| Name: SNRPF | Sequence: fasta or formatted (86aa) | NCBI GI: 4507131 | |
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Description: small nuclear ribonucleoprotein polypeptide F
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 2.3 2 1 C cysteine 1.2 1 1 D aspartate 3.5 3 1 E glutamate 12.8 11 5 F phenylalanine 1.2 1 1 G glycine 11.6 10 1 H histidine 1.2 1 1 I isoleucine 3.5 3 1 K lysine 5.8 5 1 L leucine 12.8 11 1 M methionine 7.0 6 1 N asparagine 7.0 6 2 P proline 4.7 4 1 Q glutamine 1.2 1 1 R arginine 3.5 3 1 S serine 3.5 3 1 T threonine 2.3 2 1 V valine 8.1 7 1 W tryptophan 1.2 1 1 Y tyrosine 5.8 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein polypeptide F LSM6 0.325 Sm protein F LSM4 0.084 U6 snRNA-associated Sm-like protein 4 LSM2 0.045 LSM2 homolog, U6 small nuclear RNA associated SNRPE 0.019 small nuclear ribonucleoprotein polypeptide E LOC100130109 0.019 PREDICTED: similar to hCG23490 LOC100130109 0.019 PREDICTED: similar to hCG23490 LOC100130109 0.019 PREDICTED: hypothetical protein LOC100130109 LSM1 0.013 Lsm1 protein PGBD1 0.013 piggyBac transposable element derived 1 LSM10 0.013 LSM10, U7 small nuclear RNA associated AASS 0.006 aminoadipate-semialdehyde synthaseHuman BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
