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Search of human proteins with 4507103
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507103 small nuclear RNA activating complex, polypeptide 2,
45kDa [Homo sapiens]
(334 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507103 small nuclear RNA activating complex, polypeptide 2, ... 664 0.0
gi|30795231 brain abundant, membrane attached signal protein 1 [... 45 7e-05
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 45 7e-05
gi|16554449 zonadhesin isoform 3 [Homo sapiens] 45 9e-05
gi|27881494 zonadhesin isoform 6 [Homo sapiens] 45 9e-05
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 44 2e-04
gi|91982772 mucin 17 [Homo sapiens] 44 2e-04
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 44 2e-04
gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens] 43 3e-04
gi|145309320 forkhead box Q1 [Homo sapiens] 43 5e-04
gi|210031233 PR domain containing 6 [Homo sapiens] 43 5e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 43 5e-04
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 42 6e-04
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 42 6e-04
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 42 6e-04
gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo s... 42 6e-04
gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo s... 42 6e-04
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 42 8e-04
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 41 0.001
gi|10047086 mitogen-inducible gene 6 protein [Homo sapiens] 41 0.002
gi|56549694 enabled homolog isoform a [Homo sapiens] 41 0.002
gi|39930375 enabled homolog isoform b [Homo sapiens] 41 0.002
gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens] 41 0.002
gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens] 41 0.002
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 41 0.002
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 41 0.002
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 40 0.002
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 40 0.002
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 40 0.002
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 40 0.002
>gi|4507103 small nuclear RNA activating complex, polypeptide 2,
45kDa [Homo sapiens]
Length = 334
Score = 664 bits (1712), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MKPPPRRRAAPARYLGEVTGPATWSAREKRQLVRLLQARQGQPEPDATELARELRGRSEA 60
MKPPPRRRAAPARYLGEVTGPATWSAREKRQLVRLLQARQGQPEPDATELARELRGRSEA
Sbjct: 1 MKPPPRRRAAPARYLGEVTGPATWSAREKRQLVRLLQARQGQPEPDATELARELRGRSEA 60
Query: 61 EIRVFLQQLKGRVAREAIQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAV 120
EIRVFLQQLKGRVAREAIQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAV
Sbjct: 61 EIRVFLQQLKGRVAREAIQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAV 120
Query: 121 AFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPR 180
AFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPR
Sbjct: 121 AFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPR 180
Query: 181 TPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSL 240
TPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSL
Sbjct: 181 TPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSL 240
Query: 241 PEELPLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPPATEKAE 300
PEELPLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPPATEKAE
Sbjct: 241 PEELPLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPPATEKAE 300
Query: 301 HSELKSPWQAAGICPLNPFLVPLELLGRAATPAR 334
HSELKSPWQAAGICPLNPFLVPLELLGRAATPAR
Sbjct: 301 HSELKSPWQAAGICPLNPFLVPLELLGRAATPAR 334
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 45.4 bits (106), Expect = 7e-05
Identities = 45/173 (26%), Positives = 66/173 (38%), Gaps = 46/173 (26%)
Query: 37 QARQGQ--PEPDATELARELRGRSEAEIRVFLQQLKGRVAREAIQKVHPGGLQGPRRREA 94
+A++G+ P+ DA A E G +A A+E K P +G +A
Sbjct: 50 EAKEGKEKPDQDAEGKAEEKEGEKDAA-----------AAKEEAPKAEPEKTEGAAEAKA 98
Query: 95 QPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLL 154
+PP P +E A P + PK +A P
Sbjct: 99 EPPK-------------APEQEQAA-------------PGPAAGGEAPKAAEAAAAPAES 132
Query: 155 SAPGGQEDPAPE----IPSSAPAAPSSAPRTPDPAP---EKPSESSAGPSTEE 200
+AP E+P+ E + APAAP++ D AP KP S A PS++E
Sbjct: 133 AAPAAGEEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSKE 185
Score = 31.6 bits (70), Expect = 1.0
Identities = 45/194 (23%), Positives = 63/194 (32%), Gaps = 35/194 (18%)
Query: 129 AATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPA----------PEIPSSAPAAPSSA 178
AA EP K A GK G++D A PE A A +
Sbjct: 44 AAAEPAEAKEGKEKPDQDAEGKA---EEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAEP 100
Query: 179 PRTPDPAPEKPSESSAG--PSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDL 236
P+ P+ P ++ G P E A E S+ +G P E
Sbjct: 101 PKAPEQEQAAPGPAAGGEAPKAAEAAAAPAE------SAAPAAGEEPSKEEGEPKKT--- 151
Query: 237 LMSLPEELPLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPPAT 296
E P P A E ++ A P P+++ A ++AP TP A
Sbjct: 152 ------EAPAAP--AAQETKSDG---APASDSKPGSSEAAPSSKETPAATEAPSSTPKAQ 200
Query: 297 EKAEHSELKSPWQA 310
A +E P +A
Sbjct: 201 GPAASAEEPKPVEA 214
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 45.4 bits (106), Expect = 7e-05
Identities = 69/247 (27%), Positives = 95/247 (38%), Gaps = 43/247 (17%)
Query: 83 PGGLQGPRRREAQPPAPIEVWTDLAEKITG----PLEEALAVAFSQVLTIAATEPVTLLH 138
P L GP A P PI + LA ++ PL +L ++ L A+ P+T+
Sbjct: 1404 PSSLPGP----ASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPI 1459
Query: 139 SKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPST 198
S P A G LL S P + PAAP P A S + G +T
Sbjct: 1460 S-APLTVSASGPALLTSV-------TPPLAPVVPAAPGPPSLAPSGASPSASALTLGLAT 1511
Query: 199 EEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSL-PEELP-LLPCTALVEHM 256
S S++ P L A S+ V L ++ P P L+P +AL
Sbjct: 1512 APSL------------SSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPF 1559
Query: 257 TETYLRLTAPQPIPAGGS-LGPAAEGDGAGSKAPEETPPATEKAEHSELKSPWQAAGICP 315
+AP P PA S L PA+ A + TP A A + + +P A + P
Sbjct: 1560 P------SAPNPAPAQASLLAPASSASQALA-----TPLAPMAAPQTAILAPSPAPPLAP 1608
Query: 316 LNPFLVP 322
L P L P
Sbjct: 1609 L-PVLAP 1614
Score = 36.6 bits (83), Expect = 0.032
Identities = 59/244 (24%), Positives = 81/244 (33%), Gaps = 53/244 (21%)
Query: 114 LEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPA 173
L +A A S VL A+ + P P QA L AP A P + A
Sbjct: 1537 LNSTVAPACSPVLVPASALASPFPSAPNPAPAQAS-----LLAPASSASQALATPLAPMA 1591
Query: 174 APSSAPRTPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVV 233
AP +A P PAP PS G +P L+++++ V
Sbjct: 1592 APQTAILAPSPAPPLAPLPVLAPS---------------------PGAAPVLASSQTPVP 1630
Query: 234 LDLLMSLP-------EELPLLPCTALVEHMTETYLRLTAPQPIPAGGS-----LGPAAEG 281
+ S P +P P L T+T L P P+P+ S L PA
Sbjct: 1631 VMAPSSTPGTSLASASPVP-APTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAP 1689
Query: 282 DGAGS-------------KAPEETPPATEKAEHSELKSPWQAAGICPLNPFLVPLELLGR 328
GS + P T + S + +P Q + P P L P + L
Sbjct: 1690 TLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAP-GPPLGPTQTLSL 1748
Query: 329 AATP 332
A P
Sbjct: 1749 APAP 1752
Score = 34.7 bits (78), Expect = 0.12
Identities = 44/148 (29%), Positives = 57/148 (38%), Gaps = 36/148 (24%)
Query: 135 TLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSA 194
TL ++ P PT +PLL P+PE+ +SAP A AP T PS S
Sbjct: 1357 TLGTARAPMPTPTLVRPLLKLV----HSPSPEVSASAPGA---APLTISSPLHVPS-SLP 1408
Query: 195 GPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELP-LLPCTALV 253
GP++ S + SP S S V + L SLP +P LP A
Sbjct: 1409 GPAS---------------SPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPA-- 1451
Query: 254 EHMTETYLRLTAPQPIPAGGSLGPAAEG 281
+AP IP L +A G
Sbjct: 1452 ----------SAPLTIPISAPLTVSASG 1469
Score = 29.3 bits (64), Expect = 5.2
Identities = 45/179 (25%), Positives = 63/179 (35%), Gaps = 23/179 (12%)
Query: 124 QVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAP-SSAPRTP 182
+VL AT P PP+P + K + P +++ + + P AP P P
Sbjct: 972 RVLLEVATAP-----DPPPRPKPVKMKVNRMLQPVPKQEGRTVVVVNNPRAPLGPVPVRP 1026
Query: 183 DPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPEL---SAAESAVVLDLLM- 238
P PE ++ + GP ++ VS S P L S V+L L
Sbjct: 1027 PPGPELSAQPTPGP---------VPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQP 1077
Query: 239 ---SLPEELPLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPP 294
SLP+ LP P L L+ PA L PA + P PP
Sbjct: 1078 NSGSLPQVLP-SPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPP 1135
>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
Length = 2812
Score = 45.1 bits (105), Expect = 9e-05
Identities = 56/214 (26%), Positives = 85/214 (39%), Gaps = 20/214 (9%)
Query: 95 QPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLL 154
+P P E + EK + P E+ S TI +TE T+ P KPT KP +
Sbjct: 674 EPVIPTEKPSIPTEKPSIPTEKP---TISMEETIISTEKPTI---SPEKPTIPTEKPTI- 726
Query: 155 SAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPS-TEEDFAVDFEKIYKYL 213
P + +PE P++ P+ P +PEKP+ + P+ + E + EK
Sbjct: 727 --PTEKSTISPEKPTTPTEKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTIPT 784
Query: 214 SSVSRSGRSPELSA------AESAVVLDLLMSLPEELPLLP---CTALVEHMTETYLRLT 264
+ P +S E + S+P E P LP T VE T + +LT
Sbjct: 785 EKPTIPTEKPTISTEEPTTPTEETTISTEKPSIPMEKPTLPTEETTTSVEETTISTEKLT 844
Query: 265 APQPIPAGGSLGPAAEGDGAGSKAPEETPPATEK 298
P P + P + + +PE+ TEK
Sbjct: 845 IPMEKPTISTEKPTIPTE-KPTISPEKLTIPTEK 877
Score = 37.0 bits (84), Expect = 0.025
Identities = 39/144 (27%), Positives = 51/144 (35%), Gaps = 14/144 (9%)
Query: 131 TEPVTLLHSKPP----KPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAP 186
TE T+ KP KPT + KP + S P IPS P + P P P
Sbjct: 581 TEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKP 640
Query: 187 EKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPL 246
PSE STE+ V E+ + S P + + S+P E P
Sbjct: 641 TIPSEKPT-ISTEKP-TVPTEEPTTPTEETTTSMEEPVIPTEKP--------SIPTEKPS 690
Query: 247 LPCTALVEHMTETYLRLTAPQPIP 270
+P M ET + P P
Sbjct: 691 IPTEKPTISMEETIISTEKPTISP 714
Score = 32.0 bits (71), Expect = 0.79
Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 10/124 (8%)
Query: 143 KPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTEEDF 202
KPT + KP + + P IP+ P + P P P PSE PS +
Sbjct: 569 KPTVSIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTI 628
Query: 203 AVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHMTETYLR 262
+ I ++ P +S + V P E P P M E +
Sbjct: 629 LTEKPTIPSEKPTI--PSEKPTISTEKPTV--------PTEEPTTPTEETTTSMEEPVIP 678
Query: 263 LTAP 266
P
Sbjct: 679 TEKP 682
Score = 29.6 bits (65), Expect = 3.9
Identities = 32/117 (27%), Positives = 42/117 (35%), Gaps = 25/117 (21%)
Query: 95 QPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARG----- 149
+P PIE T EK+T P E+ S +TE T+ KP PT+
Sbjct: 884 KPTIPIEETTISTEKLTIPTEKP---TISPEKPTISTEKPTIPTEKPTIPTEETTISTEK 940
Query: 150 ----------KPLLLSAPGGQEDPA-----PEIPSSAPAAPSSAPRTPDPAPEKPSE 191
P L+ P E P P IP+ P+ P P P P+E
Sbjct: 941 LTIPTEKPTISPEKLTIP--TEKPTISTEKPTIPTEKLTIPTEKPTIPTEKPTIPTE 995
>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
Length = 2721
Score = 45.1 bits (105), Expect = 9e-05
Identities = 56/214 (26%), Positives = 85/214 (39%), Gaps = 20/214 (9%)
Query: 95 QPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLL 154
+P P E + EK + P E+ S TI +TE T+ P KPT KP +
Sbjct: 674 EPVIPTEKPSIPTEKPSIPTEKP---TISMEETIISTEKPTI---SPEKPTIPTEKPTI- 726
Query: 155 SAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPS-TEEDFAVDFEKIYKYL 213
P + +PE P++ P+ P +PEKP+ + P+ + E + EK
Sbjct: 727 --PTEKSTISPEKPTTPTEKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTIPT 784
Query: 214 SSVSRSGRSPELSA------AESAVVLDLLMSLPEELPLLP---CTALVEHMTETYLRLT 264
+ P +S E + S+P E P LP T VE T + +LT
Sbjct: 785 EKPTIPTEKPTISTEEPTTPTEETTISTEKPSIPMEKPTLPTEETTTSVEETTISTEKLT 844
Query: 265 APQPIPAGGSLGPAAEGDGAGSKAPEETPPATEK 298
P P + P + + +PE+ TEK
Sbjct: 845 IPMEKPTISTEKPTIPTE-KPTISPEKLTIPTEK 877
Score = 37.0 bits (84), Expect = 0.025
Identities = 39/144 (27%), Positives = 51/144 (35%), Gaps = 14/144 (9%)
Query: 131 TEPVTLLHSKPP----KPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAP 186
TE T+ KP KPT + KP + S P IPS P + P P P
Sbjct: 581 TEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKP 640
Query: 187 EKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPL 246
PSE STE+ V E+ + S P + + S+P E P
Sbjct: 641 TIPSEKPT-ISTEKP-TVPTEEPTTPTEETTTSMEEPVIPTEKP--------SIPTEKPS 690
Query: 247 LPCTALVEHMTETYLRLTAPQPIP 270
+P M ET + P P
Sbjct: 691 IPTEKPTISMEETIISTEKPTISP 714
Score = 32.0 bits (71), Expect = 0.79
Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 10/124 (8%)
Query: 143 KPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTEEDF 202
KPT + KP + + P IP+ P + P P P PSE PS +
Sbjct: 569 KPTVSIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTI 628
Query: 203 AVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHMTETYLR 262
+ I ++ P +S + V P E P P M E +
Sbjct: 629 LTEKPTIPSEKPTI--PSEKPTISTEKPTV--------PTEEPTTPTEETTTSMEEPVIP 678
Query: 263 LTAP 266
P
Sbjct: 679 TEKP 682
Score = 29.6 bits (65), Expect = 3.9
Identities = 32/117 (27%), Positives = 42/117 (35%), Gaps = 25/117 (21%)
Query: 95 QPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARG----- 149
+P PIE T EK+T P E+ S +TE T+ KP PT+
Sbjct: 884 KPTIPIEETTISTEKLTIPTEKP---TISPEKPTISTEKPTIPTEKPTIPTEETTISTEK 940
Query: 150 ----------KPLLLSAPGGQEDPA-----PEIPSSAPAAPSSAPRTPDPAPEKPSE 191
P L+ P E P P IP+ P+ P P P P+E
Sbjct: 941 LTIPTEKPTISPEKLTIP--TEKPTISTEKPTIPTEKLTIPTEKPTIPTEKPTIPTE 995
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 44.3 bits (103), Expect = 2e-04
Identities = 68/325 (20%), Positives = 118/325 (36%), Gaps = 33/325 (10%)
Query: 1 MKPPPRRRAAPARYLGEVTGPATWSAREKRQLVRLLQARQGQP---EPDATELARELRGR 57
++PPP A + E+ P+ + L +L + EP A L
Sbjct: 316 VQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAEESPSEEPPAEILPPPAEKS 375
Query: 58 SEAEIRVFLQQLKGRVAREAIQKVHPGGLQGPRRR---EAQPPAPIEVWTDLAEKIT--G 112
E+ L +++ A++A +V P +G + +PP E D+ +
Sbjct: 376 PSVEL---LGEIRSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEETLADVQPLLPEEA 432
Query: 113 PLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAP 172
P EEA + S + A E T S PK T A + E PA E P+ A
Sbjct: 433 PREEARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAATEPPADETPAEA- 491
Query: 173 AAPSSAPRTPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSV----------SRSGRS 222
+P + + + E+ P EE A + + L+++ ++S S
Sbjct: 492 ----RSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPADETPAEAQSPLS 547
Query: 223 PELSAAESAVVLDLLMSLPEELPLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGD 282
E SA E+ + + + P ET TA + A ++ A +
Sbjct: 548 EETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEET----TAEE---ASAAIQLLAATE 600
Query: 283 GAGSKAPEETPPATEKAEHSELKSP 307
+ +AP E P + +E++ P
Sbjct: 601 ASAEEAPAEVQPPPAEEAPAEVQPP 625
Score = 41.6 bits (96), Expect = 0.001
Identities = 71/272 (26%), Positives = 106/272 (38%), Gaps = 34/272 (12%)
Query: 2 KPPPRRRAAPARY-LGEVTGPATWSAREKRQLVRLLQARQGQPEPDATELARELRGRSEA 60
+PP A AR L E T SA E V+ A + E + E+ +L EA
Sbjct: 481 EPPADETPAEARSPLSEET-----SAEEAHAEVQSPLAEETTAEEASAEI--QLLAAIEA 533
Query: 61 EIRVFLQQLKGRVAREAIQKVHPGGLQGPRRREAQ-PPAPIEVWTDLAEKITGPLEEALA 119
+ + ++ E + P +Q P + AP+E+ E+ T EEA A
Sbjct: 534 PADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTA--EEASA 591
Query: 120 VAFSQVLTIAATEPVTLLHSKPP--------KPTQARGKPLLLSAPGGQEDPAPEIPSSA 171
T A+ E PP +P A P + P +E PA P A
Sbjct: 592 AIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPA 651
Query: 172 PAAPSSAPRTPDPAPEKPSESSAGPSTE-----EDFAVDFEKIYKYLSSVSRSGRSPELS 226
AP+ P PA E P+E P+ E + + I + L++V S + ++
Sbjct: 652 EEAPAEVQ--PPPAEEAPAEVQPPPAEEAPAEVQSLPAEETPIEETLAAV-HSPPADDVP 708
Query: 227 AAESAV-----VLDLLMSLPEELPLLPCTALV 253
A E++V DLL L EE P+ +A V
Sbjct: 709 AEEASVDKHSPPADLL--LTEEFPIGEASAEV 738
Score = 30.8 bits (68), Expect = 1.8
Identities = 47/187 (25%), Positives = 69/187 (36%), Gaps = 15/187 (8%)
Query: 21 PATWSAREKRQLVRLLQARQGQPEPDATELARELRG--RSEAEIRVFLQQLKGRVAREAI 78
P +A E ++LL A EP A E E R E +++ +A E
Sbjct: 462 PKETTAEEASAEIQLLAAT----EPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETT 517
Query: 79 QKVHPGGLQGPRRREAQPP-APIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLL 137
+ +Q EA P E + L+E+ + EEA A S + E L
Sbjct: 518 AEEASAEIQLLAAIEAPADETPAEAQSPLSEETSA--EEAPAEVQSPSAKGVSIEEAPL- 574
Query: 138 HSKPPKPTQARGKPL-----LLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSES 192
+PP + + LL+A + AP PA + A P PA E P+E
Sbjct: 575 ELQPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEV 634
Query: 193 SAGPSTE 199
P+ E
Sbjct: 635 QPPPAEE 641
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 43.9 bits (102), Expect = 2e-04
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 32/218 (14%)
Query: 99 PIEVWTDLAEKITGPLEEALAVAFSQVLTIAATE-----PVTLLHSKPPKPTQARGKPLL 153
PI ++++ +T L + VA S+ T++ T PVT PT A G +
Sbjct: 2919 PISTPSEVSTPLTSILVSTVPVAGSEASTLSTTPVDTRTPVTTSAEASSSPTTAEGTSMP 2978
Query: 154 LSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPS-------ESSAGPSTEEDFAVDF 206
+S PG + P + S SS T P S E+S+ P+T E +
Sbjct: 2979 ISTPGERRTPLTSMSVSTMPVASSEASTLSRTPADTSTPVTTSTEASSSPTTAEGTGIPI 3038
Query: 207 EKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPE--ELPLLPCTALVEHMTETYLRLT 264
S G +P S S +++PE L P + +T T +
Sbjct: 3039 --------STPSEGSTPLTSIPVSTTP----VAIPEASTLSTTPVDSNSPVVTSTEV--- 3083
Query: 265 APQPIPAGGSLGPA---AEGDGAGSKAPEETPPATEKA 299
+ P PA G+ P +EG + P T P T A
Sbjct: 3084 SSSPTPAEGTSMPISTYSEGSTPLTGVPVSTTPVTSSA 3121
Score = 38.9 bits (89), Expect = 0.007
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 12/107 (11%)
Query: 110 ITGPLEEALAVAFSQVLTIAATE-----PVTLLHSKPPKPTQARGKPLLLSAPGGQEDPA 164
+T + VA S+ +T+ T PVT+ PT A G L SAP G P
Sbjct: 218 LTSMPASTMKVASSEAITLLTTPVEISTPVTISAQASSSPTTAEGPSLSNSAPSGGSTPL 277
Query: 165 PEIPSSAPAAPSSAPRTPDPAPE-------KPSESSAGPSTEEDFAV 204
+P S SS T P +E+S+ P+T E ++
Sbjct: 278 TRMPLSVMLVVSSEASTLSTTPAATNIPVITSTEASSSPTTAEGTSI 324
Score = 38.9 bits (89), Expect = 0.007
Identities = 60/254 (23%), Positives = 91/254 (35%), Gaps = 29/254 (11%)
Query: 99 PIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEP-----VTLLHSKPPKPTQARGKPLL 153
PI ++++ +T L + VA S+ T++ T VT PT A G +
Sbjct: 2624 PISTPSEVSTSLTSILVSTMPVASSEASTLSTTPVDTRTLVTTSTGTSSSPTTAEGSSMP 2683
Query: 154 LSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPS-------ESSAGPSTEEDFAVDF 206
S PG + P I S +S T P S E+S+ P+T E ++
Sbjct: 2684 TSTPGERSTPLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSAEASSSPTTAEGTSMRI 2743
Query: 207 E-------KIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHM-TE 258
+ L S S + + +AV + ++ E P TA V M T
Sbjct: 2744 STPSDGSTPLTSILVSTLPVASSEASTVSTTAVDTSIPVTTSTEASSSPTTAEVTSMPTS 2803
Query: 259 TYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEET-PPATEKAEHSELKSPWQAAGICPLN 317
T + P A+ G S P +T P T + S SP A GI
Sbjct: 2804 TPSETSTPLTSMPVNHTPVASSEAGTLSTTPVDTSTPVTTSTKAS--SSPTTAEGI---- 2857
Query: 318 PFLVPLELLGRAAT 331
+VP+ +T
Sbjct: 2858 --VVPISTASEGST 2869
Score = 36.2 bits (82), Expect = 0.042
Identities = 45/199 (22%), Positives = 72/199 (36%), Gaps = 26/199 (13%)
Query: 99 PIEVWTDLAEKITGPLEEALAVAFSQVLTIAATE-----PVTLLHSKPPKPTQARGKPLL 153
P +++ +T VA S + T++ T PVT PT + G +
Sbjct: 856 PTSTYSEGRTPLTSMPVSTTLVATSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMP 915
Query: 154 LSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPS-------ESSAGPSTEEDFAVDF 206
S PG P +P S SS RT P S E+++ P+T E ++
Sbjct: 916 TSTPGEGSTPLTSMPDSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIP- 974
Query: 207 EKIYKYLSSVSRSGRSPELSAAES-AVVLDLLMSLPEELPLLPCTALVEHMTETYLRLTA 265
+S G +P S S +V + S P+ T L T ++
Sbjct: 975 -------TSTPSEGTTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLT-----TSTEASS 1022
Query: 266 PQPIPAGGSLGPAAEGDGA 284
P P G S+ + +G+
Sbjct: 1023 PPPTAEGTSMPTSTPSEGS 1041
Score = 36.2 bits (82), Expect = 0.042
Identities = 49/217 (22%), Positives = 77/217 (35%), Gaps = 26/217 (11%)
Query: 99 PIEVWTDLAEKITGPLEEALAVAFSQVLTIAATE-----PVTLLHSKPPKPTQARGKPLL 153
P +T+ +T VA S + T++ T PVT PT + G +
Sbjct: 1681 PTSTYTEGRTPLTSITVRTTPVASSAISTLSTTPVDNSTPVTTSTEARSSPTTSEGTSMP 1740
Query: 154 LSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPS-------ESSAGPSTEEDFAVDF 206
S P P IP S SS T P S E+++ P+T E ++
Sbjct: 1741 NSTPSEGTTPLTSIPVSTTPVLSSEASTLSATPIDTSTPVTTSTEATSSPTTAEGTSIPT 1800
Query: 207 EKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHMTETYLRLTAP 266
+ + ++ ++ + S L A A L + P++ TA+ +
Sbjct: 1801 STLSEGMTPLTSTPVSHTLVANSEASTLS-TTPVDSNSPVVTSTAV------------SS 1847
Query: 267 QPIPAGGSLGPAAEGDGAGSKAPEETPPATEKAEHSE 303
P PA G+ A GS A P +T SE
Sbjct: 1848 SPTPAEGT-SIATSTPSEGSTALTSIPVSTTTVASSE 1883
Score = 33.9 bits (76), Expect = 0.21
Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 12/118 (10%)
Query: 99 PIEVWTDLAEKITGPLEEALAVAFSQVLTIAATE-----PVTLLHSKPPKPTQARGKPLL 153
P +++ + +T + V S+ T + T PVT PT A G +
Sbjct: 2388 PTSTYSEGSTPLTSVPVSTMPVVSSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGTSIP 2447
Query: 154 LSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPS-------ESSAGPSTEEDFAV 204
S P P +P S SS T P S E+S+ P+T ED V
Sbjct: 2448 TSPPSEGTTPLASMPVSTTPVVSSEAGTLSTTPVDTSTPMTTSTEASSSPTTAEDIVV 2505
Score = 33.1 bits (74), Expect = 0.36
Identities = 30/114 (26%), Positives = 41/114 (35%), Gaps = 12/114 (10%)
Query: 99 PIEVWTDLAEKITGPLEEALAVAFSQVLTIAATE-----PVTLLHSKPPKPTQARGKPLL 153
P +T+ + +T VA S+ T++ T PVT PT A G +
Sbjct: 679 PTSTYTEGSTPLTSMPVNTTLVASSEASTLSTTPVDTSTPVTTSTEASSSPTTADGASMP 738
Query: 154 LSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPS-------ESSAGPSTEE 200
S P P +P S SS T P S E+S P+T E
Sbjct: 739 TSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTSTHITTSTEASCSPTTTE 792
Score = 31.6 bits (70), Expect = 1.0
Identities = 43/195 (22%), Positives = 65/195 (33%), Gaps = 21/195 (10%)
Query: 119 AVAFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSA 178
A++ + + PVT PT + G + S P P IP S SS
Sbjct: 1353 AISILSTTPVDNSTPVTTSTEACSSPTTSEGTSMPNSNPSEGTTPLTSIPVSTTPVVSSE 1412
Query: 179 PRTPDPAPEKPS-------ESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESA 231
T P S E+++ P+T E ++ +S G++P S S
Sbjct: 1413 ASTLSATPVDTSTPGTTSAEATSSPTTAEGISIP--------TSTPSEGKTPLKSIPVSN 1464
Query: 232 VVLDLLMSLPEELPLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEE 291
+ E L T + + + P PA G+ A GS A
Sbjct: 1465 TPV-----ANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGT-SIAISTPSEGSTALTS 1518
Query: 292 TPPATEKAEHSELKS 306
P +T SE+ S
Sbjct: 1519 IPVSTTTVASSEINS 1533
Score = 29.6 bits (65), Expect = 3.9
Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 5/93 (5%)
Query: 99 PIEVWTDLAEKITGPLEEALAVAFSQVLTIAATE-----PVTLLHSKPPKPTQARGKPLL 153
PI +++ + +TG V S + T++ T PVT PT + G +
Sbjct: 3096 PISTYSEGSTPLTGVPVSTTPVTSSAISTLSTTPVDTSTPVTTSTEAHSSPTTSEGTSMP 3155
Query: 154 LSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAP 186
S P P +P S SS T P
Sbjct: 3156 TSTPSEGSTPLTYMPVSTMLVVSSEDSTLSATP 3188
Score = 29.3 bits (64), Expect = 5.2
Identities = 47/225 (20%), Positives = 75/225 (33%), Gaps = 25/225 (11%)
Query: 110 ITGPLEEALAVAFSQVLTIAATE-----PVTLLHSKPPKPTQARGKPLLLSAPGGQEDPA 164
+T + VA S+ T++ T PVT T G + S P P
Sbjct: 513 LTSMSVSTMPVASSEASTLSTTPVDTSTPVTTSSEASSSSTTPEGTSIPTSTPSEGSTPL 572
Query: 165 PEIPSSAPAAPSSAPRTPDPAP-------EKPSESSAGPSTEEDFAVDFEKIYKYLSSVS 217
+P S SS T P SE+S+ +T E ++ + ++++
Sbjct: 573 TNMPVSTRLVVSSEASTTSTTPADSNTFVTTSSEASSSSTTAEGTSMPTSTYSERGTTIT 632
Query: 218 RSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHM---------TETYLRLTAP-Q 267
S L A+ A L + P+ T T TY + P
Sbjct: 633 SMSVSTTLVASSEASTLS-TTPVDSNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLT 691
Query: 268 PIPAGGSLGPAAEGDGAGSKAPEETPPATEKAEHSELKSPWQAAG 312
+P +L ++E + + + P T E S SP A G
Sbjct: 692 SMPVNTTLVASSEASTLSTTPVDTSTPVTTSTEAS--SSPTTADG 734
Score = 29.3 bits (64), Expect = 5.2
Identities = 32/117 (27%), Positives = 46/117 (39%), Gaps = 18/117 (15%)
Query: 99 PIEVWTDLAEKITGPLEEALAVAFSQVLTIAATE-----PVTLLHSKPPKPTQARGKPLL 153
PI ++ + +T VA S+ T++ T PVT PT A G +
Sbjct: 2860 PISTASEGSTLLTSIPVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMP 2919
Query: 154 LSAPGGQEDPAPEI-PSSAPAAPSSA---------PRTPDPAPEKPSESSAGPSTEE 200
+S P P I S+ P A S A RTP +E+S+ P+T E
Sbjct: 2920 ISTPSEVSTPLTSILVSTVPVAGSEASTLSTTPVDTRTP---VTTSAEASSSPTTAE 2973
Score = 28.9 bits (63), Expect = 6.7
Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 6/106 (5%)
Query: 99 PIEVWTDLAEKITGPLEEALAVAFSQVLTIAATE-----PVTLLHSKPPKPTQARGKPLL 153
P +++ + +T V S+ T++ T PVT PT A G +
Sbjct: 1092 PTSTYSEGSTPLTSVPVSTRLVVSSEASTLSTTPVDTSIPVTTSTEASSSPTTAEGTSIP 1151
Query: 154 LSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTE 199
S P P +P S SS T P S++ STE
Sbjct: 1152 TSPPSEGTTPLASMPVSTTLVVSSEANTLSTTP-VDSKTQVATSTE 1196
Score = 28.9 bits (63), Expect = 6.7
Identities = 31/127 (24%), Positives = 44/127 (34%), Gaps = 20/127 (15%)
Query: 120 VAFSQVLTIAAT-----EPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAA 174
VA S+ T++ T PV + PT A G + S P IP S
Sbjct: 1820 VANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIATSTPSEGSTALTSIPVSTTTV 1879
Query: 175 PSSAPRTPDPAPEKPS-------ESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSA 227
SS T P S + S+ P+T + ++ +S R GR P S
Sbjct: 1880 ASSETNTLSTTPAVTSTPVTTYAQVSSSPTTADGSSMP--------TSTPREGRPPLTSI 1931
Query: 228 AESAVVL 234
S +
Sbjct: 1932 PVSTTTV 1938
Score = 28.9 bits (63), Expect = 6.7
Identities = 41/193 (21%), Positives = 67/193 (34%), Gaps = 24/193 (12%)
Query: 103 WTDLAEKITGPLEEALAVAFSQVLTIAATE-----PVTLLHSKPPKPTQARGKPLLLSAP 157
++D +T VA S + T++ T PVT PT + G + S P
Sbjct: 2156 YSDRRTPLTSMPVSTTVVASSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTP 2215
Query: 158 GGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPS-------ESSAGPSTEEDFAVDFEKIY 210
P +P S +S T P S E+++ P+T E ++
Sbjct: 2216 SEGSTPFTSMPVSTMPVVTSEASTLSATPVDTSTPVTTSTEATSSPTTAEGTSIP----- 2270
Query: 211 KYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHMTETYLRLTAPQPIP 270
+S G +P S S + + S L P + T T ++P P
Sbjct: 2271 ---TSTLSEGTTPLTSIPVSHTL--VANSEVSTLSTTPVDSNTPFTTST--EASSPPPTA 2323
Query: 271 AGGSLGPAAEGDG 283
G S+ + +G
Sbjct: 2324 EGTSMPTSTSSEG 2336
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 43.9 bits (102), Expect = 2e-04
Identities = 50/193 (25%), Positives = 73/193 (37%), Gaps = 20/193 (10%)
Query: 140 KPPKPTQARGK--PLLLSAPGGQEDPAPEIPSSAPAAPSSA---PRTPDPAPEKPSESSA 194
+P P A G+ P+L P Q PA P A P+ P P P +++
Sbjct: 604 QPATPAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQATT 663
Query: 195 GPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVE 254
P A EKI G+ P + L M LP+E P +A
Sbjct: 664 -PQPSPGLASSPEKIVL--------GQPPSATPTAILTQDSLQMFLPQERSQQPLSAEGP 714
Query: 255 HMT-ETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPE---ETPPATEKAEHSELKSPWQA 310
H++ + ++AP P P A+G G G +AP+ PA + + LK P +
Sbjct: 715 HLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPS 774
Query: 311 AGICPLNPFLVPL 323
+ P P PL
Sbjct: 775 SS--PSLPHQAPL 785
Score = 29.3 bits (64), Expect = 5.2
Identities = 68/279 (24%), Positives = 97/279 (34%), Gaps = 40/279 (14%)
Query: 4 PPRRRAAPARYLGEVTGPATWSAREKRQLVRLLQARQGQPEPDATELARELRGRSEAEIR 63
P + AAP + P S+ EK L GQP P AT A ++ ++
Sbjct: 651 PTPQAAAPPQATTPQPSPGLASSPEKIVL--------GQP-PSATPTAI----LTQDSLQ 697
Query: 64 VFLQQLKGR--VAREAIQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKI-TGPLEEALAV 120
+FL Q + + ++ E P + AQ PAP T +A+ GP
Sbjct: 698 MFLPQERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAPA---TPVAKGAGLGPQAPDSQA 754
Query: 121 AFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEI---PSSAPAAPSS 177
+ + I A P+ K P P+ + P P+P PS P+ P S
Sbjct: 755 SPAPAPQIPAAAPL-----KGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQS 809
Query: 178 APRTPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLL 237
R P P P P T V ++ V +P +A
Sbjct: 810 VSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQL-----GVPPPASNPAPTAPGPPQPPLRP 864
Query: 238 MSLPEELPLLPC--------TALVEHMTETYLRLTAPQP 268
S P E PL P ++ V +ET RL AP P
Sbjct: 865 QSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTP 903
>gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]
Length = 1321
Score = 43.1 bits (100), Expect = 3e-04
Identities = 83/298 (27%), Positives = 107/298 (35%), Gaps = 65/298 (21%)
Query: 68 QLKGRVAREAIQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVL- 126
+ KG R Q+ GLQG AQPP +E +E LA+A +++L
Sbjct: 482 RFKGLNGRYFQQQEPEPGLQGGMEASAQPPT--------SEAAVNQMEPPLAMAVTEMLG 533
Query: 127 TIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEI--PSSAPAAPSSAPRTPDP 184
+ + P L ++ P + GG+ P P + P+ P + S R P
Sbjct: 534 SGQSRSPWADLTNEVDMPG--------AGSAGGKSSPEPWLWPPTMVPPSISGHSRAPVL 585
Query: 185 APEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLM------ 238
EK SA P+T + F E ++VS +P A A DL M
Sbjct: 586 ELEKAEGPSARPATPDLFWSPLE------ATVSAPSPAP-WEAFPVATSPDLPMMAMLRG 638
Query: 239 ----SLPEELPLLPCTALVEHMTETYLRLTAPQPIPAGG--------SLGPAAEGDGAGS 286
LP P+ VE E TAP P PA SL P +G A
Sbjct: 639 PKEWMLPHPTPISTEANRVEAHGEA--TATAP-PSPAAETKVYSLPLSLTPTGQGGEAMP 695
Query: 287 KAPE----------ETPPA-TEKAEHSELKSPWQ------AAGICPLNPFLVPLELLG 327
PE ET PA KAEHS SPW A G P P L G
Sbjct: 696 TTPESPRADFRETGETSPAQVNKAEHSS-SSPWPSVNRNVAVGFVPTETATEPTGLRG 752
>gi|145309320 forkhead box Q1 [Homo sapiens]
Length = 403
Score = 42.7 bits (99), Expect = 5e-04
Identities = 49/171 (28%), Positives = 68/171 (39%), Gaps = 28/171 (16%)
Query: 156 APGGQEDPAPEIPSSAPAAPS--SAPRTPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYL 213
APG + + AP +P++ P AP+ ++PR PA ++ S AG FA+D + K
Sbjct: 224 APGLRPEEAPGLPAAPPPAPAAPASPRMRSPARQEERASPAG-KFSSSFAID-SILRKPF 281
Query: 214 SSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHMTETYLRLTAPQPIPAGG 273
S +P + A L + P LP PC AL+ P+ A G
Sbjct: 282 RSRRLRDTAPGTTLQWGAAPCPPLPAFPALLPAAPCRALL--------------PLCAYG 327
Query: 274 SLGPAAEGDGAGSKAPEETP----PATEKAEHSELKSPWQAAG----ICPL 316
+ PA G P P P A L+ P AAG CPL
Sbjct: 328 AGEPARLGAREAEVPPTAPPLLLAPLPAAAPAKPLRGP--AAGGAHLYCPL 376
>gi|210031233 PR domain containing 6 [Homo sapiens]
Length = 595
Score = 42.7 bits (99), Expect = 5e-04
Identities = 44/148 (29%), Positives = 55/148 (37%), Gaps = 25/148 (16%)
Query: 144 PTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTEEDFA 203
P + G LLSAP + P P P P A PD +P+ S+ ST
Sbjct: 34 PLKGSGAAGLLSAPQPLQPPPP------PPPPERAEPPPDSLRPRPASLSSASSTPAS-- 85
Query: 204 VDFEKIYKYLSSVSRSGRSPELSAAESAVVLDL----LMSLPEELPLLPCTALVEHMTET 259
SS S S S +AA +A + L + LP PL E +
Sbjct: 86 ----------SSTSASSASSCAAAAAAAALAGLSALPVSQLPVFAPLAAAAVAAEPLPPK 135
Query: 260 YLRLTA---PQPIPAGGSLGPAAEGDGA 284
L L A P P+ GG G EG GA
Sbjct: 136 ELCLGATSGPGPVKCGGGGGGGGEGRGA 163
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 42.7 bits (99), Expect = 5e-04
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 140 KPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPS 197
+PP P Q KP++ PG PAP + S+ PA+ S+ P TP P P S GP+
Sbjct: 98 QPPPPPQDSSKPVVAQGPG----PAPGVGSAPPASSSAPPATP-PTSGAPPGSGPGPT 150
Score = 31.2 bits (69), Expect = 1.4
Identities = 29/114 (25%), Positives = 41/114 (35%), Gaps = 20/114 (17%)
Query: 89 PRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQAR 148
P +++ PP P + + + GP + + P + S PP
Sbjct: 93 PHQQQQPPPPPQDSSKPVVAQGPGPAPG-----------VGSAPPAS--SSAPPATPPTS 139
Query: 149 GKPLLLSAPGGQEDPAPEIPSSAPAAP------SSAPRTPDPAPEKPSESSAGP 196
G P S PG P P + S+ P AP S P TP A P +A P
Sbjct: 140 GAPPG-SGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVP 192
>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
sapiens]
Length = 834
Score = 42.4 bits (98), Expect = 6e-04
Identities = 76/312 (24%), Positives = 114/312 (36%), Gaps = 52/312 (16%)
Query: 25 SAREKRQLVRLLQARQGQ-------PEPDATELARELRGRSEAEIRVFLQQL--KGRVAR 75
S+ ++++ V+LL +R+G+ P+ + A +L +A ++ F Q L K A
Sbjct: 84 SSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQWFNQALEDKSDAAS 143
Query: 76 EAIQKVHPGGLQGPRRREAQPPA-PIEVWTDLAEKITGPLEEAL-----------AVAFS 123
++ + P + P P A P T L T PL E+L +
Sbjct: 144 NSVTETPP--ITQPSFTFTLPAAAPASPPTSLLAPSTNPLLESLKKMQTPPSLPPCPESA 201
Query: 124 QVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPD 183
T A P + PP G P LL +P +P + P APS P T
Sbjct: 202 GAATTEALSPPKTPNLLPPLGLSQSGPPGLLPSPSFDSNPPTTLLGLIP-APSMVPATDT 260
Query: 184 PAP--------EKPSESSA-GPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESA-VV 233
AP KP +SA P+ ++ F + + S SP AA SA +
Sbjct: 261 KAPPTLQAETTTKPQATSAPSPAPKQSF---------LFGTQNTSPSSPAAPAASSASPM 311
Query: 234 LDLLMSLPEEL---------PLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGA 284
+ + P + P + TA T TAP P S+GP A
Sbjct: 312 FKPIFTAPPKSEKEGPTPPGPSVSATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASVPLP 371
Query: 285 GSKAPEETPPAT 296
+ T PAT
Sbjct: 372 APFFKQTTTPAT 383
Score = 28.9 bits (63), Expect = 6.7
Identities = 57/242 (23%), Positives = 75/242 (30%), Gaps = 49/242 (20%)
Query: 107 AEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKP-----------------PKPTQARG 149
A T PL LA A S V I + P T SKP A
Sbjct: 384 APTTTAPLFTGLASATSAVAPITSASPSTDSASKPAFGFGINSVSSSSVSTTTSTATAAS 443
Query: 150 KPLLLSAPGGQEDPAPEIPSSAP----AAPSSAPRTPDPAPEKPSESSAGPSTEEDFAVD 205
+P L AP Q A P+ P + P T S +A P+ A D
Sbjct: 444 QPFLFGAP--QASAASFTPAMGSIFQFGKPPALPTTTTVTTFSQSLPTAVPTATSSSAAD 501
Query: 206 FEKIYKYL-SSVSRSGRSPELSAAESAVV---LDLLMSLPEELPLLPCTALVEHMTETYL 261
F L +S + P L+ + ++ + S LP P
Sbjct: 502 FSGFGSTLATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLPSYP------------- 548
Query: 262 RLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPPATEKAEHSELKSPWQAAGICPLNPFLV 321
P PA G AAEG G+ P TP +P AA P P ++
Sbjct: 549 ---GANPQPAFG----AAEGQPPGAAKPALTPSFGSSFTFGNSAAP--AAAPTPAPPSMI 599
Query: 322 PL 323
+
Sbjct: 600 KI 601
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 42.4 bits (98), Expect = 6e-04
Identities = 46/184 (25%), Positives = 72/184 (39%), Gaps = 50/184 (27%)
Query: 20 GPATWSAREKRQLVRLLQA----RQGQPEPDATELA----RELRGRSEAEIRVFLQQLKG 71
GP+ +S + QL + A +GQP P+ +LA R L G + + QQ +
Sbjct: 170 GPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQ-----QQQQQ 224
Query: 72 RVAREAIQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAAT 131
+ ++ Q+ Q ++ + QPP P T
Sbjct: 225 QQQQQQQQQ------QQQQQPQQQPPQP--------------------------QTQQQQ 252
Query: 132 EPVTLLHSKPPKPTQARGKP-----LLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAP 186
+P + +++P P P L + APGG+ PAP + PAA P P PAP
Sbjct: 253 QPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAP 312
Query: 187 EKPS 190
+PS
Sbjct: 313 GQPS 316
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 42.4 bits (98), Expect = 6e-04
Identities = 46/184 (25%), Positives = 72/184 (39%), Gaps = 50/184 (27%)
Query: 20 GPATWSAREKRQLVRLLQA----RQGQPEPDATELA----RELRGRSEAEIRVFLQQLKG 71
GP+ +S + QL + A +GQP P+ +LA R L G + + QQ +
Sbjct: 170 GPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQ-----QQQQQ 224
Query: 72 RVAREAIQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAAT 131
+ ++ Q+ Q ++ + QPP P T
Sbjct: 225 QQQQQQQQQ------QQQQQPQQQPPQP--------------------------QTQQQQ 252
Query: 132 EPVTLLHSKPPKPTQARGKP-----LLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAP 186
+P + +++P P P L + APGG+ PAP + PAA P P PAP
Sbjct: 253 QPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAP 312
Query: 187 EKPS 190
+PS
Sbjct: 313 GQPS 316
>gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo
sapiens]
Length = 1074
Score = 42.4 bits (98), Expect = 6e-04
Identities = 54/196 (27%), Positives = 74/196 (37%), Gaps = 34/196 (17%)
Query: 16 GEVTGPATWSAREKRQLVRLLQ-ARQGQP----------EPDATELARELRG-RSEAEIR 63
G + GPA+ RE+ Q +R + +R P P A L R R RS
Sbjct: 123 GPLRGPASHLGREETQEIRAARRSRLRDPIKPGMFGYGRVPFALPLHRNRRHPRSPPRSE 182
Query: 64 VFLQQLKGRVAREA-IQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAVAF 122
+ L +G A + + P G + E P T+L+ P E L+
Sbjct: 183 LSLISSRGEEAIPSPTPRAEPFSANGSPQTELPP-------TELSVHTPSPQAEPLSPET 235
Query: 123 SQVLTIAATEPVTLLH--------SKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAP-A 173
+Q T P L H ++PP PT + G+ A P P PSS A
Sbjct: 236 AQTEVAPRTRPAPLRHHPRAQASGTEPPSPTHSLGEGGFFRA-----SPQPRRPSSQGWA 290
Query: 174 APSSAPRTPDPAPEKP 189
+P A R PDP P P
Sbjct: 291 SPQVAGRRPDPFPSVP 306
>gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo
sapiens]
Length = 877
Score = 42.4 bits (98), Expect = 6e-04
Identities = 54/196 (27%), Positives = 74/196 (37%), Gaps = 34/196 (17%)
Query: 16 GEVTGPATWSAREKRQLVRLLQ-ARQGQP----------EPDATELARELRG-RSEAEIR 63
G + GPA+ RE+ Q +R + +R P P A L R R RS
Sbjct: 123 GPLRGPASHLGREETQEIRAARRSRLRDPIKPGMFGYGRVPFALPLHRNRRHPRSPPRSE 182
Query: 64 VFLQQLKGRVAREA-IQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAVAF 122
+ L +G A + + P G + E P T+L+ P E L+
Sbjct: 183 LSLISSRGEEAIPSPTPRAEPFSANGSPQTELPP-------TELSVHTPSPQAEPLSPET 235
Query: 123 SQVLTIAATEPVTLLH--------SKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAP-A 173
+Q T P L H ++PP PT + G+ A P P PSS A
Sbjct: 236 AQTEVAPRTRPAPLRHHPRAQASGTEPPSPTHSLGEGGFFRA-----SPQPRRPSSQGWA 290
Query: 174 APSSAPRTPDPAPEKP 189
+P A R PDP P P
Sbjct: 291 SPQVAGRRPDPFPSVP 306
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 42.0 bits (97), Expect = 8e-04
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 89 PRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKP-PKP-TQ 146
P EA P E +LA GP EA + + +++ T EP T S+P P+P T+
Sbjct: 44 PLLSEASPEPIPEPCPELAP---GPCPEATSESATELYTEPTPEPATEPASEPAPEPATE 100
Query: 147 ARGKPLLLSAPGGQEDPAPEI---PSSAPA---APSSAPR-TPDPAPEKPSESSAGPSTE 199
+P AP +PA E P+ PA P AP TP+ APE E + P TE
Sbjct: 101 PAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPEVAPELAPEPTPEPVTE 160
Score = 33.5 bits (75), Expect = 0.27
Identities = 44/160 (27%), Positives = 59/160 (36%), Gaps = 14/160 (8%)
Query: 144 PTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGP---STEE 200
P Q +P P P P P+ PA P + +P+P PE E + GP +T E
Sbjct: 13 PPQDGEQPAESPEPPPPWPPPPPPPAPPPAPPLLSEASPEPIPEPCPELAPGPCPEATSE 72
Query: 201 DFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHMTETY 260
+ + ++ S +PE A PE P P T T
Sbjct: 73 SATELYTEPTPEPATEPASEPAPE--PATEPAPEPATEPAPEPAP-EPATESAPEPTPEP 129
Query: 261 LRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETP-PATEKA 299
+ P+P P L P + A APE TP P TE A
Sbjct: 130 ALESVPEPAP---ELTP----EVAPELAPEPTPEPVTELA 162
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 41.2 bits (95), Expect = 0.001
Identities = 45/157 (28%), Positives = 62/157 (39%), Gaps = 22/157 (14%)
Query: 66 LQQLKGRVAREAIQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQV 125
LQQ K ++ +E + EA P +E A ++G EE + A + V
Sbjct: 666 LQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATV 725
Query: 126 LTIAATEPVTLLHS-----------KPPKPTQARGKPLLLSAPGGQEDPAPEIPSSA--- 171
+ TE + H+ KPP A G P P ++ PAP P+ A
Sbjct: 726 NNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEA 785
Query: 172 -------PAAPS-SAPRTPDPAPEKPSESSAGPSTEE 200
PA PS SAP P EK E++A P EE
Sbjct: 786 TGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEE 822
Score = 32.0 bits (71), Expect = 0.79
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 134 VTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESS 193
VT +H +PP+ A KP AP ++ PE S AP P S+PR +P P++
Sbjct: 961 VTKVH-EPPREDAAPTKPAP-PAPPPPQNLQPE--SDAPQQPGSSPRGKSRSPAPPADKE 1016
Query: 194 A-GPSTEEDFAVDFEKI 209
A P FA + +K+
Sbjct: 1017 AEKPVFFPAFAAEAQKL 1033
Score = 29.3 bits (64), Expect = 5.2
Identities = 42/175 (24%), Positives = 64/175 (36%), Gaps = 31/175 (17%)
Query: 139 SKPPKPTQARGKPLLLSAPGGQEDPAPEIPS-------SAPAAPSSAPRTPDPAPEKPSE 191
+KPP AR S+P +P P +P + A + AP P P P
Sbjct: 1952 AKPP----ARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPA 2007
Query: 192 SSAGPSTEEDFA-------VDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEEL 244
S++ P E+ + ++ + + SS S G P + ++ D LP+ L
Sbjct: 2008 SASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHD--KGLPKHL 2065
Query: 245 PLLPCTALVEHMTETYLRLTAPQPIPAGGS------LGPAAEGDGAGSKAPEETP 293
L + L E LR P P+ GG L P E + S + P
Sbjct: 2066 EELDKSHL-----EGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAP 2115
Score = 28.9 bits (63), Expect = 6.7
Identities = 32/138 (23%), Positives = 49/138 (35%), Gaps = 16/138 (11%)
Query: 171 APAAPSSAPRTPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAES 230
APAA S P ++ E+S EE+ + E ++V+ S + + + +
Sbjct: 686 APAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAE------ATVNNSSDTESIPSPHT 739
Query: 231 AVVLDLLMSLPEELPLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGA-----G 285
D + P+ P L P+ IPA PA+E GA
Sbjct: 740 EAAKDTGQNGPK-----PPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPA 794
Query: 286 SKAPEETPPATEKAEHSE 303
+P PP K E E
Sbjct: 795 PPSPSAPPPVVPKEEKEE 812
>gi|10047086 mitogen-inducible gene 6 protein [Homo sapiens]
Length = 462
Score = 40.8 bits (94), Expect = 0.002
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 140 KPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTE 199
+P KP R + S+ ED P++P P +PS++ RTP P PS +
Sbjct: 292 RPVKPDYRRWSAEVTSSTYSDEDRPPKVPPREPLSPSNS-RTPSP-KSLPSYLNGVMPPT 349
Query: 200 EDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMS-----------LPEELPLLP 248
+ FA D KY+SS + ++ E SA++ +L ++ + LPE P L
Sbjct: 350 QSFAPD----PKYVSSKALQRQNSEGSASKVPCILPIIENGKKVSSTHYYLLPERPPYLD 405
Query: 249 CTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSK 287
E QP+PA + A E + +K
Sbjct: 406 KYEKFFREAEETNGGAQIQPLPADCGISSATEKPDSKTK 444
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 40.8 bits (94), Expect = 0.002
Identities = 52/203 (25%), Positives = 79/203 (38%), Gaps = 18/203 (8%)
Query: 27 REKRQLVRLLQARQGQPEPDATELAREL-RGRSEAEIRVFLQQL-KGRVAREAIQKVHPG 84
R++R+ L+ ++ + E L R R E + R L++L + R RE +++
Sbjct: 195 RQERERQERLERQERLERQERLERQERLDRERQERQERERLERLERERQERERQEQLERE 254
Query: 85 GLQGPR-RREAQPPAPIEVWTDLAEKI--TGPLEEALAVAFSQVLTIAATEPVTLLHSKP 141
L+ R RR + AP V T L + + E L A SQ + + + L P
Sbjct: 255 QLEWERERRISSAAAPASVETPLNSVLGDSSASEPGLQAA-SQPAETPSQQGIVLGPLAP 313
Query: 142 PKPTQARGKPLLLSA---PGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPST 198
P P P S P P P +PS+ P P P P+ P P A P
Sbjct: 314 PPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 373
Query: 199 EEDFAVDFEKIYKYLSSVSRSGR 221
F +L+S+S R
Sbjct: 374 ASGF---------FLASMSEDNR 387
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 40.8 bits (94), Expect = 0.002
Identities = 52/203 (25%), Positives = 79/203 (38%), Gaps = 18/203 (8%)
Query: 27 REKRQLVRLLQARQGQPEPDATELAREL-RGRSEAEIRVFLQQL-KGRVAREAIQKVHPG 84
R++R+ L+ ++ + E L R R E + R L++L + R RE +++
Sbjct: 195 RQERERQERLERQERLERQERLERQERLDRERQERQERERLERLERERQERERQEQLERE 254
Query: 85 GLQGPR-RREAQPPAPIEVWTDLAEKI--TGPLEEALAVAFSQVLTIAATEPVTLLHSKP 141
L+ R RR + AP V T L + + E L A SQ + + + L P
Sbjct: 255 QLEWERERRISSAAAPASVETPLNSVLGDSSASEPGLQAA-SQPAETPSQQGIVLGPLAP 313
Query: 142 PKPTQARGKPLLLSA---PGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPST 198
P P P S P P P +PS+ P P P P+ P P A P
Sbjct: 314 PPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 373
Query: 199 EEDFAVDFEKIYKYLSSVSRSGR 221
F +L+S+S R
Sbjct: 374 ASGF---------FLASMSEDNR 387
>gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens]
Length = 768
Score = 40.8 bits (94), Expect = 0.002
Identities = 48/165 (29%), Positives = 65/165 (39%), Gaps = 23/165 (13%)
Query: 43 PEPDATELARELRG-RSEAEIRVFLQQLKGRVAREAIQKVHPGGLQGPRRREAQPPAPIE 101
P P T REL R E E + + ARE +K P P P PI+
Sbjct: 592 PNPFTTLTDRELEEYRREVERKQKGSEENLDEAREQKEKSPP---DQPAVPHPPPSTPIK 648
Query: 102 VWTDLA-EKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQ 160
+ DL E TG +A AT TL P +P++A G P+L +
Sbjct: 649 LEEDLVPEPTTGDDSDA------------ATFKPTLPDLSPDEPSEALGFPML------E 690
Query: 161 EDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTEEDFAVD 205
++ P S AP+ A P P P +E +A + EE A D
Sbjct: 691 KEEEAHRPPSPTEAPTEASPEPAPDPAPVAEEAAPSAVEEGAAAD 735
Score = 29.6 bits (65), Expect = 3.9
Identities = 33/139 (23%), Positives = 45/139 (32%), Gaps = 15/139 (10%)
Query: 159 GQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSR 218
G E+ E +P P P P P P + E D + + +
Sbjct: 616 GSEENLDEAREQKEKSPPDQPAVPHPPPSTPIKLEEDLVPEPTTGDDSD-------AATF 668
Query: 219 SGRSPELSAAESAVVLDLLMSLPEE---LPLLPCTALVEHMTETYLRLTAPQPIPAGGSL 275
P+LS E + L M EE P P A E E AP P P
Sbjct: 669 KPTLPDLSPDEPSEALGFPMLEKEEEAHRPPSPTEAPTEASPEP-----APDPAPVAEEA 723
Query: 276 GPAAEGDGAGSKAPEETPP 294
P+A +GA + + P
Sbjct: 724 APSAVEEGAAADPGSDGSP 742
>gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens]
Length = 737
Score = 40.8 bits (94), Expect = 0.002
Identities = 48/165 (29%), Positives = 65/165 (39%), Gaps = 23/165 (13%)
Query: 43 PEPDATELARELRG-RSEAEIRVFLQQLKGRVAREAIQKVHPGGLQGPRRREAQPPAPIE 101
P P T REL R E E + + ARE +K P P P PI+
Sbjct: 561 PNPFTTLTDRELEEYRREVERKQKGSEENLDEAREQKEKSPP---DQPAVPHPPPSTPIK 617
Query: 102 VWTDLA-EKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQ 160
+ DL E TG +A AT TL P +P++A G P+L +
Sbjct: 618 LEEDLVPEPTTGDDSDA------------ATFKPTLPDLSPDEPSEALGFPML------E 659
Query: 161 EDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTEEDFAVD 205
++ P S AP+ A P P P +E +A + EE A D
Sbjct: 660 KEEEAHRPPSPTEAPTEASPEPAPDPAPVAEEAAPSAVEEGAAAD 704
Score = 29.6 bits (65), Expect = 3.9
Identities = 33/139 (23%), Positives = 45/139 (32%), Gaps = 15/139 (10%)
Query: 159 GQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSR 218
G E+ E +P P P P P P + E D + + +
Sbjct: 585 GSEENLDEAREQKEKSPPDQPAVPHPPPSTPIKLEEDLVPEPTTGDDSD-------AATF 637
Query: 219 SGRSPELSAAESAVVLDLLMSLPEE---LPLLPCTALVEHMTETYLRLTAPQPIPAGGSL 275
P+LS E + L M EE P P A E E AP P P
Sbjct: 638 KPTLPDLSPDEPSEALGFPMLEKEEEAHRPPSPTEAPTEASPEP-----APDPAPVAEEA 692
Query: 276 GPAAEGDGAGSKAPEETPP 294
P+A +GA + + P
Sbjct: 693 APSAVEEGAAADPGSDGSP 711
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 40.8 bits (94), Expect = 0.002
Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 22/131 (16%)
Query: 85 GLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAV-------------AFSQVLTIA-A 130
G Q PRR + PAP+ L E L L++ +F+ + + A
Sbjct: 380 GPQTPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTPGPSHSDGSFNLLGSDAHL 439
Query: 131 TEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSS-APAAPSSAPRTPDPAPEKP 189
P TL PP+P P+ S PG +P + AP A S AP P P + P
Sbjct: 440 PPPPTLSSGSPPQPRH----PIQPSLPGTTSGSLSSVPGAPAPPAASKAPVVPSPVLQSP 495
Query: 190 SES---SAGPS 197
SE AGP+
Sbjct: 496 SEGLGMGAGPA 506
Score = 33.5 bits (75), Expect = 0.27
Identities = 50/188 (26%), Positives = 65/188 (34%), Gaps = 15/188 (7%)
Query: 139 SKPPKPTQARGKPLLLSAPGGQEDP--APEIPSSAPAAPSSAPRTPDPA---PEKPSESS 193
S PP+P L+ PGG P A +PS ++P PR P+ P P+ S
Sbjct: 163 SLPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSGGSSSPRFLPRGNAPSPAPPPPPAISL 222
Query: 194 AGPSTEEDFAVDFEKIYKYLSS------VSRSGRSPELSAAESAVVLDLLMSLPEELPLL 247
PS A+ + L S S P L A+ L LP
Sbjct: 223 NAPSYNWGAALRSSLVPSDLGSPPAPHASSSPPSDPPLFHCSDALTPPPLPP-SNNLPAH 281
Query: 248 PCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPPATEKAEHSELKSP 307
P A ++ + L P GG+ P EG GA A KA+H L P
Sbjct: 282 PGPASQPPVSSATMHLPLVLG-PLGGA--PTVEGPGAPPFLASSLLSAAAKAQHPPLPPP 338
Query: 308 WQAAGICP 315
G P
Sbjct: 339 STLQGRRP 346
Score = 32.0 bits (71), Expect = 0.79
Identities = 52/227 (22%), Positives = 74/227 (32%), Gaps = 64/227 (28%)
Query: 115 EEALAVAFSQVLTIAATEPVTL-LHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPA 173
E+ LA++ + + P+ L L PP P +L+ GGQ P P +P
Sbjct: 524 EQGLALSGAGFPGMLGALPLPLSLGQPPPSPLLNHSLFGVLTGGGGQPPPEPLLPPPGGP 583
Query: 174 APSSAPRTPD------------------PAPEKP------------------------SE 191
P AP P+ P P P +E
Sbjct: 584 GPPLAPGEPEGPSLLVASLLPPPPSDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSAE 643
Query: 192 SSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTA 251
+ GPS E F + + +P A ++ +L + P P PC
Sbjct: 644 GAGGPSGE-----PFSGLGDLSPLLFPPLSAPPTLIALNSALLAATLDPPSGTPPQPCV- 697
Query: 252 LVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGS--KAPEET--PP 294
L+APQP P S+ A GA S KAP + PP
Sbjct: 698 -----------LSAPQPGPPTSSVTTATTDPGASSLGKAPSNSGRPP 733
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 40.8 bits (94), Expect = 0.002
Identities = 52/224 (23%), Positives = 75/224 (33%), Gaps = 45/224 (20%)
Query: 31 QLVRLLQARQGQPEPDATELARELRGRSEAEIRVFLQQLKGRVAREAIQKVHPGGLQGPR 90
++ R+++ R G PEP+ T E + A +RV KG ++ +V P
Sbjct: 53 RICRMVRRRHG-PEPERTRAELEKLIQQRAVLRV---SYKGSISYRNAARVQPP------ 102
Query: 91 RREAQPPAPIEVW--------------TDLAEKITGPLEEALAVAFSQVLTIAATEPVTL 136
RR A PPAP T P+ A + AAT P +
Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSP 162
Query: 137 LHSKPPKPTQARGKPLLLSAPGGQEDPA--------------------PEIPSSAPAAPS 176
++P P R PL P PA P P P AP
Sbjct: 163 GPAQPG-PRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPP 221
Query: 177 SAPRTPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSG 220
+ P P P+ P E A + V ++ +YL +G
Sbjct: 222 QQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAG 265
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 40.4 bits (93), Expect = 0.002
Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 27/170 (15%)
Query: 141 PPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSES----SAGP 196
PP Q + +P P Q P P++P P + P+TP PAP+ P ++ + GP
Sbjct: 402 PPPKLQPQPQP----QPQPQSQPQPQLPPQ----PQTQPQTPTPAPQHPQQTWPPVNEGP 453
Query: 197 STEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHM 256
+I L+ V +G E A L +LP E +P +E +
Sbjct: 454 PKPPTELEPEPEIEGLLTPVLEAGDVDEGPVARPLSPTRLQPALPPEAQSVP---ELEEV 510
Query: 257 TETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPPATEKAEHSELKS 306
+ P+P+ GS+ +AP P T K ++ ++ S
Sbjct: 511 ARVLAEI--PRPLKRRGSM----------EQAPAVALPPTHKKQYQQIIS 548
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 40.4 bits (93), Expect = 0.002
Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 27/170 (15%)
Query: 141 PPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSES----SAGP 196
PP Q + +P P Q P P++P P + P+TP PAP+ P ++ + GP
Sbjct: 402 PPPKLQPQPQP----QPQPQSQPQPQLPPQ----PQTQPQTPTPAPQHPQQTWPPVNEGP 453
Query: 197 STEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHM 256
+I L+ V +G E A L +LP E +P +E +
Sbjct: 454 PKPPTELEPEPEIEGLLTPVLEAGDVDEGPVARPLSPTRLQPALPPEAQSVP---ELEEV 510
Query: 257 TETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPPATEKAEHSELKS 306
+ P+P+ GS+ +AP P T K ++ ++ S
Sbjct: 511 ARVLAEI--PRPLKRRGSM----------EQAPAVALPPTHKKQYQQIIS 548
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 40.4 bits (93), Expect = 0.002
Identities = 65/250 (26%), Positives = 88/250 (35%), Gaps = 43/250 (17%)
Query: 75 REAIQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIA-ATEP 133
+ A +++ P + P PAP T T P E A T T P
Sbjct: 593 KPAPKELAPTTTKEPTSTTCDKPAPT---TPKGTAPTTPKEPAPTTPKEPAPTTPKGTAP 649
Query: 134 VTLLHSKPPKPTQARGKPLLLSAPGG-----QEDPAPEIPS-SAPAAPSS---------A 178
TL P P + K L + G + PAP P +AP P A
Sbjct: 650 TTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPA 709
Query: 179 PRTPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLM 238
P TP+ P SE S +T+E + S +PELSA + L+
Sbjct: 710 PTTPETPPPTTSEVSTPTTTKEPTTI----------HKSPDESTPELSAEPTPKALE--- 756
Query: 239 SLPEELPLLPCT----ALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPP 294
+ P+E P +P T A MT T T + L E A K +ET
Sbjct: 757 NSPKE-PGVPTTKTPAATKPEMTTTAKDKTTER------DLRTTPETTTAAPKMTKETAT 809
Query: 295 ATEKAEHSEL 304
TEK S++
Sbjct: 810 TTEKTTESKI 819
Score = 37.4 bits (85), Expect = 0.019
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 89 PRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQAR 148
P + P P T + T P E A S T P T +K P PT +
Sbjct: 224 PASTTPKEPTP----TTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTT---TKEPAPTTPK 276
Query: 149 GKPLLLSAPGGQEDPAPEIPSSAPAAPSS-APRTP-DPAPEKPSESSAGPSTEED 201
AP ++PAP SAP P AP TP PAP P E + P+T ++
Sbjct: 277 EP-----APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA--PTTPKE 324
Score = 37.4 bits (85), Expect = 0.019
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 128 IAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSS-APAAP-SSAPRTP-DP 184
+ T P L + P KP + L AP E+P P P AP P ++AP TP +P
Sbjct: 490 LTPTTPEKLAPTTPEKPAPTTPEEL---APTTPEEPTPTTPEEPAPTTPKAAAPNTPKEP 546
Query: 185 APEKPSESSAGPSTEED 201
AP P E + P+T ++
Sbjct: 547 APTTPKEPA--PTTPKE 561
Score = 37.0 bits (84), Expect = 0.025
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 26/123 (21%)
Query: 92 REAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKP 151
+E P P E +K+T E LA + A T P L + P +PT
Sbjct: 472 KEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE--KPAPTTPEELAPTTPEEPT------ 523
Query: 152 LLLSAPGGQEDPAPEIPSSA---------PAAPSS-APRTP-DPAPEKPSESSAGPSTEE 200
P E+PAP P +A P P AP TP +PAP P E++ P+T +
Sbjct: 524 -----PTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETA--PTTPK 576
Query: 201 DFA 203
A
Sbjct: 577 GTA 579
Score = 36.2 bits (82), Expect = 0.042
Identities = 44/177 (24%), Positives = 62/177 (35%), Gaps = 28/177 (15%)
Query: 140 KPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPS--SAPRTPDPAPEKPSE------ 191
K P PT + SAP ++PAP SAP P S T +PAP P E
Sbjct: 386 KEPAPTTTK------SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTP 439
Query: 192 SSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAES------AVVLDLLMSLPEEL- 244
P+T ++ A K ++ + +P+ A + L + PE+L
Sbjct: 440 KKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLA 499
Query: 245 ---PLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPPATEK 298
P P E + T T +P P A P+E P T K
Sbjct: 500 PTTPEKPAPTTPEELAPT----TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 552
Score = 35.4 bits (80), Expect = 0.072
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 132 EPVTLLHSKPPKPTQARGKPLLL-SAPGGQEDPAPEIPSSAPAAPSS-AP-RTPDPAPEK 188
EP +P T P + SAP ++PAP SAP P AP T +PAP
Sbjct: 215 EPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTT 274
Query: 189 PSESSAGPSTEED 201
P E + P+T ++
Sbjct: 275 PKEPA--PTTTKE 285
Score = 35.0 bits (79), Expect = 0.094
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 11/65 (16%)
Query: 139 SKPPKPTQARGKPLLLSAPGGQEDPAPEIPSS-APAAPSS-APRTP-DPAPEKPSESSAG 195
+K P PT + SAP ++PAP P AP P AP TP +P P P E +
Sbjct: 283 TKEPAPTTTK------SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA-- 334
Query: 196 PSTEE 200
P+T+E
Sbjct: 335 PTTKE 339
Score = 34.7 bits (78), Expect = 0.12
Identities = 55/222 (24%), Positives = 75/222 (33%), Gaps = 19/222 (8%)
Query: 92 REAQPPAPIE-VWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGK 150
+E P P E T T E A S T P T P P +
Sbjct: 378 KEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPT 437
Query: 151 PLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTEEDFAVDFEKIY 210
AP ++PAP P AP++ T PAP P E + P+T ++ A K
Sbjct: 438 TPKKPAPTTPKEPAPTTPKE--PAPTT---TKKPAPTTPKEPA--PTTPKETAPTTPKKL 490
Query: 211 KYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHMTETYLRLTAP---- 266
+ + +PE A + +L + PEE P E T + AP
Sbjct: 491 TPTTPEKLAPTTPEKPAPTTPE--ELAPTTPEE----PTPTTPEEPAPTTPKAAAPNTPK 544
Query: 267 QPIPAGGSLGPAAEGDGAGSKAPEETPPATEK-AEHSELKSP 307
+P P P+ET P T K + LK P
Sbjct: 545 EPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 586
Score = 33.1 bits (74), Expect = 0.36
Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 4/93 (4%)
Query: 111 TGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSS 170
T P E A T + P T P P + AP ++P P P
Sbjct: 273 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKE 332
Query: 171 -APAAPSSAPRTP-DPAPEKPSESSAGPSTEED 201
AP AP TP +PAP P + + P+T ++
Sbjct: 333 PAPTTKEPAPTTPKEPAPTAPKKPA--PTTPKE 363
Score = 30.4 bits (67), Expect = 2.3
Identities = 43/189 (22%), Positives = 60/189 (31%), Gaps = 27/189 (14%)
Query: 132 EPVTLLHSKPPKPTQARGKPLLLS--APGGQEDPAPEIPSSAPAAPSS---------APR 180
EP KP T P P ++PAP AP P AP
Sbjct: 300 EPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPT 359
Query: 181 TP-DPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMS 239
TP +PAP P E + + E E S + + P + +SA +
Sbjct: 360 TPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSA------PT 413
Query: 240 LPEELPLLPCTALVEHMTETYLRLTAPQPIPAGGSL-GPAAEGDGAGSKAPEETPPATEK 298
P+E P + T T +P P P + A + E P T+K
Sbjct: 414 TPKE----PSPTTTKEPAPT----TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKK 465
Query: 299 AEHSELKSP 307
+ K P
Sbjct: 466 PAPTTPKEP 474
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 40.4 bits (93), Expect = 0.002
Identities = 65/250 (26%), Positives = 88/250 (35%), Gaps = 43/250 (17%)
Query: 75 REAIQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIA-ATEP 133
+ A +++ P + P PAP T T P E A T T P
Sbjct: 634 KPAPKELAPTTTKEPTSTTCDKPAPT---TPKGTAPTTPKEPAPTTPKEPAPTTPKGTAP 690
Query: 134 VTLLHSKPPKPTQARGKPLLLSAPGG-----QEDPAPEIPS-SAPAAPSS---------A 178
TL P P + K L + G + PAP P +AP P A
Sbjct: 691 TTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPA 750
Query: 179 PRTPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLM 238
P TP+ P SE S +T+E + S +PELSA + L+
Sbjct: 751 PTTPETPPPTTSEVSTPTTTKEPTTI----------HKSPDESTPELSAEPTPKALE--- 797
Query: 239 SLPEELPLLPCT----ALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPP 294
+ P+E P +P T A MT T T + L E A K +ET
Sbjct: 798 NSPKE-PGVPTTKTPAATKPEMTTTAKDKTTER------DLRTTPETTTAAPKMTKETAT 850
Query: 295 ATEKAEHSEL 304
TEK S++
Sbjct: 851 TTEKTTESKI 860
Score = 37.4 bits (85), Expect = 0.019
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 89 PRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQAR 148
P + P P T + T P E A S T P T +K P PT +
Sbjct: 265 PASTTPKEPTP----TTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTT---TKEPAPTTPK 317
Query: 149 GKPLLLSAPGGQEDPAPEIPSSAPAAPSS-APRTP-DPAPEKPSESSAGPSTEED 201
AP ++PAP SAP P AP TP PAP P E + P+T ++
Sbjct: 318 EP-----APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA--PTTPKE 365
Score = 37.4 bits (85), Expect = 0.019
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 128 IAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSS-APAAP-SSAPRTP-DP 184
+ T P L + P KP + L AP E+P P P AP P ++AP TP +P
Sbjct: 531 LTPTTPEKLAPTTPEKPAPTTPEEL---APTTPEEPTPTTPEEPAPTTPKAAAPNTPKEP 587
Query: 185 APEKPSESSAGPSTEED 201
AP P E + P+T ++
Sbjct: 588 APTTPKEPA--PTTPKE 602
Score = 37.0 bits (84), Expect = 0.025
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 26/123 (21%)
Query: 92 REAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKP 151
+E P P E +K+T E LA + A T P L + P +PT
Sbjct: 513 KEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE--KPAPTTPEELAPTTPEEPT------ 564
Query: 152 LLLSAPGGQEDPAPEIPSSA---------PAAPSS-APRTP-DPAPEKPSESSAGPSTEE 200
P E+PAP P +A P P AP TP +PAP P E++ P+T +
Sbjct: 565 -----PTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETA--PTTPK 617
Query: 201 DFA 203
A
Sbjct: 618 GTA 620
Score = 36.2 bits (82), Expect = 0.042
Identities = 44/177 (24%), Positives = 62/177 (35%), Gaps = 28/177 (15%)
Query: 140 KPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPS--SAPRTPDPAPEKPSE------ 191
K P PT + SAP ++PAP SAP P S T +PAP P E
Sbjct: 427 KEPAPTTTK------SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTP 480
Query: 192 SSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAES------AVVLDLLMSLPEEL- 244
P+T ++ A K ++ + +P+ A + L + PE+L
Sbjct: 481 KKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLA 540
Query: 245 ---PLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPPATEK 298
P P E + T T +P P A P+E P T K
Sbjct: 541 PTTPEKPAPTTPEELAPT----TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 593
Score = 35.4 bits (80), Expect = 0.072
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 132 EPVTLLHSKPPKPTQARGKPLLL-SAPGGQEDPAPEIPSSAPAAPSS-AP-RTPDPAPEK 188
EP +P T P + SAP ++PAP SAP P AP T +PAP
Sbjct: 256 EPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTT 315
Query: 189 PSESSAGPSTEED 201
P E + P+T ++
Sbjct: 316 PKEPA--PTTTKE 326
Score = 35.0 bits (79), Expect = 0.094
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 11/65 (16%)
Query: 139 SKPPKPTQARGKPLLLSAPGGQEDPAPEIPSS-APAAPSS-APRTP-DPAPEKPSESSAG 195
+K P PT + SAP ++PAP P AP P AP TP +P P P E +
Sbjct: 324 TKEPAPTTTK------SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA-- 375
Query: 196 PSTEE 200
P+T+E
Sbjct: 376 PTTKE 380
Score = 34.7 bits (78), Expect = 0.12
Identities = 55/222 (24%), Positives = 75/222 (33%), Gaps = 19/222 (8%)
Query: 92 REAQPPAPIE-VWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGK 150
+E P P E T T E A S T P T P P +
Sbjct: 419 KEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPT 478
Query: 151 PLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTEEDFAVDFEKIY 210
AP ++PAP P AP++ T PAP P E + P+T ++ A K
Sbjct: 479 TPKKPAPTTPKEPAPTTPKE--PAPTT---TKKPAPTTPKEPA--PTTPKETAPTTPKKL 531
Query: 211 KYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHMTETYLRLTAP---- 266
+ + +PE A + +L + PEE P E T + AP
Sbjct: 532 TPTTPEKLAPTTPEKPAPTTPE--ELAPTTPEE----PTPTTPEEPAPTTPKAAAPNTPK 585
Query: 267 QPIPAGGSLGPAAEGDGAGSKAPEETPPATEK-AEHSELKSP 307
+P P P+ET P T K + LK P
Sbjct: 586 EPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 627
Score = 33.1 bits (74), Expect = 0.36
Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 4/93 (4%)
Query: 111 TGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSS 170
T P E A T + P T P P + AP ++P P P
Sbjct: 314 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKE 373
Query: 171 -APAAPSSAPRTP-DPAPEKPSESSAGPSTEED 201
AP AP TP +PAP P + + P+T ++
Sbjct: 374 PAPTTKEPAPTTPKEPAPTAPKKPA--PTTPKE 404
Score = 30.4 bits (67), Expect = 2.3
Identities = 43/189 (22%), Positives = 60/189 (31%), Gaps = 27/189 (14%)
Query: 132 EPVTLLHSKPPKPTQARGKPLLLS--APGGQEDPAPEIPSSAPAAPSS---------APR 180
EP KP T P P ++PAP AP P AP
Sbjct: 341 EPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPT 400
Query: 181 TP-DPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMS 239
TP +PAP P E + + E E S + + P + +SA +
Sbjct: 401 TPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSA------PT 454
Query: 240 LPEELPLLPCTALVEHMTETYLRLTAPQPIPAGGSL-GPAAEGDGAGSKAPEETPPATEK 298
P+E P + T T +P P P + A + E P T+K
Sbjct: 455 TPKE----PSPTTTKEPAPT----TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKK 506
Query: 299 AEHSELKSP 307
+ K P
Sbjct: 507 PAPTTPKEP 515
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,216,860
Number of Sequences: 37866
Number of extensions: 1041646
Number of successful extensions: 12259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 796
Number of HSP's that attempted gapping in prelim test: 8291
Number of HSP's gapped (non-prelim): 3704
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.