 5e-79
gi|225735619 mesoderm induction early response 1 isoform i [Homo... 285 6e-77
gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens] 66 7e-11
gi|210031154 zinc finger protein 541 [Homo sapiens] 63 6e-10
gi|7661892 REST corepressor 1 [Homo sapiens] 63 8e-10
gi|209977084 REST corepressor 3 isoform c [Homo sapiens] 62 2e-09
gi|209977080 REST corepressor 3 isoform a [Homo sapiens] 62 2e-09
gi|209977082 REST corepressor 3 isoform b [Homo sapiens] 61 2e-09
gi|115527080 metastasis associated protein [Homo sapiens] 58 2e-08
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 58 2e-08
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 58 2e-08
gi|8922733 REST corepressor 3 isoform d [Homo sapiens] 56 1e-07
gi|14141170 metastasis-associated protein 2 [Homo sapiens] 55 2e-07
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 51 2e-06
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 51 2e-06
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 49 1e-05
gi|15812226 transcriptional regulating factor 1 [Homo sapiens] 49 2e-05
gi|112807226 hypothetical protein LOC91748 [Homo sapiens] 48 3e-05
gi|44890062 hypothetical protein LOC91748 [Homo sapiens] 48 3e-05
gi|27734799 REST corepressor 2 [Homo sapiens] 47 3e-05
>gi|45267839 mesoderm induction early response 1, family member 2
[Homo sapiens]
Length = 545
Score = 1117 bits (2890), Expect = 0.0
Identities = 545/545 (100%), Positives = 545/545 (100%)
Query: 1 MAEASSLGRQSPRVVSCLEHSLCPGEPGLQTTAVVSMGSGDHQFNLAEILSQNYSVRGEC 60
MAEASSLGRQSPRVVSCLEHSLCPGEPGLQTTAVVSMGSGDHQFNLAEILSQNYSVRGEC
Sbjct: 1 MAEASSLGRQSPRVVSCLEHSLCPGEPGLQTTAVVSMGSGDHQFNLAEILSQNYSVRGEC 60
Query: 61 EEASRCPDKPKEELEKDFISQSNDMPFDELLALYGYEASDPISDRESEGGDVAPNLPDMT 120
EEASRCPDKPKEELEKDFISQSNDMPFDELLALYGYEASDPISDRESEGGDVAPNLPDMT
Sbjct: 61 EEASRCPDKPKEELEKDFISQSNDMPFDELLALYGYEASDPISDRESEGGDVAPNLPDMT 120
Query: 121 LDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSAS 180
LDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSAS
Sbjct: 121 LDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSAS 180
Query: 181 SDTEEDSLPANKCKKEIMVGPQFQADLSNLHLNRHCEKIYENEDQLLWDPSVLPEREVEE 240
SDTEEDSLPANKCKKEIMVGPQFQADLSNLHLNRHCEKIYENEDQLLWDPSVLPEREVEE
Sbjct: 181 SDTEEDSLPANKCKKEIMVGPQFQADLSNLHLNRHCEKIYENEDQLLWDPSVLPEREVEE 240
Query: 241 FLYRAVKRRWHEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLC 300
FLYRAVKRRWHEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLC
Sbjct: 241 FLYRAVKRRWHEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLC 300
Query: 301 AWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLG 360
AWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLG
Sbjct: 301 AWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLG 360
Query: 361 RRKYVPSGTTDADQDLDGSDPDGPGRPRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
RRKYVPSGTTDADQDLDGSDPDGPGRPRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG
Sbjct: 361 RRKYVPSGTTDADQDLDGSDPDGPGRPRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
Query: 421 LPSSEPGPCSFQQLDESPAVPLSHRPPALADPASYQPAVTAPEPDASPRLAVDFALPKEL 480
LPSSEPGPCSFQQLDESPAVPLSHRPPALADPASYQPAVTAPEPDASPRLAVDFALPKEL
Sbjct: 421 LPSSEPGPCSFQQLDESPAVPLSHRPPALADPASYQPAVTAPEPDASPRLAVDFALPKEL 480
Query: 481 PLISSHVDLSGDPEETVAPAQVALSVTEFGLIGIGDVNPFLAAHPTCPAPGLHSEPLSHC 540
PLISSHVDLSGDPEETVAPAQVALSVTEFGLIGIGDVNPFLAAHPTCPAPGLHSEPLSHC
Sbjct: 481 PLISSHVDLSGDPEETVAPAQVALSVTEFGLIGIGDVNPFLAAHPTCPAPGLHSEPLSHC 540
Query: 541 NVMTC 545
NVMTC
Sbjct: 541 NVMTC 545
>gi|94721313 mesoderm induction early response 1, family member 3
[Homo sapiens]
Length = 549
Score = 308 bits (790), Expect = 6e-84
Identities = 210/550 (38%), Positives = 292/550 (53%), Gaps = 54/550 (9%)
Query: 31 TTAVVSMGSGDHQFN-LAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSNDMPFDE 89
++ V S+ S DH F+ AE+L +Y EE + E + + + MP ++
Sbjct: 9 SSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEGTMPLED 68
Query: 90 LLALYGYEASDPI---SDRESEGGDVAPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDL 146
LLA YGYE + P S S ++A LPDMTLDKE+IAKDLLSG++EE TQSSADDL
Sbjct: 69 LLAFYGYEPTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEE-TQSSADDL 127
Query: 147 TPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANK-CKKEIMVGPQFQA 205
TPSVTSHE SD FP S D D+E S D E DS + + +KEIM+G Q+QA
Sbjct: 128 TPSVTSHETSDFFPRPLRSNTACDGDKE---SEVEDVETDSGNSPEDLRKEIMIGLQYQA 184
Query: 206 DLSNLHLNRHC--EKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEGEA 263
++ +L + EK+YENEDQLLW P V+ E +V+E+L R E ++ G
Sbjct: 185 EIPP-YLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIMDRISAGTH 243
Query: 264 VKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHL 323
+D+EQALYEL+KCN N++EA+ R N K + G+ AW+EEECR+FEH + GK+FHL
Sbjct: 244 TRDNEQALYELLKCNHNIKEAIERYCCNGKASQ-GMTAWTEEECRSFEHALMLFGKDFHL 302
Query: 324 IQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY--VPSGTTDADQDLDGSDP 381
IQ NKVRTR+V ECV +YY+WKKSERYDYFAQQTR G+++Y P T D+ +D ++
Sbjct: 303 IQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDETEA 362
Query: 382 DGPGRPRPEQDTLTGMRTDP-----LSVDGTAGGLDEPGVASDGLPSSEPGPC-----SF 431
G LT R +P L++ + D + + +P SF
Sbjct: 363 LG---GTVNASALTSNRPEPIPDQQLNILNSFTASDLTALTNSVATVCDPTDVNCLDDSF 419
Query: 432 QQLDESPAVPLSHRPPALAD---------------------PASYQPAVTAPEPDASP-- 468
L +P ++H P + + P E P
Sbjct: 420 PPLGNTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAK 479
Query: 469 RLAVDFALPKELPLISSHVDLSGDPE---ETVAPAQVALSVTEFGLIGIGDVNPFLAAHP 525
RL + A+P+ S +L D E + A++A+SV +FG + + N F++AH
Sbjct: 480 RLKMGIAVPESFMNEVSVNNLGVDFENHTHHITSAKMAVSVADFGSLSANETNGFISAHA 539
Query: 526 TCPAPGLHSE 535
LHSE
Sbjct: 540 LHQHAALHSE 549
>gi|118130872 mesoderm induction early response 1 isoform f [Homo
sapiens]
Length = 433
Score = 297 bits (761), Expect = 1e-80
Identities = 180/413 (43%), Positives = 243/413 (58%), Gaps = 24/413 (5%)
Query: 26 EPGLQTTAVV-SMGSGDHQFN-LAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSN 83
EP +++++ S S DH+F+ A++L ++ EE + E + +++
Sbjct: 3 EPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREG 62
Query: 84 DMPFDELLALYGY-------EASDPISDRESEG-----GDVAPNLPDMTLDKEQIAKDLL 131
DMP ELL+LYGY E + + E EG D N +KE+ KD
Sbjct: 63 DMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD-- 120
Query: 132 SGEEEEETQSSADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPAN 191
S +E+ETQSS DD + SV S +A ++ R F + + E S+ +ED +P+
Sbjct: 121 SSGQEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEE----ESEEDEDYIPSE 176
Query: 192 KCKKEIMVGPQFQADLS-NLHLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRW 250
KKEIMVG FQA++ + + EK+YEN+DQLLWDP LPE +V FL A +R
Sbjct: 177 DWKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTG 236
Query: 251 HEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNF 310
E +PEG +KD+EQALYELVKCNF+ EEALRRLRFNVK R+ L W+EEECRNF
Sbjct: 237 DEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNF 296
Query: 311 EHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGT 369
E G + +GK+FHLIQANKVRTRSVGECV +YY+WKKSERYD+FAQQTR G++KY + G
Sbjct: 297 EQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGV 356
Query: 370 TD-ADQDLDGSDPDGPGR-PRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
TD D+ LD S+ R P P + DGT ++ GV+S+G
Sbjct: 357 TDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNG 409
>gi|118130815 mesoderm induction early response 1 isoform c [Homo
sapiens]
Length = 512
Score = 297 bits (761), Expect = 1e-80
Identities = 180/413 (43%), Positives = 243/413 (58%), Gaps = 24/413 (5%)
Query: 26 EPGLQTTAVV-SMGSGDHQFN-LAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSN 83
EP +++++ S S DH+F+ A++L ++ EE + E + +++
Sbjct: 3 EPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREG 62
Query: 84 DMPFDELLALYGY-------EASDPISDRESEG-----GDVAPNLPDMTLDKEQIAKDLL 131
DMP ELL+LYGY E + + E EG D N +KE+ KD
Sbjct: 63 DMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD-- 120
Query: 132 SGEEEEETQSSADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPAN 191
S +E+ETQSS DD + SV S +A ++ R F + + E S+ +ED +P+
Sbjct: 121 SSGQEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEE----ESEEDEDYIPSE 176
Query: 192 KCKKEIMVGPQFQADLS-NLHLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRW 250
KKEIMVG FQA++ + + EK+YEN+DQLLWDP LPE +V FL A +R
Sbjct: 177 DWKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTG 236
Query: 251 HEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNF 310
E +PEG +KD+EQALYELVKCNF+ EEALRRLRFNVK R+ L W+EEECRNF
Sbjct: 237 DEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNF 296
Query: 311 EHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGT 369
E G + +GK+FHLIQANKVRTRSVGECV +YY+WKKSERYD+FAQQTR G++KY + G
Sbjct: 297 EQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGV 356
Query: 370 TD-ADQDLDGSDPDGPGR-PRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
TD D+ LD S+ R P P + DGT ++ GV+S+G
Sbjct: 357 TDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNG 409
>gi|225735631 mesoderm induction early response 1 isoform g [Homo
sapiens]
Length = 470
Score = 297 bits (760), Expect = 2e-80
Identities = 178/402 (44%), Positives = 236/402 (58%), Gaps = 23/402 (5%)
Query: 36 SMGSGDHQFN-LAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSNDMPFDELLALY 94
S S DH+F+ A++L ++ EE + E + +++ DMP ELL+LY
Sbjct: 31 SATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLY 90
Query: 95 GY-------EASDPISDRESEG-----GDVAPNLPDMTLDKEQIAKDLLSGEEEEETQSS 142
GY E + + E EG D N +KE+ KD S +E+ETQSS
Sbjct: 91 GYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD--SSGQEDETQSS 148
Query: 143 ADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANKCKKEIMVGPQ 202
DD + SV S +A ++ R F + + E S+ +ED +P+ KKEIMVG
Sbjct: 149 NDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEE----ESEEDEDYIPSEDWKKEIMVGSM 204
Query: 203 FQADLS-NLHLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEG 261
FQA++ + + EK+YEN+DQLLWDP LPE +V FL A +R E +PEG
Sbjct: 205 FQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEG 264
Query: 262 EAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNF 321
+KD+EQALYELVKCNF+ EEALRRLRFNVK R+ L W+EEECRNFE G + +GK+F
Sbjct: 265 SHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDF 324
Query: 322 HLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGTTD-ADQDLDGS 379
HLIQANKVRTRSVGECV +YY+WKKSERYD+FAQQTR G++KY + G TD D+ LD S
Sbjct: 325 HLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDES 384
Query: 380 DPDGPGR-PRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
+ R P P + DGT ++ GV+S+G
Sbjct: 385 ESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNG 426
>gi|225735615 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 297 bits (760), Expect = 2e-80
Identities = 178/402 (44%), Positives = 236/402 (58%), Gaps = 23/402 (5%)
Query: 36 SMGSGDHQFN-LAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSNDMPFDELLALY 94
S S DH+F+ A++L ++ EE + E + +++ DMP ELL+LY
Sbjct: 31 SATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLY 90
Query: 95 GY-------EASDPISDRESEG-----GDVAPNLPDMTLDKEQIAKDLLSGEEEEETQSS 142
GY E + + E EG D N +KE+ KD S +E+ETQSS
Sbjct: 91 GYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD--SSGQEDETQSS 148
Query: 143 ADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANKCKKEIMVGPQ 202
DD + SV S +A ++ R F + + E S+ +ED +P+ KKEIMVG
Sbjct: 149 NDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEE----ESEEDEDYIPSEDWKKEIMVGSM 204
Query: 203 FQADLS-NLHLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEG 261
FQA++ + + EK+YEN+DQLLWDP LPE +V FL A +R E +PEG
Sbjct: 205 FQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEG 264
Query: 262 EAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNF 321
+KD+EQALYELVKCNF+ EEALRRLRFNVK R+ L W+EEECRNFE G + +GK+F
Sbjct: 265 SHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDF 324
Query: 322 HLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGTTD-ADQDLDGS 379
HLIQANKVRTRSVGECV +YY+WKKSERYD+FAQQTR G++KY + G TD D+ LD S
Sbjct: 325 HLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDES 384
Query: 380 DPDGPGR-PRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
+ R P P + DGT ++ GV+S+G
Sbjct: 385 ESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNG 426
>gi|225735612 mesoderm induction early response 1 isoform e [Homo
sapiens]
Length = 486
Score = 297 bits (760), Expect = 2e-80
Identities = 178/402 (44%), Positives = 236/402 (58%), Gaps = 23/402 (5%)
Query: 36 SMGSGDHQFN-LAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSNDMPFDELLALY 94
S S DH+F+ A++L ++ EE + E + +++ DMP ELL+LY
Sbjct: 67 SATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLY 126
Query: 95 GY-------EASDPISDRESEG-----GDVAPNLPDMTLDKEQIAKDLLSGEEEEETQSS 142
GY E + + E EG D N +KE+ KD S +E+ETQSS
Sbjct: 127 GYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD--SSGQEDETQSS 184
Query: 143 ADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANKCKKEIMVGPQ 202
DD + SV S +A ++ R F + + E S+ +ED +P+ KKEIMVG
Sbjct: 185 NDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEE----ESEEDEDYIPSEDWKKEIMVGSM 240
Query: 203 FQADLS-NLHLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEG 261
FQA++ + + EK+YEN+DQLLWDP LPE +V FL A +R E +PEG
Sbjct: 241 FQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEG 300
Query: 262 EAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNF 321
+KD+EQALYELVKCNF+ EEALRRLRFNVK R+ L W+EEECRNFE G + +GK+F
Sbjct: 301 SHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDF 360
Query: 322 HLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGTTD-ADQDLDGS 379
HLIQANKVRTRSVGECV +YY+WKKSERYD+FAQQTR G++KY + G TD D+ LD S
Sbjct: 361 HLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDES 420
Query: 380 DPDGPGR-PRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
+ R P P + DGT ++ GV+S+G
Sbjct: 421 ESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNG 462
>gi|225735610 mesoderm induction early response 1 isoform d [Homo
sapiens]
Length = 450
Score = 297 bits (760), Expect = 2e-80
Identities = 178/402 (44%), Positives = 236/402 (58%), Gaps = 23/402 (5%)
Query: 36 SMGSGDHQFN-LAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSNDMPFDELLALY 94
S S DH+F+ A++L ++ EE + E + +++ DMP ELL+LY
Sbjct: 31 SATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLY 90
Query: 95 GY-------EASDPISDRESEG-----GDVAPNLPDMTLDKEQIAKDLLSGEEEEETQSS 142
GY E + + E EG D N +KE+ KD S +E+ETQSS
Sbjct: 91 GYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD--SSGQEDETQSS 148
Query: 143 ADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANKCKKEIMVGPQ 202
DD + SV S +A ++ R F + + E S+ +ED +P+ KKEIMVG
Sbjct: 149 NDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEE----ESEEDEDYIPSEDWKKEIMVGSM 204
Query: 203 FQADLS-NLHLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEG 261
FQA++ + + EK+YEN+DQLLWDP LPE +V FL A +R E +PEG
Sbjct: 205 FQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEG 264
Query: 262 EAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNF 321
+KD+EQALYELVKCNF+ EEALRRLRFNVK R+ L W+EEECRNFE G + +GK+F
Sbjct: 265 SHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDF 324
Query: 322 HLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGTTD-ADQDLDGS 379
HLIQANKVRTRSVGECV +YY+WKKSERYD+FAQQTR G++KY + G TD D+ LD S
Sbjct: 325 HLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDES 384
Query: 380 DPDGPGR-PRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
+ R P P + DGT ++ GV+S+G
Sbjct: 385 ESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNG 426
>gi|225735607 mesoderm induction early response 1 isoform b [Homo
sapiens]
Length = 565
Score = 297 bits (760), Expect = 2e-80
Identities = 178/402 (44%), Positives = 236/402 (58%), Gaps = 23/402 (5%)
Query: 36 SMGSGDHQFN-LAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSNDMPFDELLALY 94
S S DH+F+ A++L ++ EE + E + +++ DMP ELL+LY
Sbjct: 67 SATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLY 126
Query: 95 GY-------EASDPISDRESEG-----GDVAPNLPDMTLDKEQIAKDLLSGEEEEETQSS 142
GY E + + E EG D N +KE+ KD S +E+ETQSS
Sbjct: 127 GYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD--SSGQEDETQSS 184
Query: 143 ADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANKCKKEIMVGPQ 202
DD + SV S +A ++ R F + + E S+ +ED +P+ KKEIMVG
Sbjct: 185 NDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEE----ESEEDEDYIPSEDWKKEIMVGSM 240
Query: 203 FQADLS-NLHLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEG 261
FQA++ + + EK+YEN+DQLLWDP LPE +V FL A +R E +PEG
Sbjct: 241 FQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEG 300
Query: 262 EAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNF 321
+KD+EQALYELVKCNF+ EEALRRLRFNVK R+ L W+EEECRNFE G + +GK+F
Sbjct: 301 SHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDF 360
Query: 322 HLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGTTD-ADQDLDGS 379
HLIQANKVRTRSVGECV +YY+WKKSERYD+FAQQTR G++KY + G TD D+ LD S
Sbjct: 361 HLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDES 420
Query: 380 DPDGPGR-PRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
+ R P P + DGT ++ GV+S+G
Sbjct: 421 ESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNG 462
>gi|225735605 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 297 bits (760), Expect = 2e-80
Identities = 178/402 (44%), Positives = 236/402 (58%), Gaps = 23/402 (5%)
Query: 36 SMGSGDHQFN-LAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSNDMPFDELLALY 94
S S DH+F+ A++L ++ EE + E + +++ DMP ELL+LY
Sbjct: 31 SATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLY 90
Query: 95 GY-------EASDPISDRESEG-----GDVAPNLPDMTLDKEQIAKDLLSGEEEEETQSS 142
GY E + + E EG D N +KE+ KD S +E+ETQSS
Sbjct: 91 GYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD--SSGQEDETQSS 148
Query: 143 ADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANKCKKEIMVGPQ 202
DD + SV S +A ++ R F + + E S+ +ED +P+ KKEIMVG
Sbjct: 149 NDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEE----ESEEDEDYIPSEDWKKEIMVGSM 204
Query: 203 FQADLS-NLHLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEG 261
FQA++ + + EK+YEN+DQLLWDP LPE +V FL A +R E +PEG
Sbjct: 205 FQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEG 264
Query: 262 EAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNF 321
+KD+EQALYELVKCNF+ EEALRRLRFNVK R+ L W+EEECRNFE G + +GK+F
Sbjct: 265 SHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDF 324
Query: 322 HLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGTTD-ADQDLDGS 379
HLIQANKVRTRSVGECV +YY+WKKSERYD+FAQQTR G++KY + G TD D+ LD S
Sbjct: 325 HLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDES 384
Query: 380 DPDGPGR-PRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
+ R P P + DGT ++ GV+S+G
Sbjct: 385 ESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNG 426
>gi|225735617 mesoderm induction early response 1 isoform h [Homo
sapiens]
Length = 485
Score = 292 bits (748), Expect = 5e-79
Identities = 176/395 (44%), Positives = 228/395 (57%), Gaps = 32/395 (8%)
Query: 42 HQFNLAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSNDMPFDELLALYGY----- 96
H F+ L + + GE +S D +E DMP ELL+LYGY
Sbjct: 4 HDFDDERTLEEEEMMEGETNFSSEIEDLARE----------GDMPIHELLSLYGYGSTVR 53
Query: 97 --EASDPISDRESEG-----GDVAPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDLTPS 149
E + + E EG D N +KE+ KD S +E+ETQSS DD + S
Sbjct: 54 LPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD--SSGQEDETQSSNDDPSQS 111
Query: 150 VTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANKCKKEIMVGPQFQADLS- 208
V S +A ++ R F + + E S+ +ED +P+ KKEIMVG FQA++
Sbjct: 112 VASQDAQEIIRPRRCKYFDTNSEVEE----ESEEDEDYIPSEDWKKEIMVGSMFQAEIPV 167
Query: 209 NLHLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEGEAVKDSE 268
+ + EK+YEN+DQLLWDP LPE +V FL A +R E +PEG +KD+E
Sbjct: 168 GICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNE 227
Query: 269 QALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANK 328
QALYELVKCNF+ EEALRRLRFNVK R+ L W+EEECRNFE G + +GK+FHLIQANK
Sbjct: 228 QALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANK 287
Query: 329 VRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGTTD-ADQDLDGSDPDGPGR 386
VRTRSVGECV +YY+WKKSERYD+FAQQTR G++KY + G TD D+ LD S+ R
Sbjct: 288 VRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSR 347
Query: 387 -PRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
P P + DGT ++ GV+S+G
Sbjct: 348 APSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNG 382
>gi|225735619 mesoderm induction early response 1 isoform i [Homo
sapiens]
Length = 370
Score = 285 bits (730), Expect = 6e-77
Identities = 167/352 (47%), Positives = 214/352 (60%), Gaps = 22/352 (6%)
Query: 85 MPFDELLALYGY-------EASDPISDRESEG-----GDVAPNLPDMTLDKEQIAKDLLS 132
MP ELL+LYGY E + + E EG D N +KE+ KD S
Sbjct: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD--S 58
Query: 133 GEEEEETQSSADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANK 192
+E+ETQSS DD + SV S +A ++ R F + + E S+ +ED +P+
Sbjct: 59 SGQEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEE----ESEEDEDYIPSED 114
Query: 193 CKKEIMVGPQFQADLS-NLHLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWH 251
KKEIMVG FQA++ + + EK+YEN+DQLLWDP LPE +V FL A +R
Sbjct: 115 WKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGD 174
Query: 252 EMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFE 311
E +PEG +KD+EQALYELVKCNF+ EEALRRLRFNVK R+ L W+EEECRNFE
Sbjct: 175 EKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFE 234
Query: 312 HGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGTT 370
G + +GK+FHLIQANKVRTRSVGECV +YY+WKKSERYD+FAQQTR G++KY + G T
Sbjct: 235 QGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVT 294
Query: 371 D-ADQDLDGSDPDGPGR-PRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
D D+ LD S+ R P P + DGT ++ GV+S+G
Sbjct: 295 DYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNG 346
>gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens]
Length = 515
Score = 66.2 bits (160), Expect = 7e-11
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 29/237 (12%)
Query: 194 KKEIMVGPQFQADLSNLHLNRHCEKIYENEDQL-LWDP-SVLPEREVEEFLY--RAVKRR 249
K EI VGP++QAD+ + L ++ +++ ++ +WDP S L +R++++FL RAV
Sbjct: 147 KGEIRVGPRYQADIPEMLLEGESDEREQSKLEVKVWDPNSPLTDRQIDQFLVVARAVGTF 206
Query: 250 WHEM------AGPQLPEGEAVKDSEQALYE----LVKCNFNVEEALRRL--RFNVKVIRD 297
+ P L A + L+ L + ++++ A+ L + RD
Sbjct: 207 ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLYRHSYDLSSAISVLVPLGGPVLCRD 266
Query: 298 GLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQT 357
+ WS E FE +GK+F+ I+ + + +S+ +EYYY+WK ++RY QQ
Sbjct: 267 EMEEWSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRY---VQQK 323
Query: 358 RLGRRKYVPSGTTDADQDLDGSDPDGPGRPRPEQDTLTGMRTDPLSVDGTAGGLDEP 414
RL +A+ L +P P Q ++ P +V+G G +P
Sbjct: 324 RL--------KAAEAESKLKQVYIPTYSKPNPNQ--ISTSNGKPGAVNGAVGTTFQP 370
>gi|210031154 zinc finger protein 541 [Homo sapiens]
Length = 1365
Score = 63.2 bits (152), Expect = 6e-10
Identities = 73/277 (26%), Positives = 115/277 (41%), Gaps = 29/277 (10%)
Query: 151 TSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANKCKKEIMVGPQFQADLSNL 210
TS +AS P++ S L D G D + S+ + I +G +FQA++ L
Sbjct: 1036 TSTQAS---PDQLISSMLDQVDGSFGICVVKDDTKISI-----EPHINIGSRFQAEIPEL 1087
Query: 211 HLNRHCEKIYENEDQLLWDP--SVLPEREVEEFLYRAVKRRWHEMAGPQLPEGEAVKDSE 268
R E+ L+W P ++ E ++ V + +P G + E
Sbjct: 1088 Q-ERSLAGTDEHVASLVWKPWGDMMISSETQD----RVTELCNVACSSVMPGGGT--NLE 1140
Query: 269 QALYELVKCNFNVEEALRRLRFN------VKVIRD----GLCAWSEEECRNFEHGFRVHG 318
AL+ L + NV+ AL L ++ D G W+ E R F+ F H
Sbjct: 1141 LALHCLHEAQGNVQVALETLLLRGPHKPRTHLLADYRYTGSDVWTPIEKRLFKKAFYAHK 1200
Query: 319 KNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKYVPSGTTDADQDLDG 378
K+F+LI ++T++V +CVEYYY+WKK ++D R K P ++ +
Sbjct: 1201 KDFYLIH-KMIQTKTVAQCVEYYYIWKKMIKFDCGRAPGLEKRVKREPEEVERTEEKVPC 1259
Query: 379 SDPDGPG-RPRPEQDTLTGMRTDPLSVDGTAGGLDEP 414
S + P P P+ T + R LS AG P
Sbjct: 1260 SPRERPSHHPTPKLKTKSYRRESILSSSPNAGSKRTP 1296
>gi|7661892 REST corepressor 1 [Homo sapiens]
Length = 482
Score = 62.8 bits (151), Expect = 8e-10
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 32/231 (13%)
Query: 160 PNRSGSRFLADEDREPGSSASSDTEEDSLPANKCKKE-----IMVGPQFQA---DLSNLH 211
PN ++ LA P ++SS++ E+ + +E + VGPQ+QA D
Sbjct: 62 PNNGQNKSLAAA--APNGNSSSNSWEEGSSGSSSDEEHGGGGMRVGPQYQAVVPDFDPAK 119
Query: 212 LNRHCEKIYENEDQLLWDPSV-LPEREVEEFLYRAVKRRWHEMAGPQLPEGEAVKDSEQA 270
L R ++ +N L+W P+ L E +++E++ A ++ + M EQA
Sbjct: 120 LARRSQE-RDNLGMLVWSPNQNLSEAKLDEYIAIAKEKHGYNM--------------EQA 164
Query: 271 LYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVR 330
L L N+E++L L N D W+ E+ FE F HGK FH IQ +
Sbjct: 165 LGMLFWHKHNIEKSLADLP-NFTPFPD---EWTVEDKVLFEQAFSFHGKTFHRIQ-QMLP 219
Query: 331 TRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKYVPSGTTDADQDLDGSDP 381
+S+ V++YY WKK+ R ++K + D ++ +G++P
Sbjct: 220 DKSIASLVKFYYSWKKT-RTKTSVMDRHARKQKREREESEDELEEANGNNP 269
>gi|209977084 REST corepressor 3 isoform c [Homo sapiens]
Length = 449
Score = 61.6 bits (148), Expect = 2e-09
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 32/214 (14%)
Query: 174 EPGSSASSDTEEDSLPANKCKKEIMVGPQFQADLSNLHLNRHCEKIYENEDQLLWDP-SV 232
EP S SSD E D + VG ++QA + +N L+W P
Sbjct: 44 EPESGCSSDDEHDV--------GMRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHS 95
Query: 233 LPEREVEEFLYRAVKRRWHEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNV 292
+P+ +++E++ A ++ + + EQAL L N+E++L L N
Sbjct: 96 IPDAKLDEYIAIAKEKHGYNV--------------EQALGMLFWHKHNIEKSLADLP-NF 140
Query: 293 KVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKS-ERYD 351
D W+ E+ FE F HGK+FH IQ + +++ V+YYY WKK+ R
Sbjct: 141 TPFPD---EWTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTS 196
Query: 352 YFAQQTR-LGRRKYVPSGTTDADQ--DLDGSDPD 382
+Q R L R D ++ +DG+D D
Sbjct: 197 LMDRQARKLANRHNQGDSDDDVEETHPMDGNDSD 230
>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
Length = 553
Score = 61.6 bits (148), Expect = 2e-09
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 32/214 (14%)
Query: 174 EPGSSASSDTEEDSLPANKCKKEIMVGPQFQADLSNLHLNRHCEKIYENEDQLLWDP-SV 232
EP S SSD E D + VG ++QA + +N L+W P
Sbjct: 44 EPESGCSSDDEHDV--------GMRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHS 95
Query: 233 LPEREVEEFLYRAVKRRWHEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNV 292
+P+ +++E++ A ++ + + EQAL L N+E++L L N
Sbjct: 96 IPDAKLDEYIAIAKEKHGYNV--------------EQALGMLFWHKHNIEKSLADLP-NF 140
Query: 293 KVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKS-ERYD 351
D W+ E+ FE F HGK+FH IQ + +++ V+YYY WKK+ R
Sbjct: 141 TPFPD---EWTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTS 196
Query: 352 YFAQQTR-LGRRKYVPSGTTDADQ--DLDGSDPD 382
+Q R L R D ++ +DG+D D
Sbjct: 197 LMDRQARKLANRHNQGDSDDDVEETHPMDGNDSD 230
Score = 40.4 bits (93), Expect = 0.004
Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 22/183 (12%)
Query: 302 WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQ----- 356
W+ EE G R +GK+F I A+ + ++VG+ ++ +++ + Q+
Sbjct: 348 WTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQ 406
Query: 357 ---------TRLGRR----KYVPSGTTDADQDLDGSDPDGPGR--PRPEQDTLTGMRTDP 401
+ LG VPSG + D++ + P P P P + T T P
Sbjct: 407 GTQASNGDASTLGEETKSASNVPSGKS-TDEEEEAQTPQAPRTLGPSPPAPSSTPTPTAP 465
Query: 402 LSVDGTAGGLDEPGVASDGLPSSEPGPCSFQQLDESPAVPLSHRPPALADPASYQPAVTA 461
++ L P + + +P P Q P L+ PP L PA+ P
Sbjct: 466 IATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLN 525
Query: 462 PEP 464
P P
Sbjct: 526 PRP 528
>gi|209977082 REST corepressor 3 isoform b [Homo sapiens]
Length = 436
Score = 61.2 bits (147), Expect = 2e-09
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 174 EPGSSASSDTEEDSLPANKCKKEIMVGPQFQADLSNLHLNRHCEKIYENEDQLLWDP-SV 232
EP S SSD E D + VG ++QA + +N L+W P
Sbjct: 44 EPESGCSSDDEHDV--------GMRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHS 95
Query: 233 LPEREVEEFLYRAVKRRWHEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNV 292
+P+ ++E++ A ++ + + EQAL L N+E++L L N
Sbjct: 96 IPDARLDEYIAIAKEKHGYNV--------------EQALGMLFWHKHNIEKSLADLP-NF 140
Query: 293 KVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKS-ERYD 351
D W+ E+ FE F HGK+FH IQ + +++ V+YYY WKK+ R
Sbjct: 141 TPFPD---EWTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTS 196
Query: 352 YFAQQTR-LGRRKYVPSGTTDADQ--DLDGSDPD 382
+Q R L R D ++ +DG+D D
Sbjct: 197 LMDRQARKLANRHNQGDSDDDVEETHPMDGNDSD 230
>gi|115527080 metastasis associated protein [Homo sapiens]
Length = 715
Score = 58.2 bits (139), Expect = 2e-08
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 35/252 (13%)
Query: 182 DTEEDSLPANKCKKEIMVGPQFQADLSNLHLNRHCEKIYENEDQL---LWDP-SVLPERE 237
D ++ +L A+K EI VG ++QAD+++L + E+ ++ +L +W+ + L +++
Sbjct: 154 DPQQKTLLADK--GEIRVGNRYQADITDLL--KEGEEDGRDQSRLETQVWEAHNPLTDKQ 209
Query: 238 VEEFLYRAVKRRWHEMA--------GPQLPEGEAVKDSEQALYE----LVKCNFNVEEAL 285
+++FL A A P L A + L+ L K +++ +A+
Sbjct: 210 IDQFLVVARSVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAI 269
Query: 286 RRL--RFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYL 343
L + + RD + WS E FE +GK+F IQ + + +S+ +EYYY+
Sbjct: 270 SALVPQGGPVLCRDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYM 329
Query: 344 WKKSERYDYFAQQTRLGRRKYVPSGTTDADQDLDGSDPDGPGRPRPEQDTLTGMRTDPLS 403
WK ++RY QQ RL +A+ L +P P Q ++ ++
Sbjct: 330 WKTTDRY---VQQKRL--------KAAEAESKLKQVYIPNYNKPNPNQISVNNVKAG--V 376
Query: 404 VDGTAGGLDEPG 415
V+GT PG
Sbjct: 377 VNGTGAPGQSPG 388
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 58.2 bits (139), Expect = 2e-08
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 191 NKCKKEIMVGPQFQADLSNLHL--NRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKR 248
N + EI VGP QA L +L + + + ++E+ L+W P V + + +Y R
Sbjct: 280 NSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEE-LVWMPGV---NDCDLLMYLRAAR 335
Query: 249 RWHEMAGPQLPEGEAVKD----------SEQALYELVKCNFNVEEALRRL--RFNVKVIR 296
AG + +G + +D + AL L + ++ +AL+RL + K+I
Sbjct: 336 SMAAFAG--MCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIE 393
Query: 297 DGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKS 347
W+E+E + F G R +GKNF I+ + + GE + +YY WKK+
Sbjct: 394 K---CWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKT 441
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 58.2 bits (139), Expect = 2e-08
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 191 NKCKKEIMVGPQFQADLSNLHL--NRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKR 248
N + EI VGP QA L +L + + + ++E+ L+W P V + + +Y R
Sbjct: 280 NSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEE-LVWMPGV---NDCDLLMYLRAAR 335
Query: 249 RWHEMAGPQLPEGEAVKD----------SEQALYELVKCNFNVEEALRRL--RFNVKVIR 296
AG + +G + +D + AL L + ++ +AL+RL + K+I
Sbjct: 336 SMAAFAG--MCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIE 393
Query: 297 DGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKS 347
W+E+E + F G R +GKNF I+ + + GE + +YY WKK+
Sbjct: 394 K---CWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKT 441
>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
Length = 495
Score = 55.8 bits (133), Expect = 1e-07
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 24/189 (12%)
Query: 199 VGPQFQADLSNLHLNRHCEKIYENEDQLLWDP-SVLPEREVEEFLYRAVKRRWHEMAGPQ 257
VG ++QA + +N L+W P +P+ +++E++ A ++ + +
Sbjct: 3 VGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNV---- 58
Query: 258 LPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVH 317
EQAL L N+E++L L N D W+ E+ FE F H
Sbjct: 59 ----------EQALGMLFWHKHNIEKSLADLP-NFTPFPD---EWTVEDKVLFEQAFSFH 104
Query: 318 GKNFHLIQANKVRTRSVGECVEYYYLWKKS-ERYDYFAQQTR-LGRRKYVPSGTTDADQ- 374
GK+FH IQ + +++ V+YYY WKK+ R +Q R L R D ++
Sbjct: 105 GKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEET 163
Query: 375 -DLDGSDPD 382
+DG+D D
Sbjct: 164 HPMDGNDSD 172
Score = 40.4 bits (93), Expect = 0.004
Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 22/183 (12%)
Query: 302 WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQ----- 356
W+ EE G R +GK+F I A+ + ++VG+ ++ +++ + Q+
Sbjct: 290 WTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQ 348
Query: 357 ---------TRLGRR----KYVPSGTTDADQDLDGSDPDGPGR--PRPEQDTLTGMRTDP 401
+ LG VPSG + D++ + P P P P + T T P
Sbjct: 349 GTQASNGDASTLGEETKSASNVPSGKS-TDEEEEAQTPQAPRTLGPSPPAPSSTPTPTAP 407
Query: 402 LSVDGTAGGLDEPGVASDGLPSSEPGPCSFQQLDESPAVPLSHRPPALADPASYQPAVTA 461
++ L P + + +P P Q P L+ PP L PA+ P
Sbjct: 408 IATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLN 467
Query: 462 PEP 464
P P
Sbjct: 468 PRP 470
>gi|14141170 metastasis-associated protein 2 [Homo sapiens]
Length = 668
Score = 54.7 bits (130), Expect = 2e-07
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 196 EIMVGPQFQADLSNLHLNRHCEKIYENEDQL-LWDP-SVLPEREVEEFLY--RAVKRRWH 251
EI VG ++QA++ + + + + + ++ +WDP + L +R++++FL RAV
Sbjct: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFAR 205
Query: 252 EM------AGPQLPEGEAVKDSEQALYE----LVKCNFNVEEALRRL--RFNVKVIRDGL 299
+ P L A + L+ L + +++ +A+ L + + RD +
Sbjct: 206 ALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEM 265
Query: 300 CAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRL 359
WS E FE +GK+F+ I+ + + +S+ V++YY+WK ++RY QQ RL
Sbjct: 266 EEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY---IQQKRL 322
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 51.2 bits (121), Expect = 2e-06
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 302 WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGR 361
WSE+E F F H KNF LI A+ + ++V ECV YYYL KK+E Y L R
Sbjct: 432 WSEQEKETFREKFMQHPKNFGLI-ASFLERKTVAECVLYYYLTKKNENY------KSLVR 484
Query: 362 RKYVPSGTTDADQ 374
R Y G + Q
Sbjct: 485 RSYRRRGKSQQQQ 497
Score = 48.9 bits (115), Expect = 1e-05
Identities = 43/198 (21%), Positives = 76/198 (38%), Gaps = 35/198 (17%)
Query: 302 WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRL-- 359
W+EEE + G HG+N+ I A V +++V +C +Y+ +KK + D QQ +L
Sbjct: 615 WTEEEMETAKKGLLEHGRNWSAI-ARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKM 673
Query: 360 -------GRRKYVPSGTTD--------ADQDLDGSDPDGPGRPRPEQ-----------DT 393
++K P+ ++ D++++ S G E+ ++
Sbjct: 674 EKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSDTES 733
Query: 394 LTGMRTDPLSVDGTAGGLDEPGVASDGLPSSEPG------PCSFQQLDESPAVPLSHRPP 447
+ T+ G G + +DG P P P + S A PP
Sbjct: 734 IPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPP 793
Query: 448 ALADPASYQPAVTAPEPD 465
A P++ P V E +
Sbjct: 794 APPSPSAPPPVVPKEEKE 811
Score = 31.2 bits (69), Expect = 2.5
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 367 SGTTDADQ--DLDGSDPDGPGRPRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDGLPSS 424
S T AD+ + +G D + PRP T TG DP + LD + ++
Sbjct: 901 SATCSADEVDEAEGGDKNRLLSPRPSLLTPTG---DPRANASPQKPLDLKQLKQR---AA 954
Query: 425 EPGPCSFQQLDESP---AVPLSHRPPALADPASYQPAVTAP-EPDASPR 469
P ++ E P A P PPA P + QP AP +P +SPR
Sbjct: 955 AIPPIQVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR 1003
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 51.2 bits (121), Expect = 2e-06
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 302 WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGR 361
WSE+E F F H KNF LI A+ + ++V ECV YYYL KK+E Y L R
Sbjct: 432 WSEQEKETFREKFMQHPKNFGLI-ASFLERKTVAECVLYYYLTKKNENY------KSLVR 484
Query: 362 RKYVPSGTTDADQ 374
R Y G + Q
Sbjct: 485 RSYRRRGKSQQQQ 497
Score = 47.8 bits (112), Expect = 3e-05
Identities = 39/187 (20%), Positives = 70/187 (37%), Gaps = 30/187 (16%)
Query: 302 WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGR 361
W+EEE + G HG+N+ I A V +++V +C +Y+ +KK + D QQ +L
Sbjct: 615 WTEEEMETAKKGLLEHGRNWSAI-ARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKM 673
Query: 362 RKYVPSGTTDADQDLDGSDPDGPGRPRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDGL 421
K +++ P E + + + G +G +E ++ L
Sbjct: 674 EK---------ERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEAL 724
Query: 422 PSSE--------PGPCSFQQLDESPAVPLSH------------RPPALADPASYQPAVTA 461
+S GP + ++ ++P H +PPA P
Sbjct: 725 HASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPT 784
Query: 462 PEPDASP 468
P P+ P
Sbjct: 785 PPPEDIP 791
Score = 30.0 bits (66), Expect = 5.7
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 367 SGTTDADQ--DLDGSDPDGPGRPRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDGLPSS 424
S T AD+ + +G D + PRP T TG DP + LD + +
Sbjct: 918 SATCSADEVDEAEGGDKNRLLSPRPSLLTPTG---DPRANASPQKPLDLKQLKQRAA-AI 973
Query: 425 EPGPCSFQQLDESPAVPLSHRPPALADPASYQPAVTAP-EPDASPR 469
P + A P PPA P + QP AP +P +SPR
Sbjct: 974 PPIVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR 1019
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 48.9 bits (115), Expect = 1e-05
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 266 DSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQ 325
D+EQ + + N +E+ ++ V R + W++ E F+ F H KNF LI
Sbjct: 409 DAEQRRVKFINMNGLMEDPMK-----VYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLI- 462
Query: 326 ANKVRTRSVGECVEYYYLWKKSERYDYFAQQT---RLGRRKYV 365
A+ + +SV +CV YYYL KK+E Y ++ R GR + +
Sbjct: 463 ASYLERKSVPDCVLYYYLTKKNENYKALVRRNYGKRRGRNQQI 505
Score = 41.6 bits (96), Expect = 0.002
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 29/187 (15%)
Query: 302 WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGR 361
W+EEE + G HG+N+ I A V T+S +C +Y+ +K+ D QQ +
Sbjct: 628 WTEEEMEVAKKGLVEHGRNWAAI-AKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQKT 686
Query: 362 RKYVPSGTTDADQDLDGSDPDGPGRPRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDGL 421
+ +PR E+D + SV T ++ + +
Sbjct: 687 SR----------------------KPREERDV-----SQCESVASTVSAQEDEDIEASN- 718
Query: 422 PSSEPGPCSFQQLDESPAVPLSHRPPALADPASYQPAVTAPEPDASPRLAVDFALPKELP 481
P + + S P + +PA T P SP LAV P E
Sbjct: 719 EEENPEDSEVEAVKPSEDSPENATSRGNTEPAVELEPTTETAPSTSPSLAVPSTKPAEDE 778
Query: 482 LISSHVD 488
+ + V+
Sbjct: 779 SVETQVN 785
>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
Length = 1200
Score = 48.5 bits (114), Expect = 2e-05
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 197 IMVGPQFQADLSNLH-LNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAG 255
I +G +FQA++ L ++ + ++ L+W P PE E + L + V+ +
Sbjct: 781 INIGLRFQAEIPELQDISALAQDTHKAT--LVWKP--WPELENHD-LQQRVENLLNLCCS 835
Query: 256 PQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIR-----------DGLCAWSE 304
LP G +SE AL+ L + +V AL L K +R G W+
Sbjct: 836 SALPGGGT--NSEFALHSLFEAKGDVMVALEMLLLR-KPVRLKCHPLANYHYAGSDKWTS 892
Query: 305 EECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY 364
E + F + K+F +Q V++++V +CVEYYY WKK R +TRL
Sbjct: 893 LERKLFNKALATYSKDFIFVQ-KMVKSKTVAQCVEYYYTWKKIMRLGR-KHRTRLA-EII 949
Query: 365 VPSGTTDADQDLDGSDPDGPGRPR 388
T++ +++L+ + + P R
Sbjct: 950 DDCVTSEEEEELEEEEEEDPEEDR 973
>gi|112807226 hypothetical protein LOC91748 [Homo sapiens]
Length = 1045
Score = 47.8 bits (112), Expect = 3e-05
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 39/196 (19%)
Query: 197 IMVGPQFQADLSNLHLNRHCEKIYENEDQLLWDP------SVLPEREVEEFLYRAVKRRW 250
I VG +FQA++ L +R ++ L+W P S +R+VE+ L A +
Sbjct: 723 INVGSRFQAEIP-LMRDRALAAADPHKADLVWQPWEDLESSREKQRQVEDLLTAACSSIF 781
Query: 251 HEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRD-----------GL 299
A + E AL+ L + ++ E L +L K +R G
Sbjct: 782 PG----------AGTNQELALHCLHESRGDILETLNKLLLK-KPLRPHNHPLATYHYTGS 830
Query: 300 CAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRL 359
W E + F G ++ K+F L+Q ++T++V +CVE+YY +KK Q ++
Sbjct: 831 DQWKMAERKLFNKGIAIYKKDFFLVQ-KLIQTKTVAQCVEFYYTYKK---------QVKI 880
Query: 360 GRRKYVPSGTTDADQD 375
GR + G D +
Sbjct: 881 GRNGTLTFGDVDTSDE 896
>gi|44890062 hypothetical protein LOC91748 [Homo sapiens]
Length = 1045
Score = 47.8 bits (112), Expect = 3e-05
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 39/196 (19%)
Query: 197 IMVGPQFQADLSNLHLNRHCEKIYENEDQLLWDP------SVLPEREVEEFLYRAVKRRW 250
I VG +FQA++ L +R ++ L+W P S +R+VE+ L A +
Sbjct: 723 INVGSRFQAEIP-LMRDRALAAADPHKADLVWQPWEDLESSREKQRQVEDLLTAACSSIF 781
Query: 251 HEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRD-----------GL 299
A + E AL+ L + ++ E L +L K +R G
Sbjct: 782 PG----------AGTNQELALHCLHESRGDILETLNKLLLK-KPLRPHNHPLATYHYTGS 830
Query: 300 CAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRL 359
W E + F G ++ K+F L+Q ++T++V +CVE+YY +KK Q ++
Sbjct: 831 DQWKMAERKLFNKGIAIYKKDFFLVQ-KLIQTKTVAQCVEFYYTYKK---------QVKI 880
Query: 360 GRRKYVPSGTTDADQD 375
GR + G D +
Sbjct: 881 GRNGTLTFGDVDTSDE 896
>gi|27734799 REST corepressor 2 [Homo sapiens]
Length = 523
Score = 47.4 bits (111), Expect = 3e-05
Identities = 61/236 (25%), Positives = 97/236 (41%), Gaps = 36/236 (15%)
Query: 174 EPGSSASSDTEEDSLPANKCKKEIMVGPQFQADLSNLHLNRHCEKIYENED---QLLWDP 230
+P S S EE S + I VG +QA + Y N++ L+W P
Sbjct: 28 QPHSEDDSSEEEHSHDSM-----IRVGTNYQAVIPECKPESPAR--YSNKELKGMLVWSP 80
Query: 231 S-VLPEREVEEFLYRAVKRRWHEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLR 289
+ + + ++++++ A ++ + + EQAL L+ +VE++L L
Sbjct: 81 NHCVSDAKLDKYIAMAKEKHGYNI--------------EQALGMLLWHKHDVEKSLADLA 126
Query: 290 FNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKK--S 347
N D W+ E+ FE F HGK F IQ + + + V+YYY WKK S
Sbjct: 127 -NFTPFPD---EWTVEDKVLFEQAFGFHGKCFQRIQ-QMLPDKLIPSLVKYYYSWKKTRS 181
Query: 348 ERYDYFAQQTRLGRRKYVPSGTTDADQDLDGSDPDGPGRPRPEQDTLTGMRTDPLS 403
Q RLG RK D+D+ +G G P P + + PL+
Sbjct: 182 RTSVMDRQARRLGGRK----DKEDSDELEEGRGGVSEGEPDPADPKREPLPSRPLN 233
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,392,651
Number of Sequences: 37866
Number of extensions: 1402271
Number of successful extensions: 5344
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 256
Number of HSP's that attempted gapping in prelim test: 4921
Number of HSP's gapped (non-prelim): 614
length of query: 545
length of database: 18,247,518
effective HSP length: 107
effective length of query: 438
effective length of database: 14,195,856
effective search space: 6217784928
effective search space used: 6217784928
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.