Guide to the Human Genome
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Name: PHLDA3 Sequence: fasta or formatted (127aa) NCBI GI: 6912590
Description:

pleckstrin homology-like domain, family A, member 3

Referenced in:

Growth Hormone and Related Hormones

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         10           3
 C cysteine            2.4          3           1
 D aspartate           1.6          2           1
 E glutamate           7.9         10           1
 F phenylalanine       3.9          5           1
 G glycine            11.8         15           3
 H histidine           0.8          1           1
 I isoleucine          3.9          5           1
 K lysine              7.1          9           1
 L leucine            11.8         15           2
 M methionine          0.8          1           1
 N asparagine          1.6          2           1
 P proline             2.4          3           1
 Q glutamine           5.5          7           2
 R arginine            7.9         10           1
 S serine              3.9          5           1
 T threonine           9.4         12           1
 V valine              7.1          9           1
 W tryptophan          1.6          2           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology-like domain, family A, member 3 [... 
PHLDA1                0.380   pleckstrin homology-like domain, family A, member 1 ...
PHLDA2                0.376   pleckstrin homology-like domain family A member 2 [Ho...
AGAP6                 0.026   centaurin, gamma-like family, member 3 
AGAP5                 0.026   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP9                 0.026   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.026   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP4                 0.026   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP11                0.026   ankyrin repeat and GTPase domain Arf GTPase activat...
AGAP8                 0.026   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP7                 0.026   ArfGAP with GTPase domain, ankyrin repeat and PH do...
CYTH2                 0.022   cytohesin 2 isoform 1 
CYTH1                 0.022   cytohesin 1 isoform 1 
PLEKHO2               0.022   pleckstrin homology domain containing, family O memb...
LOC100293478          0.017   PREDICTED: similar to pleckstrin homology domain co...
AGAP3                 0.013   centaurin, gamma 3 isoform a 
ASAP2                 0.013   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.013   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
PLEKHM1               0.013   pleckstrin homology domain containing, family M (wit...
MYO10                 0.013   myosin X 
ASAP1                 0.013   development and differentiation enhancing factor 1 [...
LOC100291232          0.009   PREDICTED: hypothetical protein XP_002347841 
ZXDC                  0.009   ZXD family zinc finger C isoform 2 
ZXDC                  0.009   ZXD family zinc finger C isoform 1 
PRKCG                 0.009   protein kinase C, gamma 
LTK                   0.009   leukocyte receptor tyrosine kinase isoform 3 precur...
LTK                   0.009   leukocyte receptor tyrosine kinase isoform 1 precurs...
LTK                   0.009   leukocyte receptor tyrosine kinase isoform 2 precurs...
ZC3HC1                0.009   zinc finger, C3HC type 1 
AGAP1                 0.009   centaurin, gamma 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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