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Search of human proteins with 4507171
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507171 secreted protein, acidic, cysteine-rich [Homo
sapiens]
(303 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507171 secreted protein, acidic, cysteine-rich [Homo sapiens] 645 0.0
gi|190194423 SPARC-like 1 [Homo sapiens] 324 5e-89
gi|190341024 SPARC-like 1 [Homo sapiens] 324 5e-89
gi|93141001 testican 3 isoform 2 [Homo sapiens] 59 5e-09
gi|93141003 testican 3 isoform 1 [Homo sapiens] 58 9e-09
gi|7662036 sparc/osteonectin, cwcv and kazal-like domains proteo... 55 8e-08
gi|5453652 follistatin isoform FST317 precursor [Homo sapiens] 52 8e-07
gi|7242222 follistatin isoform FST344 precursor [Homo sapiens] 52 8e-07
gi|4759164 sparc/osteonectin, cwcv and kazal-like domains proteo... 51 1e-06
gi|5031701 follistatin-like 3 glycoprotein precursor [Homo sapiens] 48 9e-06
gi|24308277 SPARC related modular calcium binding 2 [Homo sapiens] 47 2e-05
gi|78190498 secreted modular calcium-binding protein 1 isoform 1... 46 5e-05
gi|11545873 secreted modular calcium-binding protein 1 isoform 2... 46 5e-05
gi|54873613 agrin [Homo sapiens] 45 1e-04
gi|5901956 follistatin-like 1 precursor [Homo sapiens] 44 1e-04
gi|134244285 Notch homolog 3 [Homo sapiens] 39 0.004
gi|12383051 transmembrane protein with EGF-like and two follista... 38 0.013
gi|122937283 6720455I24Rik homolog [Homo sapiens] 36 0.048
gi|224451128 eyes shut homolog isoform 1 [Homo sapiens] 35 0.063
gi|148833508 notch1 preproprotein [Homo sapiens] 35 0.11
gi|4759146 slit homolog 2 [Homo sapiens] 35 0.11
gi|239751787 PREDICTED: hypothetical protein XP_002348012 [Homo ... 33 0.41
gi|154146262 Fc fragment of IgG binding protein [Homo sapiens] 33 0.41
gi|10190748 CEGP1 protein [Homo sapiens] 32 0.69
gi|51173735 ras responsive element binding protein 1 isoform 2 [... 32 0.69
gi|51173737 ras responsive element binding protein 1 isoform 1 [... 32 0.69
gi|33598931 scavenger receptor class F, member 1 isoform 3 precu... 32 0.91
gi|33598929 scavenger receptor class F, member 1 isoform 1 precu... 32 0.91
gi|29568105 transmembrane protein with EGF-like and two follista... 32 0.91
gi|167614506 L-plastin [Homo sapiens] 31 1.2
>gi|4507171 secreted protein, acidic, cysteine-rich [Homo sapiens]
Length = 303
Score = 645 bits (1664), Expect = 0.0
Identities = 303/303 (100%), Positives = 303/303 (100%)
Query: 1 MRAWIFFLLCLAGRALAAPQQEALPDETEVVEETVAEVTEVSVGANPVQVEVGEFDDGAE 60
MRAWIFFLLCLAGRALAAPQQEALPDETEVVEETVAEVTEVSVGANPVQVEVGEFDDGAE
Sbjct: 1 MRAWIFFLLCLAGRALAAPQQEALPDETEVVEETVAEVTEVSVGANPVQVEVGEFDDGAE 60
Query: 61 ETEEEVVAENPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFD 120
ETEEEVVAENPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFD
Sbjct: 61 ETEEEVVAENPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFD 120
Query: 121 SSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYE 180
SSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYE
Sbjct: 121 SSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYE 180
Query: 181 RDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQ 240
RDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQ
Sbjct: 181 RDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQ 240
Query: 241 HPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDIDKD 300
HPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDIDKD
Sbjct: 241 HPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDIDKD 300
Query: 301 LVI 303
LVI
Sbjct: 301 LVI 303
>gi|190194423 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 324 bits (831), Expect = 5e-89
Identities = 148/259 (57%), Positives = 190/259 (73%), Gaps = 6/259 (2%)
Query: 49 QVEVGEFDDGAEETEEE----VVAENPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAP 104
+ + E EET E V A + C + CK G +C+ D+ P CVCQDP +CP P
Sbjct: 406 EAKKAENSSNEEETSSEGNMRVHAVDSCMSFQCKRGHICKADQQGKPHCVCQDPVTCP-P 464
Query: 105 IGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFP 164
++VC DN+T+ SSCH FATKC LEGTKKGH+L LDY G CK IP C D E+ +FP
Sbjct: 465 TKPLDQVCGTDNQTYASSCHLFATKCRLEGTKKGHQLQLDYFGACKSIPTCTDFEVIQFP 524
Query: 165 LRMRDWLKNVLVTLYERDEDN-NLLTEKQKLRVKKIHENEKRLEAGDHPVELLARDFEKN 223
LRMRDWLKN+L+ LYE + ++ L EKQ+ +VKKI+ +EKRL AGDHP++LL RDF+KN
Sbjct: 525 LRMRDWLKNILMQLYEANSEHAGYLNEKQRNKVKKIYLDEKRLLAGDHPIDLLLRDFKKN 584
Query: 224 YNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIAL 283
Y+MY++PVHWQF +LDQHP+D L+H+ELAPLRA L+PMEHC TRFFE CD + DK+I L
Sbjct: 585 YHMYVYPVHWQFSELDQHPMDRVLTHSELAPLRASLVPMEHCITRFFEECDPNKDKHITL 644
Query: 284 DEWAGCFGIKQKDIDKDLV 302
EW CFGIK++DID++L+
Sbjct: 645 KEWGHCFGIKEEDIDENLL 663
Score = 30.8 bits (68), Expect = 1.5
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 1 MRAWIFFLLCLAGRALAAP-QQEALPDETEVVEETVAEVTEVSVGANPVQVEVGEFDDGA 59
M+ +FF LCL G A A P L D ++ ETVA P + A
Sbjct: 1 MKTGLFF-LCLLGTAAAIPTNARLLSDHSKPTAETVA----------PDNTAIPSLRAEA 49
Query: 60 EETEEEVVAENPCQNHH 76
EE E+E +HH
Sbjct: 50 EENEKETAVSTEDDSHH 66
>gi|190341024 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 324 bits (831), Expect = 5e-89
Identities = 148/259 (57%), Positives = 190/259 (73%), Gaps = 6/259 (2%)
Query: 49 QVEVGEFDDGAEETEEE----VVAENPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAP 104
+ + E EET E V A + C + CK G +C+ D+ P CVCQDP +CP P
Sbjct: 406 EAKKAENSSNEEETSSEGNMRVHAVDSCMSFQCKRGHICKADQQGKPHCVCQDPVTCP-P 464
Query: 105 IGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFP 164
++VC DN+T+ SSCH FATKC LEGTKKGH+L LDY G CK IP C D E+ +FP
Sbjct: 465 TKPLDQVCGTDNQTYASSCHLFATKCRLEGTKKGHQLQLDYFGACKSIPTCTDFEVIQFP 524
Query: 165 LRMRDWLKNVLVTLYERDEDN-NLLTEKQKLRVKKIHENEKRLEAGDHPVELLARDFEKN 223
LRMRDWLKN+L+ LYE + ++ L EKQ+ +VKKI+ +EKRL AGDHP++LL RDF+KN
Sbjct: 525 LRMRDWLKNILMQLYEANSEHAGYLNEKQRNKVKKIYLDEKRLLAGDHPIDLLLRDFKKN 584
Query: 224 YNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIAL 283
Y+MY++PVHWQF +LDQHP+D L+H+ELAPLRA L+PMEHC TRFFE CD + DK+I L
Sbjct: 585 YHMYVYPVHWQFSELDQHPMDRVLTHSELAPLRASLVPMEHCITRFFEECDPNKDKHITL 644
Query: 284 DEWAGCFGIKQKDIDKDLV 302
EW CFGIK++DID++L+
Sbjct: 645 KEWGHCFGIKEEDIDENLL 663
Score = 30.8 bits (68), Expect = 1.5
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 1 MRAWIFFLLCLAGRALAAP-QQEALPDETEVVEETVAEVTEVSVGANPVQVEVGEFDDGA 59
M+ +FF LCL G A A P L D ++ ETVA P + A
Sbjct: 1 MKTGLFF-LCLLGTAAAIPTNARLLSDHSKPTAETVA----------PDNTAIPSLRAEA 49
Query: 60 EETEEEVVAENPCQNHH 76
EE E+E +HH
Sbjct: 50 EENEKETAVSTEDDSHH 66
>gi|93141001 testican 3 isoform 2 [Homo sapiens]
Length = 436
Score = 58.9 bits (141), Expect = 5e-09
Identities = 67/297 (22%), Positives = 99/297 (33%), Gaps = 90/297 (30%)
Query: 51 EVGEFDDGAEETEEEVV---------------AENPCQNHHCKHGKVCELDENNTPMCVC 95
EVG+++ +E E++ A++PC C KVC ++ T +C+
Sbjct: 54 EVGQWNKFRDEVEDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCIS 113
Query: 96 QD---------------------PTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCTLEG 134
T P+ VC +D T+ C C L
Sbjct: 114 HRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVL-- 171
Query: 135 TKKGHKLHLDYIG--PCKYIPP----------CLDSELTEFPLRMRDWLKNVLVTLYERD 182
G ++ + G PC P C D E E R+RDW K L+E
Sbjct: 172 ---GKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFK----ALHESG 224
Query: 183 EDNNLLTEKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPV-----HWQFGQ 237
N + L R ++ I P+ W F +
Sbjct: 225 SQNK-------------------------KTKTLLRPERSRFDTSILPICKDSLGWMFNR 259
Query: 238 LDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQ 294
LD + D L +EL + L E CT FF +CD D I+ +EW CF +Q
Sbjct: 260 LDTN-YDLLLDQSELRSIY--LDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQ 313
>gi|93141003 testican 3 isoform 1 [Homo sapiens]
Length = 433
Score = 58.2 bits (139), Expect = 9e-09
Identities = 62/265 (23%), Positives = 88/265 (33%), Gaps = 75/265 (28%)
Query: 68 AENPCQNHHCKHGKVCELDENNTPMCVCQD---------------------PTSCPAPIG 106
A++PC C KVC ++ T +C+ T P+
Sbjct: 83 AKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVV 142
Query: 107 EFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIG--PCKYIPP---------- 154
VC +D T+ C C L G ++ + G PC P
Sbjct: 143 YPSPVCGSDGHTYSFQCKLEYQACVL-----GKQISVKCEGHCPCPSDKPTSTSRNVKRA 197
Query: 155 CLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPVE 214
C D E E R+RDW K L+E N +
Sbjct: 198 CSDLEFREVANRLRDWFK----ALHESGSQNK-------------------------KTK 228
Query: 215 LLARDFEKNYNMYIFPV-----HWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRF 269
L R ++ I P+ W F +LD + D L +EL + L E CT F
Sbjct: 229 TLLRPERSRFDTSILPICKDSLGWMFNRLDTN-YDLLLDQSELRSIY--LDKNEQCTKAF 285
Query: 270 FETCDLDNDKYIALDEWAGCFGIKQ 294
F +CD D I+ +EW CF +Q
Sbjct: 286 FNSCDTYKDSLISNNEWCYCFQRQQ 310
>gi|7662036 sparc/osteonectin, cwcv and kazal-like domains
proteoglycan (testican) 2 isoform 2 [Homo sapiens]
Length = 424
Score = 55.1 bits (131), Expect = 8e-08
Identities = 59/271 (21%), Positives = 88/271 (32%), Gaps = 66/271 (24%)
Query: 52 VGEFDDGAEETEEEVVAENPCQNHHCKHGKVCELDENNTPMCVCQ--------------- 96
+ ++D + E ++PCQ C KVC MC+ +
Sbjct: 70 IKSWEDNQQGDEALDTTKDPCQKVKCSRHKVCIAQGYQRAMCISRKKLEHRIKQPTVKLH 129
Query: 97 ---DPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIP 153
D P + + VC +D T+ S C C +L + GPC
Sbjct: 130 GNKDSICKPCHMAQLASVCGSDGHTYSSVCKLEQQACL-----SSKQLAVRCEGPCPCPT 184
Query: 154 P-------------CLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKIH 200
C +L + R+RDW + +H
Sbjct: 185 EQAATSTADGKPETCTGQDLADLGDRLRDWFQ-------------------------LLH 219
Query: 201 ENEKRLEAGDHPVELLARDFEKNYNMYIFP-VHWQFGQLDQHPIDGYLSHTELAPLRAPL 259
EN K+ V A +K+ + W F +LD D +L TELA + L
Sbjct: 220 ENSKQ-NGSASSVAGPASGLDKSLGASCKDSIGWMFSKLDTSA-DLFLDQTELAAIN--L 275
Query: 260 IPMEHCTTRFFETCDLDNDKYIALDEWAGCF 290
E C FF +CD D ++ EW CF
Sbjct: 276 DKYEVCIRPFFNSCDTYKDGRVSTAEWCFCF 306
>gi|5453652 follistatin isoform FST317 precursor [Homo sapiens]
Length = 317
Score = 51.6 bits (122), Expect = 8e-07
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Query: 61 ETEEEVVAENPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFD 120
E + + + C++ C C +D+ N CV + CP P + +C ND T+
Sbjct: 157 EVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPASSEQYLCGNDGVTYS 215
Query: 121 SSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELT 161
S+CH C L G + L Y G C C D + T
Sbjct: 216 SACHLRKATCLL-----GRSIGLAYEGKCIKAKSCEDIQCT 251
Score = 47.4 bits (111), Expect = 2e-05
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 66 VVAENPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHF 125
+ + C+N C GK C +++ N P CVC S G VC D KT+ + C
Sbjct: 89 IPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKG---PVCGLDGKTYRNECAL 145
Query: 126 FATKCTLEGTKKGHKLHLDYIGPCK 150
+C K+ +L + Y G CK
Sbjct: 146 LKARC-----KEQPELEVQYQGRCK 165
Score = 31.2 bits (69), Expect = 1.2
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 18/93 (19%)
Query: 63 EEEVVAENPCQNHHCKHGKVCELD----ENNTPMC--VCQDPTSCPAPIGEFEKVCSNDN 116
E + + C++ C GK C D +C +C D S E VC++DN
Sbjct: 236 EGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSD-------EPVCASDN 288
Query: 117 KTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPC 149
T+ S C C+ G L + + G C
Sbjct: 289 ATYASECAMKEAACS-----SGVLLEVKHSGSC 316
>gi|7242222 follistatin isoform FST344 precursor [Homo sapiens]
Length = 344
Score = 51.6 bits (122), Expect = 8e-07
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Query: 61 ETEEEVVAENPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFD 120
E + + + C++ C C +D+ N CV + CP P + +C ND T+
Sbjct: 157 EVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPASSEQYLCGNDGVTYS 215
Query: 121 SSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELT 161
S+CH C L G + L Y G C C D + T
Sbjct: 216 SACHLRKATCLL-----GRSIGLAYEGKCIKAKSCEDIQCT 251
Score = 47.4 bits (111), Expect = 2e-05
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 66 VVAENPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHF 125
+ + C+N C GK C +++ N P CVC S G VC D KT+ + C
Sbjct: 89 IPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKG---PVCGLDGKTYRNECAL 145
Query: 126 FATKCTLEGTKKGHKLHLDYIGPCK 150
+C K+ +L + Y G CK
Sbjct: 146 LKARC-----KEQPELEVQYQGRCK 165
Score = 32.3 bits (72), Expect = 0.53
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 18/103 (17%)
Query: 63 EEEVVAENPCQNHHCKHGKVCELD----ENNTPMC--VCQDPTSCPAPIGEFEKVCSNDN 116
E + + C++ C GK C D +C +C D S E VC++DN
Sbjct: 236 EGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSD-------EPVCASDN 288
Query: 117 KTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSE 159
T+ S C C+ G L + + G C I + E
Sbjct: 289 ATYASECAMKEAACS-----SGVLLEVKHSGSCNSISEDTEEE 326
>gi|4759164 sparc/osteonectin, cwcv and kazal-like domains
proteoglycan 1 precursor [Homo sapiens]
Length = 439
Score = 50.8 bits (120), Expect = 1e-06
Identities = 57/257 (22%), Positives = 88/257 (34%), Gaps = 67/257 (26%)
Query: 68 AENPCQNHHCKHGKVCELDENNTPMCVCQ------------------DPTSC----PAPI 105
+++PC C KVC + T +CV + P++ P P+
Sbjct: 82 SKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAQKHWVGPSNLVKCKPCPV 141
Query: 106 GEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIP------------ 153
+ VC +D ++ S C K G L GPC +P
Sbjct: 142 AQSAMVCGSDGHSYTSKC-----KLEFHACSTGKSLATLCDGPCPCLPEPEPPKHKAERS 196
Query: 154 PCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPV 213
C D EL R++DW + ED N RV K + D +
Sbjct: 197 ACTDKELRNLASRLKDWFGAL-------HEDAN--------RVIKPTSSNTAQGRFDTSI 241
Query: 214 ELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETC 273
+ +D + W F +LD + D L +E+ + L E C F +C
Sbjct: 242 LPICKD----------SLGWMFNKLDMN-YDLLLDPSEINAIY--LDKYEPCIKPLFNSC 288
Query: 274 DLDNDKYIALDEWAGCF 290
D D ++ +EW CF
Sbjct: 289 DSFKDGKLSNNEWCYCF 305
>gi|5031701 follistatin-like 3 glycoprotein precursor [Homo sapiens]
Length = 263
Score = 48.1 bits (113), Expect = 9e-06
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 72 CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 131
C++ C + C +D+ + CV CP P +++C N+N T+ SSCH C
Sbjct: 171 CEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGNNNVTYISSCHMRQATCF 230
Query: 132 LEGTKKGHKLHLDYIGPCKYIP 153
L G + + + G C P
Sbjct: 231 L-----GRSIGVRHAGSCAGTP 247
Score = 35.0 bits (79), Expect = 0.082
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Query: 69 ENPCQNHHCKHGKVCELDENNTPMCVCQ-DPTSCPAPIGEFEKVCSNDNKTFDSSCHFFA 127
++ C C GK C + P C C D + PA + +VC +D T+ C A
Sbjct: 96 KDSCDGVECGPGKACRM-LGGRPRCECAPDCSGLPARL----QVCGSDGATYRDECELRA 150
Query: 128 TKCTLEGTKKGH-KLHLDYIGPCK 150
+C +GH L + Y G C+
Sbjct: 151 ARC------RGHPDLSVMYRGRCR 168
>gi|24308277 SPARC related modular calcium binding 2 [Homo sapiens]
Length = 457
Score = 47.0 bits (110), Expect = 2e-05
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 231 VHWQFGQLDQHPIDGYLSHTELAPLRAPLIPM---EHCTTRFFETCDLDNDKYIALDEWA 287
VHW F LD++ G + E+ P + L + C +F E CD++NDK I++ E
Sbjct: 363 VHWYFKLLDKNS-SGDIGKKEIKPFKRFLRKKSKPKKCVKKFVEYCDVNNDKSISVQELM 421
Query: 288 GCFGIKQKD 296
GC G+ ++D
Sbjct: 422 GCLGVAKED 430
Score = 33.1 bits (74), Expect = 0.31
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Query: 111 VCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCL 156
+C++D +TF S C F KC K +L + Y G CK + C+
Sbjct: 52 LCASDGRTFLSRCEFQRAKC------KDPQLEIAYRGNCKDVSRCV 91
>gi|78190498 secreted modular calcium-binding protein 1 isoform 1
[Homo sapiens]
Length = 435
Score = 45.8 bits (107), Expect = 5e-05
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 231 VHWQFGQLDQHPIDGYLSHTELAPLRAPL---IPMEHCTTRFFETCDLDNDKYIALDEWA 287
VHW F QLD + + ++ E+ P + + + C RF + CDL+ DK I+L E
Sbjct: 364 VHWYFSQLDSNSSND-INKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPELK 422
Query: 288 GCFGIKQK 295
GC G+ ++
Sbjct: 423 GCLGVSKE 430
>gi|11545873 secreted modular calcium-binding protein 1 isoform 2
[Homo sapiens]
Length = 434
Score = 45.8 bits (107), Expect = 5e-05
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 231 VHWQFGQLDQHPIDGYLSHTELAPLRAPL---IPMEHCTTRFFETCDLDNDKYIALDEWA 287
VHW F QLD + + ++ E+ P + + + C RF + CDL+ DK I+L E
Sbjct: 364 VHWYFSQLDSNSSND-INKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPELK 422
Query: 288 GCFGIKQK 295
GC G+ ++
Sbjct: 423 GCLGVSKE 430
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 44.7 bits (104), Expect = 1e-04
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 11/95 (11%)
Query: 68 AENPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFA 127
A +PC C G C + +N C C S ++ VC +D T+ S+C A
Sbjct: 464 APSPCLGVQCAFGATCAV-KNGQAACECLQACS-----SLYDPVCGSDGVTYGSACELEA 517
Query: 128 TKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTE 162
T CTL G ++ + GPC C L E
Sbjct: 518 TACTL-----GREIQVARKGPCDRCGQCRFGALCE 547
Score = 42.4 bits (98), Expect = 5e-04
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 63 EEEVVAENPCQN-HHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDS 121
E +V + PC C+ G +CE + T CVC P+ C A + VC +D T+ S
Sbjct: 525 EIQVARKGPCDRCGQCRFGALCEAE---TGRCVC--PSECVALA---QPVCGSDGHTYPS 576
Query: 122 SCHFFATKCTLEGTKKGHKLHLDYIGPCK 150
C CT + LH+ GPC+
Sbjct: 577 ECMLHVHACTHQ-----ISLHVASAGPCE 600
Score = 40.4 bits (93), Expect = 0.002
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 77 CKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTK 136
C+ VC L P C C D +C G + VC+ D +T+DS C +C +
Sbjct: 399 CRFNAVC-LSRRGRPRCSC-DRVTCD---GAYRPVCAQDGRTYDSDCWRQQAEC-----R 448
Query: 137 KGHKLHLDYIGPCKYIP-PCL 156
+ + + GPC P PCL
Sbjct: 449 QQRAIPSKHQGPCDQAPSPCL 469
Score = 37.0 bits (84), Expect = 0.022
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 72 CQNHHCKHGKVCELDENNT--PMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 129
C+ C G VCE + CVC+ + CP+ + VC +D T+ + C +
Sbjct: 172 CRGMLCGFGAVCEPNAEGPGRASCVCKK-SPCPSVVAP---VCGSDASTYSNECELQRAQ 227
Query: 130 CTLEGTKKGHKLHLDYIGPCKYIPPC 155
C+ + ++ L GPC PC
Sbjct: 228 CSQQ-----RRIRLLSRGPCGSRDPC 248
Score = 29.6 bits (65), Expect = 3.4
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
Query: 49 QVEVGEFDDGAEETEEEVVAENPCQNHHCKH-GKVCELDENNTPMCVCQDPTSCPAPIGE 107
Q E G G+ E + C+ C+ G + + D + P CVC SC + G
Sbjct: 666 QAECGSGGSGSGE-------DGDCEQELCRQRGGIWDEDSEDGP-CVCD--FSCQSVPGS 715
Query: 108 FEKVCSNDNKTFDSSCHFFATKC 130
VC +D T+ + C +C
Sbjct: 716 --PVCGSDGVTYSTECELKKARC 736
>gi|5901956 follistatin-like 1 precursor [Homo sapiens]
Length = 308
Score = 44.3 bits (103), Expect = 1e-04
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 20/124 (16%)
Query: 63 EEEVVAENP-CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDS 121
EEE+ +++ C N C G+ C + E P C+C + VC ++ KT+ +
Sbjct: 21 EEELRSKSKICANVFCGAGRECAVTEKGEPTCLCIEQCK-----PHKRPVCGSNGKTYLN 75
Query: 122 SCHFFATKCTLEGTKKGHKLHLDYIGPC---KYIPP------CLDSELTEFPLRMRDWLK 172
C C G K+ +DY G C K + P C S E R+ WL+
Sbjct: 76 HCELHRDACL-----TGSKIQVDYDGHCKEKKSVSPSASPVVCYQSNRDELRRRIIQWLE 130
Query: 173 NVLV 176
++
Sbjct: 131 AEII 134
>gi|134244285 Notch homolog 3 [Homo sapiens]
Length = 2321
Score = 39.3 bits (90), Expect = 0.004
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 13/67 (19%)
Query: 70 NPCQNHHCKHGKVCELDENNTPMCVC----------QDPTSC--PAPIGEFEKVCSNDNK 117
+PC + C+HG CE P+C C QD C PAP G +C+N
Sbjct: 773 SPCTPNPCEHGGRCESAPGQLPVCSCPQGWQGPRCQQDVDECAGPAPCGP-HGICTNLAG 831
Query: 118 TFDSSCH 124
+F +CH
Sbjct: 832 SFSCTCH 838
Score = 29.3 bits (64), Expect = 4.5
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 37 EVTEVSVGANPVQVEVGEFDDGAEETEEEVVAENPCQNHHCKHGKVCELDENNTPMCVCQ 96
+V E S+GANP + +G T+ + CQ G CE D N C+
Sbjct: 391 DVDECSIGANPCE-HLGR----CVNTQGSFL----CQCGRGYTGPRCETDVNECLSGPCR 441
Query: 97 DPTSCPAPIGEFEKVC 112
+ +C IG+F +C
Sbjct: 442 NQATCLDRIGQFTCIC 457
>gi|12383051 transmembrane protein with EGF-like and two
follistatin-like domains 2 [Homo sapiens]
Length = 374
Score = 37.7 bits (86), Expect = 0.013
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 36 AEVTEVSVGANPVQVEVGEFDDGAEETEEEVVAENPCQNHHCKHGKVCELDENNTPMCVC 95
+E+ VS G+ G DG E E + C+ G C+ D + CVC
Sbjct: 125 SEILVVSEGSCATDAGSGS-GDGVHEGSGETSQKETSTCDICQFGAECDEDAEDV-WCVC 182
Query: 96 QDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCK 150
S F +C++D K++D++C C +K K+ + +G C+
Sbjct: 183 NIDCSQT----NFNPLCASDGKSYDNACQIKEASC-----QKQEKIEVMSLGRCQ 228
>gi|122937283 6720455I24Rik homolog [Homo sapiens]
Length = 1413
Score = 35.8 bits (81), Expect = 0.048
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 68 AENPCQNHHCKHGKVCELDENNTPMCVCQ 96
A++PC C+HG C++ EN + +CVCQ
Sbjct: 349 AQSPCDTKECQHGGQCQV-ENGSAVCVCQ 376
>gi|224451128 eyes shut homolog isoform 1 [Homo sapiens]
Length = 3144
Score = 35.4 bits (80), Expect = 0.063
Identities = 34/127 (26%), Positives = 43/127 (33%), Gaps = 42/127 (33%)
Query: 70 NPCQNH-----------HCK-----HGKVCELDENNTPMCVCQDPTSCPAPIGEFEKV-- 111
NPC+N+ HC GK CE+D + CQD C + F +
Sbjct: 858 NPCRNNSTCLALVDANQHCICREEFEGKNCEIDVKDCLFLSCQDYGDCEDMVNNFRCICR 917
Query: 112 -------------------CSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYI 152
C N+ D + FF C E G LD + CK I
Sbjct: 918 PGFSGSLCEIEINECSSEPCKNNGTCVDLTNRFF---CNCEPEYHGPFCELD-VNKCK-I 972
Query: 153 PPCLDSE 159
PCLD E
Sbjct: 973 SPCLDEE 979
>gi|148833508 notch1 preproprotein [Homo sapiens]
Length = 2555
Score = 34.7 bits (78), Expect = 0.11
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 37 EVTEVSVGANPVQVEVGEFDDGAEETEEEVVAENPCQNHHCKHGKVCELDENNTPMCVCQ 96
+V E S+GANP + G+ + E CQ G CE+D N CQ
Sbjct: 412 DVDECSLGANPCE-HAGKCINTLGSFE--------CQCLQGYTGPRCEIDVNECVSNPCQ 462
Query: 97 DPTSCPAPIGEFEKVC 112
+ +C IGEF+ +C
Sbjct: 463 NDATCLDQIGEFQCIC 478
Score = 31.2 bits (69), Expect = 1.2
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 70 NPCQNHHCKHGKVCELDENNTPMCVCQDPTSCP 102
N C + C+HG C+ D +N +C C T+ P
Sbjct: 605 NECSSQPCRHGGTCQ-DRDNAYLCFCLKGTTGP 636
Score = 29.6 bits (65), Expect = 3.4
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 70 NPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDS 121
N C+ CK+G C + N +C+ CPA G C ND +T S
Sbjct: 1309 NGCKGKPCKNGGTCAVASNTARGFICK----CPA--GFEGATCENDARTCGS 1354
>gi|4759146 slit homolog 2 [Homo sapiens]
Length = 1529
Score = 34.7 bits (78), Expect = 0.11
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 72 CQNHHCKHGKVCELDENNTP--MCVCQD---PTSCPAPIGEFEKVCSNDNKTFDSSCHFF 126
C ++ CKHG C L E C+C D +C + + E +N T + +
Sbjct: 961 CISNPCKHGGTCHLKEGEEDGFWCICADGFEGENCEVNVDDCEDNDCENNSTCVDGINNY 1020
Query: 127 ATKCTLEGTKKGHKLHLDY----IGPCKYIPPCL 156
C E T + + LD+ + PC++ C+
Sbjct: 1021 TCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCI 1054
Score = 33.1 bits (74), Expect = 0.31
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 63 EEEVVAENPCQNHHCKHGKVCELDENNTPMCVC 95
+EE NPCQ CKHGK C L P C C
Sbjct: 1407 DEEEDLFNPCQAIKCKHGK-CRLSGLGQPYCEC 1438
>gi|239751787 PREDICTED: hypothetical protein XP_002348012 [Homo
sapiens]
Length = 3003
Score = 32.7 bits (73), Expect = 0.41
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 72 CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 131
CQ H CK G+VC+ CV +DP C ++ C ++ AT C
Sbjct: 1619 CQEHSCKPGQVCQ-PSGGILSCVTKDP--CHGVTCRPQETCKEQGGQGVCLPNYEAT-CW 1674
Query: 132 LEGTKKGHKL---HLDYIGPCKYI 152
L G H D+ G C Y+
Sbjct: 1675 LWGDPHYHSFDGRKFDFQGTCNYV 1698
>gi|154146262 Fc fragment of IgG binding protein [Homo sapiens]
Length = 5405
Score = 32.7 bits (73), Expect = 0.41
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 72 CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 131
CQ H CK G+VC+ CV +DP C ++ C ++ AT C
Sbjct: 1619 CQEHSCKPGQVCQ-PSGGILSCVTKDP--CHGVTCRPQETCKEQGGQGVCLPNYEAT-CW 1674
Query: 132 LEGTKKGHKL---HLDYIGPCKYI 152
L G H D+ G C Y+
Sbjct: 1675 LWGDPHYHSFDGRKFDFQGTCNYV 1698
Score = 32.7 bits (73), Expect = 0.41
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 72 CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 131
CQ H CK G+VC+ CV +DP C ++ C ++ AT C
Sbjct: 4021 CQEHSCKPGQVCQ-PSGGILSCVTKDP--CHGVTCRPQETCKEQGGQGVCLPNYEAT-CW 4076
Query: 132 LEGTKKGHKL---HLDYIGPCKYI 152
L G H D+ G C Y+
Sbjct: 4077 LWGDPHYHSFDGRKFDFQGTCNYV 4100
Score = 32.3 bits (72), Expect = 0.53
Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 22/123 (17%)
Query: 47 PVQVEVGEFDDGAE-ETEEEVVAEN-------------PCQNHHCKHGKVCELDENNTPM 92
P+Q + G + +GA E E+ V+ +N CQ H CK G+VC+
Sbjct: 2782 PIQ-QCGCYHNGAYYEPEQTVLIDNCRQQCTCHVGKVVVCQEHSCKPGQVCQ-PSGGILS 2839
Query: 93 CVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKL---HLDYIGPC 149
CV +DP C ++ C ++ AT C L G H D+ G C
Sbjct: 2840 CVNKDP--CHGVTCRPQETCKEQGGQGVCLPNYEAT-CWLWGDPHYHSFDGRKFDFQGTC 2896
Query: 150 KYI 152
Y+
Sbjct: 2897 NYV 2899
>gi|10190748 CEGP1 protein [Homo sapiens]
Length = 999
Score = 32.0 bits (71), Expect = 0.69
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 28/107 (26%)
Query: 52 VGEFDDGAEETEEEVVAENPCQN-HHCKHGKVCE---LDENNTPMCVCQ----------- 96
VG FD G ++ + + E CQ+ C + C+ ++ T C C
Sbjct: 342 VGSFDCGCKKGFKLLTDEKSCQDVDECSLDRTCDHSCINHPGTFACACNRGYTLYGFTHC 401
Query: 97 -DPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLH 142
D C G ++VC N +++ CH G+KLH
Sbjct: 402 GDTNECSINNGGCQQVCVNTVGSYECQCH------------PGYKLH 436
>gi|51173735 ras responsive element binding protein 1 isoform 2 [Homo
sapiens]
Length = 1687
Score = 32.0 bits (71), Expect = 0.69
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 12/107 (11%)
Query: 13 GRALAAPQQEALPDETEVVEETVAEVTEVSVGANPVQVEVGEFDDGAEETEEEVVAENPC 72
G + A + P++ E ET AEV E + GA E AEETE E+
Sbjct: 1427 GASTAEEGPQPAPEQEEKPPETPAEVVESAPGAGEAPAE-----KLAEETEGPSDGESAA 1481
Query: 73 QNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTF 119
+ + + D++ P P S + + +KVCS NK F
Sbjct: 1482 EKRSSE-----KSDDDKKPK--TDSPKSVASKADKRKKVCSVCNKRF 1521
>gi|51173737 ras responsive element binding protein 1 isoform 1 [Homo
sapiens]
Length = 1742
Score = 32.0 bits (71), Expect = 0.69
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 12/107 (11%)
Query: 13 GRALAAPQQEALPDETEVVEETVAEVTEVSVGANPVQVEVGEFDDGAEETEEEVVAENPC 72
G + A + P++ E ET AEV E + GA E AEETE E+
Sbjct: 1482 GASTAEEGPQPAPEQEEKPPETPAEVVESAPGAGEAPAE-----KLAEETEGPSDGESAA 1536
Query: 73 QNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTF 119
+ + + D++ P P S + + +KVCS NK F
Sbjct: 1537 EKRSSE-----KSDDDKKPK--TDSPKSVASKADKRKKVCSVCNKRF 1576
>gi|33598931 scavenger receptor class F, member 1 isoform 3
precursor [Homo sapiens]
Length = 569
Score = 31.6 bits (70), Expect = 0.91
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 12/63 (19%)
Query: 76 HCKHGKVCELDENNTPMC-------VCQDPTSCPAPIGEFEKVCSNDNKT-FDSSCHFFA 127
HC+HG+ CE D + C C+D P P G F + C + T SC
Sbjct: 312 HCRHGEACEPDTGHCQRCDPGWLGPRCED----PCPTGTFGEDCGSTCPTCVQGSCDTVT 367
Query: 128 TKC 130
C
Sbjct: 368 GDC 370
>gi|33598929 scavenger receptor class F, member 1 isoform 1
precursor [Homo sapiens]
Length = 830
Score = 31.6 bits (70), Expect = 0.91
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 12/63 (19%)
Query: 76 HCKHGKVCELDENNTPMC-------VCQDPTSCPAPIGEFEKVCSNDNKT-FDSSCHFFA 127
HC+HG+ CE D + C C+D P P G F + C + T SC
Sbjct: 312 HCRHGEACEPDTGHCQRCDPGWLGPRCED----PCPTGTFGEDCGSTCPTCVQGSCDTVT 367
Query: 128 TKC 130
C
Sbjct: 368 GDC 370
>gi|29568105 transmembrane protein with EGF-like and two
follistatin-like domains 1 [Homo sapiens]
Length = 380
Score = 31.6 bits (70), Expect = 0.91
Identities = 27/110 (24%), Positives = 39/110 (35%), Gaps = 33/110 (30%)
Query: 72 CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKC- 130
C CK+G VC+ D + C CQ C + VC ++ T+ + C C
Sbjct: 77 CDESSCKYGGVCKEDGDGL-KCACQ--FQCHT---NYIPVCGSNGDTYQNECFLRRAACK 130
Query: 131 --------------------TLEGTKKG-----HKLHLDYIGPCKYIPPC 155
+ EG ++G H+ H GPCKY C
Sbjct: 131 HQKEITVIARGPCYSDNGSGSGEGEEEGSGAEVHRKH-SKCGPCKYKAEC 179
>gi|167614506 L-plastin [Homo sapiens]
Length = 627
Score = 31.2 bits (69), Expect = 1.2
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 244 DGYLSHTELAPL-RAPLIPM-----EHCTTRFFETCDLDNDKYIALDEWAGCF-GIKQKD 296
+GY+S EL L +A +P+ T T DLD D I+ DE+ F G+K D
Sbjct: 26 NGYISFNELNDLFKAACLPLPGYRVREITENLMATGDLDQDGRISFDEFIKIFHGLKSTD 85
Query: 297 IDK 299
+ K
Sbjct: 86 VAK 88
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,832,892
Number of Sequences: 37866
Number of extensions: 605372
Number of successful extensions: 2127
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 2005
Number of HSP's gapped (non-prelim): 142
length of query: 303
length of database: 18,247,518
effective HSP length: 102
effective length of query: 201
effective length of database: 14,385,186
effective search space: 2891422386
effective search space used: 2891422386
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.