Guide to the Human Genome
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Name: PHLDA2 Sequence: fasta or formatted (152aa) NCBI GI: 4507705
Description:

pleckstrin homology-like domain family A member 2

Referenced in:

Growth Hormone and Related Hormones

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.5         19           6
 C cysteine            2.0          3           1
 D aspartate           5.9          9           1
 E glutamate           7.9         12           1
 F phenylalanine       4.6          7           1
 G glycine             2.6          4           1
 H histidine           1.3          2           1
 I isoleucine          3.3          5           1
 K lysine              6.6         10           3
 L leucine             7.9         12           1
 M methionine          0.7          1           1
 N asparagine          1.3          2           1
 P proline             9.2         14           1
 Q glutamine           3.3          5           1
 R arginine           10.5         16           2
 S serine              8.6         13           1
 T threonine           4.6          7           2
 V valine              4.6          7           1
 W tryptophan          1.3          2           1
 Y tyrosine            1.3          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology-like domain family A member 2 [Ho... 
PHLDA3                0.304   pleckstrin homology-like domain, family A, member 3 [...
PHLDA1                0.293   pleckstrin homology-like domain, family A, member 1 ...
NOBOX                 0.046   NOBOX oogenesis homeobox 
FOXK1                 0.035   forkhead box K1 
TBC1D10B              0.028   TBC1 domain family, member 10B 
ZNF628                0.028   zinc finger protein 628 
MEX3A                 0.028   MEX3A protein 
LOC100292723          0.028   PREDICTED: hypothetical protein 
LOC100290128          0.028   PREDICTED: hypothetical protein XP_002346712 
LOC100288963          0.028   PREDICTED: hypothetical protein XP_002342546 
DOK2                  0.028   docking protein 2 
WNK2                  0.028   WNK lysine deficient protein kinase 2 
LMOD1                 0.028   leiomodin 1 (smooth muscle) 
CUX1                  0.025   cut-like homeobox 1 isoform a 
ZFPM1                 0.025   zinc finger protein, multitype 1 
DEDD2                 0.025   death effector domain-containing  DNA binding protei...
STK39                 0.025   serine threonine kinase 39 (STE20/SPS1 homolog, yea...
WIPF1                 0.025   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.025   WAS/WASL interacting protein family, member 1 
MAP3K10               0.025   mitogen-activated protein kinase kinase kinase 10 [H...
MAPK7                 0.025   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.025   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.025   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.025   mitogen-activated protein kinase 7 isoform 2 
PRG4                  0.021   proteoglycan 4 isoform D 
PRG4                  0.021   proteoglycan 4 isoform C 
PRG4                  0.021   proteoglycan 4 isoform B 
PRG4                  0.021   proteoglycan 4 isoform A 
TBKBP1                0.021   TBK1 binding protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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