Guide to the Human Genome
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Name: STK39 Sequence: fasta or formatted (545aa) NCBI GI: 115430252
Description:

serine threonine kinase 39 (STE20/SPS1 homolog, yeast)

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         63           6
 C cysteine            1.7          9           1
 D aspartate           5.7         31           2
 E glutamate           7.5         41           2
 F phenylalanine       2.8         15           2
 G glycine             6.2         34           2
 H histidine           1.8         10           1
 I isoleucine          4.8         26           2
 K lysine              7.3         40           2
 L leucine             8.8         48           2
 M methionine          2.4         13           2
 N asparagine          2.9         16           1
 P proline             6.1         33           2
 Q glutamine           4.4         24           2
 R arginine            4.6         25           2
 S serine              6.4         35           2
 T threonine           4.6         25           1
 V valine              7.3         40           2
 W tryptophan          1.1          6           1
 Y tyrosine            2.0         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine threonine kinase 39 (STE20/SPS1 homolog, yea... 
OXSR1                 0.696   oxidative-stress responsive 1 
STK24                 0.201   serine/threonine kinase 24 isoform b 
STK24                 0.201   serine/threonine kinase 24 isoform a 
STK25                 0.198   serine/threonine kinase 25 
MST4                  0.192   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK4                  0.167   serine/threonine kinase 4 
STK3                  0.163   serine/threonine kinase 3 
MST4                  0.158   serine/threonine protein kinase MST4 isoform 2 [Hom...
MYO3A                 0.155   myosin IIIA 
PAK1                  0.152   p21-activated kinase 1 isoform 2 
PAK3                  0.151   p21-activated kinase 3 isoform d 
PAK3                  0.151   p21-activated kinase 3 isoform c 
PAK3                  0.151   p21-activated kinase 3 isoform b 
PAK3                  0.151   p21-activated kinase 3 isoform a 
PAK3                  0.151   p21-activated kinase 3 isoform a 
PAK3                  0.151   p21-activated kinase 3 isoform a 
MAP4K3                0.150   mitogen-activated protein kinase kinase kinase kinas...
PAK4                  0.149   p21-activated kinase 4 isoform 1 
PAK4                  0.149   p21-activated kinase 4 isoform 2 
PAK4                  0.149   p21-activated kinase 4 isoform 2 
PAK4                  0.149   p21-activated kinase 4 isoform 1 
PAK4                  0.149   p21-activated kinase 4 isoform 1 
PAK2                  0.149   p21-activated kinase 2 
PAK1                  0.149   p21-activated kinase 1 isoform 1 
TNIK                  0.148   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.148   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.148   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.148   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.148   TRAF2 and NCK interacting kinase isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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