CNN1 12903

Name: CNN1	Sequence: fasta or formatted (297aa)		NCBI GI: 21361120
Description: calponin 1, basic, smooth muscle		Referenced in: Cytoskeleton Muscle
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 20 1 C cysteine 1.0 3 1 D aspartate 3.4 10 1 E glutamate 6.4 19 1 F phenylalanine 3.0 9 1 G glycine 10.1 30 1 H histidine 3.7 11 2 I isoleucine 4.7 14 2 K lysine 7.7 23 2 L leucine 7.7 23 2 M methionine 3.4 10 1 N asparagine 7.4 22 2 P proline 4.4 13 1 Q glutamine 6.7 20 2 R arginine 4.4 13 2 S serine 4.7 14 2 T threonine 6.1 18 1 V valine 3.7 11 1 W tryptophan 0.7 2 1 Y tyrosine 4.0 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calponin 1, basic, smooth muscle CNN3 0.662 calponin 3 CNN2 0.575 calponin 2 isoform a CNN2 0.478 calponin 2 isoform b TAGLN2 0.209 transgelin 2 TAGLN3 0.199 transgelin 3 TAGLN3 0.199 transgelin 3 TAGLN3 0.199 transgelin 3 TAGLN 0.194 transgelin TAGLN 0.194 transgelin LIMCH1 0.082 LIM and calponin homology domains 1 isoform c [Homo... LIMCH1 0.082 LIM and calponin homology domains 1 isoform b [Homo... LIMCH1 0.082 LIM and calponin homology domains 1 isoform a [Homo... LMO7 0.058 LIM domain only 7 isoform 1 ARHGEF6 0.049 Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo... VAV2 0.041 vav 2 guanine nucleotide exchange factor isoform 1 ... VAV2 0.041 vav 2 guanine nucleotide exchange factor isoform 2 [... ARHGEF7 0.037 PAK-interacting exchange factor beta isoform b [Homo... LRCH2 0.036 leucine-rich repeats and calponin homology (CH) dom... VAV1 0.034 vav 1 guanine nucleotide exchange factor LRCH4 0.032 leucine-rich repeats and calponin homology (CH) doma... VAV3 0.032 vav 3 guanine nucleotide exchange factor isoform 1 ... LRCH1 0.032 leucine-rich repeats and calponin homology (CH) doma... ARHGEF7 0.026 PAK-interacting exchange factor beta isoform c [Hom... GAS2L2 0.022 growth arrest-specific 2 like 2 GAS2L3 0.020 growth arrest-specific 2 like 3 ARHGEF7 0.019 PAK-interacting exchange factor beta isoform d [Hom... GAS2 0.014 growth arrest-specific 2 GAS2 0.014 growth arrest-specific 2 GAS2 0.014 growth arrest-specific 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.