Guide to the Human Genome
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Name: ERRFI1 Sequence: fasta or formatted (462aa) NCBI GI: 10047086
Description:

mitogen-inducible gene 6 protein

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         27           2
 C cysteine            2.4         11           2
 D aspartate           5.2         24           2
 E glutamate           5.4         25           2
 F phenylalanine       3.2         15           2
 G glycine             5.6         26           2
 H histidine           2.2         10           1
 I isoleucine          3.9         18           2
 K lysine              5.6         26           2
 L leucine             7.6         35           2
 M methionine          1.5          7           1
 N asparagine          4.8         22           2
 P proline            13.2         61           4
 Q glutamine           2.6         12           1
 R arginine            5.8         27           2
 S serine             12.1         56           2
 T threonine           4.3         20           1
 V valine              5.0         23           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.2         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-inducible gene 6 protein 
TNK2                  0.162   tyrosine kinase, non-receptor, 2 isoform 1 
TNK2                  0.162   tyrosine kinase, non-receptor, 2 isoform 2 
RBM33                 0.020   RNA binding motif protein 33 
ZBTB45                0.020   zinc finger and BTB domain containing 45 
SOS1                  0.020   son of sevenless homolog 1 
WIPF3                 0.019   WAS/WASL interacting protein family, member 3 [Homo...
SOS2                  0.018   son of sevenless homolog 2 
ATXN2                 0.018   ataxin 2 
SRRM1                 0.018   serine/arginine repetitive matrix 1 
ZFHX4                 0.018   zinc finger homeodomain 4 
FGD1                  0.017   faciogenital dysplasia protein 
RNF111                0.017   ring finger protein 111 
ABI3BP                0.017   ABI gene family, member 3 (NESH) binding protein [Ho...
SNAPC2                0.017   small nuclear RNA activating complex, polypeptide 2, ...
C6orf132              0.016   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.016   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.016   PREDICTED: hypothetical protein LOC647024 
RAPH1                 0.016   Ras association and pleckstrin homology domains 1 is...
PRR12                 0.016   proline rich 12 
SYT17                 0.015   B/K protein 
ITIH5L                0.015   inter-alpha (globulin) inhibitor H5-like 
LOC100134663          0.015   PREDICTED: hypothetical protein, partial 
YLPM1                 0.015   YLP motif containing 1 
POLR2A                0.014   DNA-directed RNA polymerase II A 
DTX1                  0.014   deltex homolog 1 
MUC2                  0.014   mucin 2 precursor 
SALL1                 0.014   sal-like 1 isoform b 
SALL1                 0.014   sal-like 1 isoform a 
MED15                 0.014   mediator complex subunit 15 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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