Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4507357
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507357 transgelin 2 [Homo sapiens]
(199 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507357 transgelin 2 [Homo sapiens] 409 e-115
gi|56549135 transgelin 3 [Homo sapiens] 301 3e-82
gi|56549139 transgelin 3 [Homo sapiens] 301 3e-82
gi|56549137 transgelin 3 [Homo sapiens] 301 3e-82
gi|48255907 transgelin [Homo sapiens] 273 5e-74
gi|48255905 transgelin [Homo sapiens] 273 5e-74
gi|21361120 calponin 1, basic, smooth muscle [Homo sapiens] 148 3e-36
gi|4502923 calponin 3 [Homo sapiens] 146 1e-35
gi|4758018 calponin 2 isoform a [Homo sapiens] 135 2e-32
gi|41327730 calponin 2 isoform b [Homo sapiens] 114 5e-26
gi|33598968 LIM domain only 7 isoform 1 [Homo sapiens] 44 9e-05
gi|163310745 LIM and calponin homology domains 1 isoform c [Homo... 44 1e-04
gi|163310743 LIM and calponin homology domains 1 isoform b [Homo... 44 1e-04
gi|163310741 LIM and calponin homology domains 1 isoform a [Homo... 44 1e-04
gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens] 42 4e-04
gi|39753961 IQ motif containing GTPase activating protein 3 [Hom... 39 0.004
gi|120432044 vav 3 guanine nucleotide exchange factor isoform 1 ... 38 0.006
gi|197304715 vav 2 guanine nucleotide exchange factor isoform 1 ... 38 0.006
gi|40549448 vav 2 guanine nucleotide exchange factor isoform 2 [... 38 0.006
gi|33859670 leucine-rich repeats and calponin homology (CH) doma... 37 0.008
gi|21281675 growth arrest-specific 2 like 2 [Homo sapiens] 35 0.032
gi|22027525 Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo... 34 0.072
gi|169234649 smoothelin-like 2 isoform 2 [Homo sapiens] 34 0.094
gi|169234647 smoothelin-like 2 isoform 1 [Homo sapiens] 34 0.094
gi|4506787 IQ motif containing GTPase activating protein 1 [Homo... 33 0.21
gi|167614506 L-plastin [Homo sapiens] 32 0.27
gi|22027528 PAK-interacting exchange factor beta isoform b [Homo... 32 0.47
gi|19913394 smoothelin isoform c [Homo sapiens] 31 0.79
gi|117414148 hypothetical protein LOC221322 [Homo sapiens] 30 1.0
gi|19913396 smoothelin isoform b [Homo sapiens] 30 1.4
>gi|4507357 transgelin 2 [Homo sapiens]
Length = 199
Score = 409 bits (1052), Expect = e-115
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGT 60
MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGT
Sbjct: 1 MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGT 60
Query: 61 VLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGK 120
VLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGK
Sbjct: 61 VLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGK 120
Query: 121 NMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGT 180
NMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGT
Sbjct: 121 NMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGT 180
Query: 181 NRGASQAGMTGYGMPRQIL 199
NRGASQAGMTGYGMPRQIL
Sbjct: 181 NRGASQAGMTGYGMPRQIL 199
>gi|56549135 transgelin 3 [Homo sapiens]
Length = 199
Score = 301 bits (770), Expect = 3e-82
Identities = 139/199 (69%), Positives = 169/199 (84%)
Query: 1 MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGT 60
MANRGP+YGLSREVQ+KIE++YDADLE L+ WI QC +D+ P PGR +FQ WL DGT
Sbjct: 1 MANRGPSYGLSREVQEKIEQKYDADLENKLVDWIILQCAEDIEHPPPGRAHFQKWLMDGT 60
Query: 61 VLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGK 120
VLC+LIN+LYP GQ P+ KI S MAFKQMEQISQFL+AAE YG+ TTDIFQTVDLWEGK
Sbjct: 61 VLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVRTTDIFQTVDLWEGK 120
Query: 121 NMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGT 180
+MA VQRTLM LG +AV +DDG + G+P+WF +K+++N R FS+ QL++G+NVIGLQMG+
Sbjct: 121 DMAAVQRTLMALGSVAVTKDDGCYRGEPSWFHRKAQQNRRGFSEEQLRQGQNVIGLQMGS 180
Query: 181 NRGASQAGMTGYGMPRQIL 199
N+GASQAGMTGYGMPRQI+
Sbjct: 181 NKGASQAGMTGYGMPRQIM 199
>gi|56549139 transgelin 3 [Homo sapiens]
Length = 199
Score = 301 bits (770), Expect = 3e-82
Identities = 139/199 (69%), Positives = 169/199 (84%)
Query: 1 MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGT 60
MANRGP+YGLSREVQ+KIE++YDADLE L+ WI QC +D+ P PGR +FQ WL DGT
Sbjct: 1 MANRGPSYGLSREVQEKIEQKYDADLENKLVDWIILQCAEDIEHPPPGRAHFQKWLMDGT 60
Query: 61 VLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGK 120
VLC+LIN+LYP GQ P+ KI S MAFKQMEQISQFL+AAE YG+ TTDIFQTVDLWEGK
Sbjct: 61 VLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVRTTDIFQTVDLWEGK 120
Query: 121 NMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGT 180
+MA VQRTLM LG +AV +DDG + G+P+WF +K+++N R FS+ QL++G+NVIGLQMG+
Sbjct: 121 DMAAVQRTLMALGSVAVTKDDGCYRGEPSWFHRKAQQNRRGFSEEQLRQGQNVIGLQMGS 180
Query: 181 NRGASQAGMTGYGMPRQIL 199
N+GASQAGMTGYGMPRQI+
Sbjct: 181 NKGASQAGMTGYGMPRQIM 199
>gi|56549137 transgelin 3 [Homo sapiens]
Length = 199
Score = 301 bits (770), Expect = 3e-82
Identities = 139/199 (69%), Positives = 169/199 (84%)
Query: 1 MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGT 60
MANRGP+YGLSREVQ+KIE++YDADLE L+ WI QC +D+ P PGR +FQ WL DGT
Sbjct: 1 MANRGPSYGLSREVQEKIEQKYDADLENKLVDWIILQCAEDIEHPPPGRAHFQKWLMDGT 60
Query: 61 VLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGK 120
VLC+LIN+LYP GQ P+ KI S MAFKQMEQISQFL+AAE YG+ TTDIFQTVDLWEGK
Sbjct: 61 VLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVRTTDIFQTVDLWEGK 120
Query: 121 NMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGT 180
+MA VQRTLM LG +AV +DDG + G+P+WF +K+++N R FS+ QL++G+NVIGLQMG+
Sbjct: 121 DMAAVQRTLMALGSVAVTKDDGCYRGEPSWFHRKAQQNRRGFSEEQLRQGQNVIGLQMGS 180
Query: 181 NRGASQAGMTGYGMPRQIL 199
N+GASQAGMTGYGMPRQI+
Sbjct: 181 NKGASQAGMTGYGMPRQIM 199
>gi|48255907 transgelin [Homo sapiens]
Length = 201
Score = 273 bits (699), Expect = 5e-74
Identities = 130/200 (65%), Positives = 165/200 (82%), Gaps = 1/200 (0%)
Query: 1 MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGT 60
MAN+GP+YG+SREVQ KIEK+YD +LE+ L++WI QC DVGRP GR FQ WLK+G
Sbjct: 1 MANKGPSYGMSREVQSKIEKKYDEELEERLVEWIIVQCGPDVGRPDRGRLGFQVWLKNGV 60
Query: 61 VLCELINALYPEGQAPVKKIQ-ASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEG 119
+L +L+N+LYP+G PVK + +M FKQMEQ++QFL+AAE YG+ TD+FQTVDL+EG
Sbjct: 61 ILSKLVNSLYPDGSKPVKVPENPPSMVFKQMEQVAQFLKAAEDYGVIKTDMFQTVDLFEG 120
Query: 120 KNMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMG 179
K+MA VQRTLM LG LAV ++DG + GDPNWF KK++E+ R F+++QLQEGK+VIGLQMG
Sbjct: 121 KDMAAVQRTLMALGSLAVTKNDGHYRGDPNWFMKKAQEHKREFTESQLQEGKHVIGLQMG 180
Query: 180 TNRGASQAGMTGYGMPRQIL 199
+NRGASQAGMTGYG PRQI+
Sbjct: 181 SNRGASQAGMTGYGRPRQII 200
>gi|48255905 transgelin [Homo sapiens]
Length = 201
Score = 273 bits (699), Expect = 5e-74
Identities = 130/200 (65%), Positives = 165/200 (82%), Gaps = 1/200 (0%)
Query: 1 MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGT 60
MAN+GP+YG+SREVQ KIEK+YD +LE+ L++WI QC DVGRP GR FQ WLK+G
Sbjct: 1 MANKGPSYGMSREVQSKIEKKYDEELEERLVEWIIVQCGPDVGRPDRGRLGFQVWLKNGV 60
Query: 61 VLCELINALYPEGQAPVKKIQ-ASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEG 119
+L +L+N+LYP+G PVK + +M FKQMEQ++QFL+AAE YG+ TD+FQTVDL+EG
Sbjct: 61 ILSKLVNSLYPDGSKPVKVPENPPSMVFKQMEQVAQFLKAAEDYGVIKTDMFQTVDLFEG 120
Query: 120 KNMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMG 179
K+MA VQRTLM LG LAV ++DG + GDPNWF KK++E+ R F+++QLQEGK+VIGLQMG
Sbjct: 121 KDMAAVQRTLMALGSLAVTKNDGHYRGDPNWFMKKAQEHKREFTESQLQEGKHVIGLQMG 180
Query: 180 TNRGASQAGMTGYGMPRQIL 199
+NRGASQAGMTGYG PRQI+
Sbjct: 181 SNRGASQAGMTGYGRPRQII 200
>gi|21361120 calponin 1, basic, smooth muscle [Homo sapiens]
Length = 297
Score = 148 bits (374), Expect = 3e-36
Identities = 84/196 (42%), Positives = 115/196 (58%), Gaps = 14/196 (7%)
Query: 3 NRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVL 62
NRGPAYGLS EV+ K+ ++YD EQ L +WI + +G NF + LKDG +L
Sbjct: 7 NRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGN------NFMDGLKDGIIL 60
Query: 63 CELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNM 122
CE IN L P VKKI ST + Q+E I F++A +YG+ DIF+ DL+E N
Sbjct: 61 CEFINKLQP---GSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNH 117
Query: 123 ACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGTNR 182
VQ TL+ L +A + + + G K +++ R F +L+EG+N+IGLQMGTN+
Sbjct: 118 TQVQSTLLALASMAKTKGNKVNVG-----VKYAEKQERKFEPGKLREGRNIIGLQMGTNK 172
Query: 183 GASQAGMTGYGMPRQI 198
ASQ GMT YG R +
Sbjct: 173 FASQQGMTAYGTRRHL 188
>gi|4502923 calponin 3 [Homo sapiens]
Length = 329
Score = 146 bits (369), Expect = 1e-35
Identities = 85/196 (43%), Positives = 116/196 (59%), Gaps = 12/196 (6%)
Query: 3 NRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVL 62
N+GP+YGLS EV+ KI +YD E+ L WI +G NFQ LKDG +L
Sbjct: 5 NKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEEVTGMSIG------PNFQLGLKDGIIL 58
Query: 63 CELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNM 122
CELIN L P VKK+ S++ + Q+E I F++A + YG+ DIF+ DL+E NM
Sbjct: 59 CELINKLQP---GSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNM 115
Query: 123 ACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGTNR 182
VQ TL+ L GLA + F + K +++ R F + +L+ G++VIGLQMGTN+
Sbjct: 116 TQVQTTLVALAGLAKTKG---FHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNK 172
Query: 183 GASQAGMTGYGMPRQI 198
ASQAGMT YG R +
Sbjct: 173 CASQAGMTAYGTRRHL 188
>gi|4758018 calponin 2 isoform a [Homo sapiens]
Length = 309
Score = 135 bits (341), Expect = 2e-32
Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 12/196 (6%)
Query: 3 NRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVL 62
N+GP+YGLS EV+ ++ +YD E L WI +G +FQ LKDGT+L
Sbjct: 7 NKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIG------PDFQKGLKDGTIL 60
Query: 63 CELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNM 122
C L+N L P V KI S + Q+E +S F++A YG+N D+F+ DL+E NM
Sbjct: 61 CTLMNKLQP---GSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNM 117
Query: 123 ACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGTNR 182
VQ +L+ L G A + GL SG + K S++ RNF D ++ G+ VIGLQMGTN+
Sbjct: 118 TQVQVSLLALAGKAKTK--GLQSG-VDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNK 174
Query: 183 GASQAGMTGYGMPRQI 198
ASQ+GMT YG R +
Sbjct: 175 CASQSGMTAYGTRRHL 190
>gi|41327730 calponin 2 isoform b [Homo sapiens]
Length = 270
Score = 114 bits (285), Expect = 5e-26
Identities = 73/196 (37%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 3 NRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVL 62
N+GP+YGLS EV+ ++ +YD E L WI +G +FQ LKDGT+L
Sbjct: 7 NKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIG------PDFQKGLKDGTIL 60
Query: 63 CELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNM 122
C L+N L P V KI S + Q+E +S F++A YG+N D+F+ DL+E NM
Sbjct: 61 CTLMNKLQP---GSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNM 117
Query: 123 ACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGTNR 182
VQ +L+ L G SG + ++ +P+N + + I LQMGTN+
Sbjct: 118 TQVQVSLLALAGKMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMDH--STISLQMGTNK 175
Query: 183 GASQAGMTGYGMPRQI 198
ASQ GMT G R I
Sbjct: 176 CASQVGMTAPGTRRHI 191
>gi|33598968 LIM domain only 7 isoform 1 [Homo sapiens]
Length = 1349
Score = 43.9 bits (102), Expect = 9e-05
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 50 ENFQNWLKDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTD 109
++F+ L++G +LC+LIN L P +KKI + ++ I+ FL+A E+ G+
Sbjct: 85 KDFRASLENGVLLCDLINKLKP---GVIKKINRLSTPIAGLDNINVFLKACEQIGLKEAQ 141
Query: 110 IFQTVDLWEGKNMACVQR 127
+F DL + N V++
Sbjct: 142 LFHPGDLQDLSNRVTVKQ 159
>gi|163310745 LIM and calponin homology domains 1 isoform c [Homo
sapiens]
Length = 1056
Score = 43.5 bits (101), Expect = 1e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 48 GRENFQNWLKDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINT 107
G ++F+ L++G +LCEL+NA+ P VKKI ++ I FL+ + G+
Sbjct: 40 GDKDFRTGLENGILLCELLNAIKP---GLVKKINRLPTPIAGLDNIILFLRGCKELGLKE 96
Query: 108 TDIFQTVDLWEGKNMACVQ 126
+ +F DL + N V+
Sbjct: 97 SQLFDPSDLQDTSNRVTVK 115
>gi|163310743 LIM and calponin homology domains 1 isoform b [Homo
sapiens]
Length = 1057
Score = 43.5 bits (101), Expect = 1e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 48 GRENFQNWLKDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINT 107
G ++F+ L++G +LCEL+NA+ P VKKI ++ I FL+ + G+
Sbjct: 40 GDKDFRTGLENGILLCELLNAIKP---GLVKKINRLPTPIAGLDNIILFLRGCKELGLKE 96
Query: 108 TDIFQTVDLWEGKNMACVQ 126
+ +F DL + N V+
Sbjct: 97 SQLFDPSDLQDTSNRVTVK 115
>gi|163310741 LIM and calponin homology domains 1 isoform a [Homo
sapiens]
Length = 1083
Score = 43.5 bits (101), Expect = 1e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 48 GRENFQNWLKDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINT 107
G ++F+ L++G +LCEL+NA+ P VKKI ++ I FL+ + G+
Sbjct: 40 GDKDFRTGLENGILLCELLNAIKP---GLVKKINRLPTPIAGLDNIILFLRGCKELGLKE 96
Query: 108 TDIFQTVDLWEGKNMACVQ 126
+ +F DL + N V+
Sbjct: 97 SQLFDPSDLQDTSNRVTVK 115
>gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens]
Length = 845
Score = 41.6 bits (96), Expect = 4e-04
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 56 LKDGTVLCELINALYPEG-QAPVKKIQASTMAFKQMEQISQFLQAA-ERYGINTTDIFQT 113
L+DG +LC+L+N L P ++ F ++ I FL E++G+ +++F+
Sbjct: 37 LRDGVLLCQLLNNLLPHAINLREVNLRPQMSQFLCLKNIRTFLSTCCEKFGLKRSELFEA 96
Query: 114 VDLWEGKNMACVQRTLMNLGGLAVARDDGL 143
DL++ ++ V TL L +A++ G+
Sbjct: 97 FDLFDVQDFGKVIYTLSALSWTPIAQNRGI 126
>gi|39753961 IQ motif containing GTPase activating protein 3 [Homo
sapiens]
Length = 1631
Score = 38.5 bits (88), Expect = 0.004
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 10 LSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINAL 69
+ + +Q + QY LE+ +W+ ++++ P E+ +N G +L +L +
Sbjct: 21 MDEQRRQNVAYQYLCRLEEAK-RWMEACLKEELPSPVELEESLRN----GVLLAKLGHCF 75
Query: 70 YPEGQAPVKKI--------QASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKN 121
P P+KKI QA+ + F+ + I+ +L A G+ +T +T D+++ KN
Sbjct: 76 APS-VVPLKKIYDVEQLRYQATGLHFRHTDNINFWLSAIAHIGLPSTFFPETTDIYDKKN 134
Query: 122 M 122
M
Sbjct: 135 M 135
>gi|120432044 vav 3 guanine nucleotide exchange factor isoform 1
[Homo sapiens]
Length = 847
Score = 37.7 bits (86), Expect = 0.006
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 56 LKDGTVLCELINALYPEG-QAPVKKIQASTMAFKQMEQISQFLQA-AERYGINTTDIFQT 113
L+DG +LC+L+N L ++ F ++ I FL A E +G+ +++F+
Sbjct: 37 LRDGVLLCQLLNNLRAHSINLKEINLRPQMSQFLCLKNIRTFLTACCETFGMRKSELFEA 96
Query: 114 VDLWEGKNMACVQRTLMNLGGLAVARDDGL 143
DL++ ++ V TL L +A G+
Sbjct: 97 FDLFDVRDFGKVIETLSRLSRTPIALATGI 126
>gi|197304715 vav 2 guanine nucleotide exchange factor isoform 1
[Homo sapiens]
Length = 878
Score = 37.7 bits (86), Expect = 0.006
Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 56 LKDGTVLCELINALYPEGQAPVKKI--QASTMAFKQMEQISQFLQAA-ERYGINTTDIFQ 112
L+DG +LC+L++ L P G +K I + F ++ I FL+ +++G+ +++F
Sbjct: 37 LRDGVLLCQLLHNLSP-GSIDLKDINFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFD 95
Query: 113 TVDLWEGKNMACVQRTLMNLGGLAVARDDGL 143
DL++ ++ V + L ++A++ G+
Sbjct: 96 PFDLFDVRDFGKVISAVSRLSLHSIAQNKGI 126
>gi|40549448 vav 2 guanine nucleotide exchange factor isoform 2
[Homo sapiens]
Length = 839
Score = 37.7 bits (86), Expect = 0.006
Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 56 LKDGTVLCELINALYPEGQAPVKKI--QASTMAFKQMEQISQFLQAA-ERYGINTTDIFQ 112
L+DG +LC+L++ L P G +K I + F ++ I FL+ +++G+ +++F
Sbjct: 37 LRDGVLLCQLLHNLSP-GSIDLKDINFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFD 95
Query: 113 TVDLWEGKNMACVQRTLMNLGGLAVARDDGL 143
DL++ ++ V + L ++A++ G+
Sbjct: 96 PFDLFDVRDFGKVISAVSRLSLHSIAQNKGI 126
>gi|33859670 leucine-rich repeats and calponin homology (CH) domain
containing 1 [Homo sapiens]
Length = 728
Score = 37.4 bits (85), Expect = 0.008
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 18/149 (12%)
Query: 6 PAYGLSREVQQ-KIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCE 64
P + + R+++Q + EK+ L + + + +D+G L DG VLC
Sbjct: 565 PQFTIRRKMEQMREEKELVEQLRESIEMRLKVSLHEDLGAA----------LMDGVVLCH 614
Query: 65 LINALYPEGQA----PVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDL--WE 118
L+N + P A P + +MA K + FL+A + G+ D+ D+ +
Sbjct: 615 LVNHIRPRSVASIHVPSPAVPKLSMA-KCRRNVENFLEACRKLGVPEADLCSPCDILQLD 673
Query: 119 GKNMACVQRTLMNLGGLAVARDDGLFSGD 147
+++ TL+ LG A L S D
Sbjct: 674 FRHIRKTVDTLLALGEKAPPPTSALRSRD 702
>gi|21281675 growth arrest-specific 2 like 2 [Homo sapiens]
Length = 880
Score = 35.4 bits (80), Expect = 0.032
Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 17 KIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELIN-------AL 69
K +QY +++ L +W+ D+ NF L+ G VLC+ N A
Sbjct: 25 KSSEQYLEAMKEDLAEWLRDLYGLDIDAA-----NFLQVLETGLVLCQHANVVTDAALAF 79
Query: 70 YPEGQAPVKKIQ-----------ASTMAFKQMEQISQFLQ-AAERYGINTTDIFQTVDLW 117
E A +KI A F+ + +S F+Q + GI +F+T DL
Sbjct: 80 LAEAPAQAQKIPMPRVGVSCNGAAQPGTFQARDNVSNFIQWCRKEMGIQEVLMFETEDLV 139
Query: 118 EGKNMACVQRTLMNLG 133
KN+ V L+ LG
Sbjct: 140 LRKNVKNVVLCLLELG 155
>gi|22027525 Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo
sapiens]
Length = 776
Score = 34.3 bits (77), Expect = 0.072
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 27 EQILIQWITT-----QCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVKKIQ 81
E+ ++ W+ + +K + P+ E ++ LK+G VLC+LIN L P G +
Sbjct: 4 EEQIVTWLISLGVLESPKKTICDPE---EFLKSSLKNGVVLCKLINRLMP-GSVEKFCLD 59
Query: 82 ASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNMACVQRTLM 130
T A + I+ FL+ + +IF DL+ G N + V TL+
Sbjct: 60 PQTEA-DCINNINDFLKGCATLQV---EIFDPDDLYSGVNFSKVLSTLL 104
>gi|169234649 smoothelin-like 2 isoform 2 [Homo sapiens]
Length = 317
Score = 33.9 bits (76), Expect = 0.094
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 24 ADLEQILIQWITTQCR-KDVGRPQPGRENFQNWLKDGTVLCELINALYPE-----GQAPV 77
+ ++QIL++W CR K +G +NF + DG C L+++ +P+ +P
Sbjct: 207 SSIKQILLEW----CRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPT 262
Query: 78 KKIQASTMAFKQMEQIS 94
++ + +AF E ++
Sbjct: 263 QRQKNFELAFTMAENLA 279
>gi|169234647 smoothelin-like 2 isoform 1 [Homo sapiens]
Length = 461
Score = 33.9 bits (76), Expect = 0.094
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 24 ADLEQILIQWITTQCR-KDVGRPQPGRENFQNWLKDGTVLCELINALYPE-----GQAPV 77
+ ++QIL++W CR K +G +NF + DG C L+++ +P+ +P
Sbjct: 351 SSIKQILLEW----CRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPT 406
Query: 78 KKIQASTMAFKQMEQIS 94
++ + +AF E ++
Sbjct: 407 QRQKNFELAFTMAENLA 423
>gi|4506787 IQ motif containing GTPase activating protein 1 [Homo
sapiens]
Length = 1657
Score = 32.7 bits (73), Expect = 0.21
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 15 QQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPEGQ 74
+Q + +Y LE+ +W+ +D+ P + L++G L +L N P+
Sbjct: 36 RQNVAYEYLCHLEEAK-RWMEACLGEDL----PPTTELEEGLRNGVYLAKLGNFFSPK-V 89
Query: 75 APVKKI--------QASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNM 122
+KKI +A+ + F+ + + Q+L A + G+ +T D+++ KNM
Sbjct: 90 VSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMDEIGLPKIFYPETTDIYDRKNM 145
>gi|167614506 L-plastin [Homo sapiens]
Length = 627
Score = 32.3 bits (72), Expect = 0.27
Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 6/117 (5%)
Query: 9 GLSREVQQKIEKQYDADLEQILIQWITTQCRKD-----VGRPQPGRENFQNWLKDGTVLC 63
G S + + Y + + + WI D V P + N + DG VLC
Sbjct: 105 GTSEQSSVGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTNDLFNAVGDGIVLC 164
Query: 64 ELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGK 120
++IN P+ + F E ++ L +A G + +I DL EGK
Sbjct: 165 KMINLSVPDTIDERTINKKKLTPFTIQENLNLALNSASAIGCHVVNI-GAEDLKEGK 220
>gi|22027528 PAK-interacting exchange factor beta isoform b [Homo
sapiens]
Length = 782
Score = 31.6 bits (70), Expect = 0.47
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 56 LKDGTVLCELINALYPEGQAPVKKIQASTMAFKQ-MEQISQFLQAAERYGINTTDIFQTV 114
LKDG VLC L+ L P ++K+ + + + I +FL+ + F
Sbjct: 35 LKDGVVLCRLLERLLP---GTIEKVYPEPRSESECLSNIREFLRGCG--ASLRLETFDAN 89
Query: 115 DLWEGKNMACVQRTLMNLGGLAVARDDGLFS 145
DL++G+N V +L+ L V D GL S
Sbjct: 90 DLYQGQNFNKVLSSLVTLN--KVTADIGLGS 118
>gi|19913394 smoothelin isoform c [Homo sapiens]
Length = 917
Score = 30.8 bits (68), Expect = 0.79
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 26 LEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPE----GQ-APVKKI 80
++Q+L+ W + R G +NF + DG C L++ +PE GQ +P +
Sbjct: 801 IKQMLLDWCRAKTR---GYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRR 857
Query: 81 QASTMAFKQMEQI 93
Q +AF E +
Sbjct: 858 QNFEVAFSSAEML 870
>gi|117414148 hypothetical protein LOC221322 [Homo sapiens]
Length = 1257
Score = 30.4 bits (67), Expect = 1.0
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 23/113 (20%)
Query: 28 QILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINA---LYPEGQ-----APVKK 79
QI +QWIT QC F N+L D +C I L P+ Q A K
Sbjct: 1155 QICLQWIT-QC-------------FWNYL-DWIEICHYIATCVFLGPDYQVYICIAVFKH 1199
Query: 80 IQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNMACVQRTLMNL 132
+Q + Q + + FL+ +G +D F+ +++ E + R + N+
Sbjct: 1200 LQQDILQHTQTQDLQVFLKEEALHGFRVSDYFEYMEILEQNYRTVLLRDMRNI 1252
>gi|19913396 smoothelin isoform b [Homo sapiens]
Length = 915
Score = 30.0 bits (66), Expect = 1.4
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 26 LEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPE----GQ-APVKKI 80
++Q+L+ W + R G +NF + DG C L++ +PE GQ +P +
Sbjct: 801 IKQMLLDWCRAKTR---GYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRR 857
Query: 81 QASTMAFKQME 91
Q +AF E
Sbjct: 858 QNFEVAFSSAE 868
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,662,885
Number of Sequences: 37866
Number of extensions: 320227
Number of successful extensions: 771
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 722
Number of HSP's gapped (non-prelim): 56
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.