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Search of human proteins with 4506407
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506407 RAN binding protein 1 [Homo sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506407 RAN binding protein 1 [Homo sapiens] 411 e-115
gi|169216167 PREDICTED: similar to RAN binding protein 1 [Homo s... 398 e-111
gi|169216776 PREDICTED: similar to RAN binding protein 1 [Homo s... 398 e-111
gi|239757769 PREDICTED: similar to RAN binding protein 1 [Homo s... 277 5e-75
gi|150418007 RAN binding protein 2 [Homo sapiens] 175 2e-44
gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8... 142 2e-34
gi|83267877 RANBP2-like and GRIP domain containing 5 isoform 1 [... 142 2e-34
gi|182765478 RANBP2-like and GRIP domain containing 6 [Homo sapi... 142 2e-34
gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapi... 141 3e-34
gi|157266273 RANBP2-like and GRIP domain containing 1 [Homo sapi... 140 6e-34
gi|118200331 RANBP2-like and GRIP domain containing 2 [Homo sapi... 140 6e-34
gi|211059431 RANBP2-like and GRIP domain containing 4 [Homo sapi... 137 5e-33
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 37 0.009
gi|194097489 RAN binding protein 3 isoform RANBP3-b [Homo sapiens] 36 0.025
gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens] 36 0.025
gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens] 36 0.025
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 35 0.056
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 35 0.056
gi|239582745 RAN binding protein 3-like isoform 1 [Homo sapiens] 34 0.096
gi|239582743 RAN binding protein 3-like isoform 2 [Homo sapiens] 34 0.096
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 34 0.096
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 34 0.096
gi|190194423 SPARC-like 1 [Homo sapiens] 33 0.12
gi|190341024 SPARC-like 1 [Homo sapiens] 33 0.12
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 33 0.16
gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ... 33 0.21
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 33 0.21
gi|34878777 ring finger protein 20 [Homo sapiens] 33 0.21
gi|16262452 cingulin [Homo sapiens] 32 0.28
gi|154426331 early undifferentiated retina and lens isoform 1 [H... 32 0.28
>gi|4506407 RAN binding protein 1 [Homo sapiens]
Length = 201
Score = 411 bits (1057), Expect = e-115
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60
MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
Sbjct: 1 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60
Query: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120
ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120
Query: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
Sbjct: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
Query: 181 AEKLEALSVKEETKEDAEEKQ 201
AEKLEALSVKEETKEDAEEKQ
Sbjct: 181 AEKLEALSVKEETKEDAEEKQ 201
>gi|169216167 PREDICTED: similar to RAN binding protein 1 [Homo
sapiens]
Length = 201
Score = 398 bits (1023), Expect = e-111
Identities = 194/201 (96%), Positives = 196/201 (97%)
Query: 1 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60
MAA KDTHEDHDTSTENTDE NHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAK RFAS
Sbjct: 1 MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS 60
Query: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120
ENDLPEWKERGTGDVKLLKHKEKGAIRLLM+RDKTLKICANHY TPMMELKPNAGSDRAW
Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW 120
Query: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
Sbjct: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
Query: 181 AEKLEALSVKEETKEDAEEKQ 201
AEKLEALSVKE+TKEDAEEKQ
Sbjct: 181 AEKLEALSVKEDTKEDAEEKQ 201
>gi|169216776 PREDICTED: similar to RAN binding protein 1 [Homo
sapiens]
Length = 201
Score = 398 bits (1023), Expect = e-111
Identities = 194/201 (96%), Positives = 196/201 (97%)
Query: 1 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60
MAA KDTHEDHDTSTENTDE NHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAK RFAS
Sbjct: 1 MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS 60
Query: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120
ENDLPEWKERGTGDVKLLKHKEKGAIRLLM+RDKTLKICANHY TPMMELKPNAGSDRAW
Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW 120
Query: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
Sbjct: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
Query: 181 AEKLEALSVKEETKEDAEEKQ 201
AEKLEALSVKE+TKEDAEEKQ
Sbjct: 181 AEKLEALSVKEDTKEDAEEKQ 201
>gi|239757769 PREDICTED: similar to RAN binding protein 1 [Homo
sapiens]
Length = 178
Score = 277 bits (708), Expect = 5e-75
Identities = 138/173 (79%), Positives = 145/173 (83%), Gaps = 9/173 (5%)
Query: 1 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60
MAA KDTHEDHDTSTENTDE NHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAK RFAS
Sbjct: 1 MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS 60
Query: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120
ENDLPEWKERGTGDVKLLKHKEKGAIRLLM+RDKTLKICANHY TPMMELKPNAGSDRAW
Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW 120
Query: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEEC----RKEIEEREKKA 169
VWNTHADFADECPKPEL A A + + K C + ++ E E+ A
Sbjct: 121 VWNTHADFADECPKPELRV-----AAVALELQAKLSNCNGDPQWQLSENERLA 168
>gi|150418007 RAN binding protein 2 [Homo sapiens]
Length = 3224
Score = 175 bits (444), Expect = 2e-44
Identities = 98/198 (49%), Positives = 128/198 (64%), Gaps = 6/198 (3%)
Query: 1 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFA 59
+ A HE D + + D+ + P FEP+V LP++ E+KT EEDEEE F RAKLFRF
Sbjct: 1147 LETANKNHET-DGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFD 1205
Query: 60 SENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRA 119
E+ EWKERG G+VK+L+HK G IRLLMRR++ LKICANHYI+P M+L PNAGSDR+
Sbjct: 1206 VESK--EWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRS 1263
Query: 120 WVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEK 179
+VW+ D+ADE PKPE LAIRF E A FK KFEE + ++ N A +
Sbjct: 1264 FVWHA-LDYADELPKPEQLAIRFKTPEEAALFKCKFEEAQSILKAPGTNVAMASN-QAVR 1321
Query: 180 VAEKLEALSVKEETKEDA 197
+ ++ + K+ K DA
Sbjct: 1322 IVKEPTSHDNKDICKSDA 1339
Score = 151 bits (381), Expect = 4e-37
Identities = 84/159 (52%), Positives = 105/159 (66%), Gaps = 4/159 (2%)
Query: 9 EDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWK 68
ED D S E N D FEPIVSLPE E+K+ EEDEE LFK RAKL+R+ + D+ +WK
Sbjct: 2895 EDEDGSDEEVVH-NEDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRW--DRDVSQWK 2951
Query: 69 ERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADF 128
ERG GD+K+L H K R+LMRRD+ K+CANH IT MELKP S+ A VW T +D+
Sbjct: 2952 ERGVGDIKILWHTMKNYYRILMRRDQVFKVCANHVITKTMELKPLNVSNNALVW-TASDY 3010
Query: 129 ADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREK 167
AD K E LA+RF E A FK FEEC++ + + +K
Sbjct: 3011 ADGEAKVEQLAVRFKTKEVADCFKKTFEECQQNLMKLQK 3049
Score = 146 bits (369), Expect = 1e-35
Identities = 78/157 (49%), Positives = 110/157 (70%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDESNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASEND 63
D +D D TE++D D FEP+V +PE+ E+ T EEDE+ L+ R KLFRF +E
Sbjct: 1995 DFEKDDDAYKTEDSD----DIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAE-- 2048
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G +R+LMRR++ LK+CANH+IT M LKP +GSDRAW+W
Sbjct: 2049 VSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMW- 2107
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 2108 LASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQR 2144
Score = 127 bits (318), Expect = 8e-30
Identities = 75/189 (39%), Positives = 114/189 (60%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDESNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKE 69
D ++ T E D Q FEP+V LP+ E+ + EE+E+ +F RAKL+R+ + D+ +WKE
Sbjct: 2294 DEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRY--DKDVGQWKE 2351
Query: 70 RGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++MRRD+ LK+CANH ITP M L+ G++R W+W T DFA
Sbjct: 2352 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQNMKGTERVWLW-TACDFA 2410
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 2411 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 2469
Query: 187 LSVKEETKE 195
++E T+E
Sbjct: 2470 AVLEETTRE 2478
>gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8
[Homo sapiens]
Length = 1765
Score = 142 bits (358), Expect = 2e-34
Identities = 76/157 (48%), Positives = 109/157 (69%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDESNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASEND 63
D +D D TE++D D FEP+V +PE+ E+ T EE E+ L+ KLFRF +E
Sbjct: 1019 DFEKDDDAYKTEDSD----DIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE-- 1072
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G +R+LMRR++ LK+CANH+IT M LKP +GSDRAW+W+
Sbjct: 1073 VRQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWS 1132
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 1133 A-SDFSDGDAKLERLAAKFKTPELAEEFKQKFEECQR 1168
Score = 124 bits (311), Expect = 5e-29
Identities = 67/155 (43%), Positives = 100/155 (64%), Gaps = 5/155 (3%)
Query: 12 DTSTENTDESNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKE 69
D + T E D Q FEP+V LP+ E+ + EE+E+ +F RA+++R+ + D+ +WKE
Sbjct: 1318 DEESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRY--DKDVGQWKE 1375
Query: 70 RGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++MRRD+ LK+CANH ITP M L+ G++R WVW T DFA
Sbjct: 1376 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 1434
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEE 164
D K E LA+RF + A FK F+E + E+
Sbjct: 1435 DGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEK 1469
>gi|83267877 RANBP2-like and GRIP domain containing 5 isoform 1 [Homo
sapiens]
Length = 1765
Score = 142 bits (358), Expect = 2e-34
Identities = 76/157 (48%), Positives = 109/157 (69%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDESNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASEND 63
D +D D TE++D D FEP+V +PE+ E+ T EE E+ L+ KLFRF +E
Sbjct: 1019 DFEKDDDAYKTEDSD----DIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE-- 1072
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G +R+LMRR++ LK+CANH+IT M LKP +GSDRAW+W+
Sbjct: 1073 VRQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWS 1132
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 1133 A-SDFSDGDAKLERLAAKFKTPELAEEFKQKFEECQR 1168
Score = 124 bits (312), Expect = 4e-29
Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDESNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKE 69
D + T E D Q FEP+V LP+ E+ + EE+E+ +F RA+++R+ + D+ +WKE
Sbjct: 1318 DEESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRY--DKDVGQWKE 1375
Query: 70 RGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++MRRD+ LK+CANH ITP M L+ G++R WVW T DFA
Sbjct: 1376 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 1434
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 1435 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 1493
Query: 187 LSVKEETKE 195
++E T+E
Sbjct: 1494 AILEETTRE 1502
>gi|182765478 RANBP2-like and GRIP domain containing 6 [Homo sapiens]
Length = 1765
Score = 142 bits (358), Expect = 2e-34
Identities = 76/157 (48%), Positives = 109/157 (69%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDESNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASEND 63
D +D D TE++D D FEP+V +PE+ E+ T EE E+ L+ KLFRF +E
Sbjct: 1019 DFEKDDDAYKTEDSD----DIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE-- 1072
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G +R+LMRR++ LK+CANH+IT M LKP +GSDRAW+W+
Sbjct: 1073 VRQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWS 1132
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 1133 A-SDFSDGDAKLERLAAKFKTPELAEEFKQKFEECQR 1168
Score = 124 bits (312), Expect = 4e-29
Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDESNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKE 69
D + T E D Q FEP+V LP+ E+ + EE+E+ +F RA+++R+ + D+ +WKE
Sbjct: 1318 DEESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRY--DKDVGQWKE 1375
Query: 70 RGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++MRRD+ LK+CANH ITP M L+ G++R WVW T DFA
Sbjct: 1376 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 1434
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 1435 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 1493
Query: 187 LSVKEETKE 195
++E T+E
Sbjct: 1494 AILEETTRE 1502
>gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapiens]
Length = 1758
Score = 141 bits (356), Expect = 3e-34
Identities = 75/157 (47%), Positives = 109/157 (69%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDESNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASEND 63
D +D D TE++D D FEP+V +PE+ E+ T EE E+ L+ KLFRF +E
Sbjct: 1020 DFEKDDDAYKTEDSD----DIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE-- 1073
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G +R+LM+R++ LK+CANH+IT M LKP +GSDRAW+W+
Sbjct: 1074 VSQWKERGLGNLKILKNEVNGKVRMLMQREQVLKVCANHWITTTMNLKPLSGSDRAWMWS 1133
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 1134 A-SDFSDGDAKLERLAAKFKTPELAEEFKQKFEECQR 1169
Score = 126 bits (316), Expect = 1e-29
Identities = 75/189 (39%), Positives = 113/189 (59%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDESNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKE 69
D ++ T E D Q FEP+V LP+ E+ + EE+E+ +F RA+ +R+ + D+ +WKE
Sbjct: 1319 DEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEFYRY--DKDVGQWKE 1376
Query: 70 RGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R+LMRRD+ LK+CANH ITP M L+ G++R WVW T DFA
Sbjct: 1377 RGIGDIKILQNYDNKHVRILMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 1435
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 1436 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 1494
Query: 187 LSVKEETKE 195
++E T+E
Sbjct: 1495 AVLEETTRE 1503
>gi|157266273 RANBP2-like and GRIP domain containing 1 [Homo sapiens]
Length = 1756
Score = 140 bits (354), Expect = 6e-34
Identities = 75/153 (49%), Positives = 105/153 (68%), Gaps = 8/153 (5%)
Query: 9 EDHDTSTENTDESNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEW 67
+D TE++D D FEP+V +PE+ E+ T EE E+ L+ KLFRF +E + +W
Sbjct: 1016 DDDACKTEDSD----DIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE--ISQW 1069
Query: 68 KERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHAD 127
KERG G++K+LK++ G R+LMRRD+ LK+CANH+IT M LKP +GSDRAW+W +D
Sbjct: 1070 KERGLGNLKILKNEVNGKPRMLMRRDQVLKVCANHWITTTMNLKPLSGSDRAWMW-LASD 1128
Query: 128 FADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
F+D K E LA +F E A++FK KFEEC++
Sbjct: 1129 FSDGDAKLERLAAQFKTPELAEEFKQKFEECQR 1161
Score = 127 bits (318), Expect = 8e-30
Identities = 75/189 (39%), Positives = 114/189 (60%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDESNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKE 69
D ++ T E D Q FEP+V LP+ E+ + EE+E+ +F RA+L+R+ + D+ +WKE
Sbjct: 1311 DEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAELYRY--DKDVGQWKE 1368
Query: 70 RGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++MRRD+ LK+CANH ITP M L+ G++R WVW T DFA
Sbjct: 1369 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 1427
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 1428 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 1486
Query: 187 LSVKEETKE 195
++E T+E
Sbjct: 1487 AVLEETTRE 1495
>gi|118200331 RANBP2-like and GRIP domain containing 2 [Homo
sapiens]
Length = 1013
Score = 140 bits (354), Expect = 6e-34
Identities = 75/153 (49%), Positives = 105/153 (68%), Gaps = 8/153 (5%)
Query: 9 EDHDTSTENTDESNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEW 67
+D TE++D D FEP+V +PE+ E+ T EE E+ L+ KLFRF +E + +W
Sbjct: 273 DDDACKTEDSD----DIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE--ISQW 326
Query: 68 KERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHAD 127
KERG G++K+LK++ G R+LMRRD+ LK+CANH+IT M LKP +GSDRAW+W +D
Sbjct: 327 KERGLGNLKILKNEVNGKPRMLMRRDQVLKVCANHWITTTMNLKPLSGSDRAWMW-LASD 385
Query: 128 FADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
F+D K E LA +F E A++FK KFEEC++
Sbjct: 386 FSDGDAKLERLAAQFKTPELAEEFKQKFEECQR 418
Score = 124 bits (312), Expect = 4e-29
Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDESNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKE 69
D ++ T E D Q FEP+V LP+ E+ + EE+E+ +F A+L+R+ + D+ +WKE
Sbjct: 568 DEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHMAELYRY--DKDVGQWKE 625
Query: 70 RGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++MRRD+ LK+CANH ITP M L+ G++R WVW T DFA
Sbjct: 626 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 684
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 685 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 743
Query: 187 LSVKEETKE 195
++E T+E
Sbjct: 744 AVLEETTRE 752
>gi|211059431 RANBP2-like and GRIP domain containing 4 [Homo sapiens]
Length = 1758
Score = 137 bits (346), Expect = 5e-33
Identities = 75/157 (47%), Positives = 107/157 (68%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDESNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASEND 63
D +D D TE++D D FEP+V +PE+ E+ EE E+ L+ KLFRF +E
Sbjct: 1020 DFEKDDDAYKTEDSD----DIHFEPVVQMPEKVELVIGEEGEKVLYSQGVKLFRFDAE-- 1073
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G R+LMRR++ LK+CANH+IT M LKP +GSDRAW+W+
Sbjct: 1074 VRQWKERGLGNLKILKNEVNGKPRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWS 1133
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 1134 A-SDFSDGDAKLERLAAKFKTPELAEEFKQKFEECQQ 1169
Score = 126 bits (317), Expect = 1e-29
Identities = 75/189 (39%), Positives = 114/189 (60%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDESNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKE 69
D ++ T E D Q FEP+V LP+ E+ + EE+E+ +F RA+L+R+ + D+ +WKE
Sbjct: 1319 DEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEKVVFSHRAELYRY--DKDVGQWKE 1376
Query: 70 RGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++MRRD+ LK+CANH ITP M L+ G++R WVW T DFA
Sbjct: 1377 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHTITPDMSLQNMKGTERVWVW-TACDFA 1435
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 1436 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 1494
Query: 187 LSVKEETKE 195
++E T+E
Sbjct: 1495 AVLEETTRE 1503
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 37.4 bits (85), Expect = 0.009
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 35 EQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDK 94
E++I+ LEE E K+R + + E + E ++R + K+ + +EK R++
Sbjct: 343 EEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEK-------IREQ 395
Query: 95 TLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTK 154
KI + E K ++ W +E + + IR E +K + +
Sbjct: 396 EEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIR----EQEKKIREQ 451
Query: 155 FEECRKE---IEEREKKAGSGKNDHAE---KVAEKLEALSVKEETKEDAEEK 200
E+ R++ ++E+E+K G + E K+ E+ E + +EE + E+K
Sbjct: 452 EEKIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKK 503
Score = 30.8 bits (68), Expect = 0.81
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 35 EQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDK 94
EQE + ++E EE++ + K++ E ++ E +E+ + ++ +EK R++
Sbjct: 401 EQE-EMMQEQEEKMGEQEEKMWE--QEEEMQEQEEKMRRQEEKIREQEKKI------REQ 451
Query: 95 TLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTK 154
KI + M E + G + A ++ E ++ + K
Sbjct: 452 EEKIREQEEM--MQEQEEKMGEQEGKMCEQEAKMQEQ-------------EEKMRRQEEK 496
Query: 155 FEECRKEIEEREKKAGSGKN---DHAEKVAEKLEALSVKEETKEDAEEK 200
E K+I E+E+K + + EK+ E+ E + +EE ++ EEK
Sbjct: 497 IREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEK 545
>gi|194097489 RAN binding protein 3 isoform RANBP3-b [Homo sapiens]
Length = 499
Score = 35.8 bits (81), Expect = 0.025
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 33 LPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKL--LKHKEKGAI--RL 88
L + E+ T EE E + +M+ KLF F + W ERG G ++L + + G + RL
Sbjct: 318 LEKVEVITGEEAESNVLQMQCKLFVFDKTSQ--SWVERGRGLLRLNDMASTDDGTLQSRL 375
Query: 89 LMRRDKTLKICANHYITPMMEL 110
+MR +L++ N + M++
Sbjct: 376 VMRTQGSLRLILNTKLWAQMQI 397
>gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]
Length = 562
Score = 35.8 bits (81), Expect = 0.025
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 33 LPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKL--LKHKEKGAI--RL 88
L + E+ T EE E + +M+ KLF F + W ERG G ++L + + G + RL
Sbjct: 381 LEKVEVITGEEAESNVLQMQCKLFVFDKTSQ--SWVERGRGLLRLNDMASTDDGTLQSRL 438
Query: 89 LMRRDKTLKICANHYITPMMEL 110
+MR +L++ N + M++
Sbjct: 439 VMRTQGSLRLILNTKLWAQMQI 460
>gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens]
Length = 567
Score = 35.8 bits (81), Expect = 0.025
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 33 LPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKL--LKHKEKGAI--RL 88
L + E+ T EE E + +M+ KLF F + W ERG G ++L + + G + RL
Sbjct: 386 LEKVEVITGEEAESNVLQMQCKLFVFDKTSQ--SWVERGRGLLRLNDMASTDDGTLQSRL 443
Query: 89 LMRRDKTLKICANHYITPMMEL 110
+MR +L++ N + M++
Sbjct: 444 VMRTQGSLRLILNTKLWAQMQI 465
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 34.7 bits (78), Expect = 0.056
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 28/209 (13%)
Query: 5 KDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDL 64
+D E+ E +E P+ I + EE+ K++AK R + D
Sbjct: 172 RDAEENKKEDKEKEEEEEEKPKRGSIGE---------NQGEEKGTKVQAK--REKLQEDK 220
Query: 65 PEWKERGTGDVKLLKHKE-KGAIRLLMRRDK---TLKICANHYITPMMELKPNAGSDRAW 120
P +K+ D K+ K KE K ++ M R K +K ++T ++ N S
Sbjct: 221 PTFKKEEIKDEKIKKDKEPKEEVKSFMDRKKGFTEVKSQNGEFMTHKLKHTENTFSRPGG 280
Query: 121 VWNTHADFADECPKPE----LLAIRF----LNAENAQKFKTKFEECRKEIEEREKKAGSG 172
+ A+ P+ E L +R +E +K K K +E E+EE +K
Sbjct: 281 RASVDTKEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKK----- 335
Query: 173 KNDHAEKVAEKLEALSVKEETKEDAEEKQ 201
K + KV E+ E +EE E++
Sbjct: 336 KREERRKVLEEEEQRRKQEEADRKLREEE 364
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 34.7 bits (78), Expect = 0.056
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 28/209 (13%)
Query: 5 KDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDL 64
+D E+ E +E P+ I + EE+ K++AK R + D
Sbjct: 178 RDAEENKKEDKEKEEEEEEKPKRGSIGE---------NQGEEKGTKVQAK--REKLQEDK 226
Query: 65 PEWKERGTGDVKLLKHKE-KGAIRLLMRRDK---TLKICANHYITPMMELKPNAGSDRAW 120
P +K+ D K+ K KE K ++ M R K +K ++T ++ N S
Sbjct: 227 PTFKKEEIKDEKIKKDKEPKEEVKSFMDRKKGFTEVKSQNGEFMTHKLKHTENTFSRPGG 286
Query: 121 VWNTHADFADECPKPE----LLAIRF----LNAENAQKFKTKFEECRKEIEEREKKAGSG 172
+ A+ P+ E L +R +E +K K K +E E+EE +K
Sbjct: 287 RASVDTKEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKK----- 341
Query: 173 KNDHAEKVAEKLEALSVKEETKEDAEEKQ 201
K + KV E+ E +EE E++
Sbjct: 342 KREERRKVLEEEEQRRKQEEADRKLREEE 370
>gi|239582745 RAN binding protein 3-like isoform 1 [Homo sapiens]
Length = 490
Score = 33.9 bits (76), Expect = 0.096
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 33 LPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKL--LKHKEKGAI--RL 88
L + ++ T EE E + K+ KLF F W ERG G ++L + G + RL
Sbjct: 309 LEKIDVITGEETEHNVLKINCKLFIF--NKTTQSWIERGRGTLRLNDTASTDCGTLQSRL 366
Query: 89 LMRRDKTLKICANHYITPMMELK 111
+MR +L++ N + M+++
Sbjct: 367 IMRNQGSLRLILNSKLWAQMKIQ 389
>gi|239582743 RAN binding protein 3-like isoform 2 [Homo sapiens]
Length = 465
Score = 33.9 bits (76), Expect = 0.096
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 33 LPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKL--LKHKEKGAI--RL 88
L + ++ T EE E + K+ KLF F W ERG G ++L + G + RL
Sbjct: 284 LEKIDVITGEETEHNVLKINCKLFIF--NKTTQSWIERGRGTLRLNDTASTDCGTLQSRL 341
Query: 89 LMRRDKTLKICANHYITPMMELK 111
+MR +L++ N + M+++
Sbjct: 342 IMRNQGSLRLILNSKLWAQMKIQ 364
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 33.9 bits (76), Expect = 0.096
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 146 ENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ 201
E +K KTK E RKE EE EKK + E+ E+ E +EE KE+ E+++
Sbjct: 39 EKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEE-EEREEEEEEEEEEKEEEEKEE 93
Score = 30.4 bits (67), Expect = 1.1
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 149 QKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKE----ETKEDAEEKQ 201
+K +T+ E +E EE E+K G K EK EK + KE + KE+ E+K+
Sbjct: 6 KKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKR 62
Score = 29.6 bits (65), Expect = 1.8
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 146 ENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ 201
E K K K +E RKE E+++K + K E+ +K + K++ +E+ EE++
Sbjct: 24 EKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEE 79
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 33.9 bits (76), Expect = 0.096
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 42 EEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKE-KGAIRLLMRRDK---TLK 97
++ EE+ K++AK R + D P +K+ D K+ K KE K ++ M R K +K
Sbjct: 435 KQGEEKGTKVQAK--REKLQEDKPTFKKEEIKDEKIKKDKEPKEEVKSFMDRKKGFTEVK 492
Query: 98 ICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPE----LLAIRF----LNAENAQ 149
++T ++ N S + A+ P+ E L +R +E +
Sbjct: 493 SQNGEFMTHKLKHTENTFSRPGGRASVDTKEAEGAPQVEAGKRLEELRRRRGETESEEFE 552
Query: 150 KFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ 201
K K K +E E+EE +K K + KV E+ E +EE E++
Sbjct: 553 KLKQKQQEAALELEELKK-----KREERRKVLEEEEQRRKQEEADRKLREEE 599
Score = 32.3 bits (72), Expect = 0.28
Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 19/205 (9%)
Query: 5 KDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEED-----EEELFKMRAKLFRFA 59
+D E+ E +E P+ S+ E +++ + E+ +EE M K + +
Sbjct: 178 RDAEENKKEDKEKEEEEEEKPKRG---SIGENQVEVMVEEKTTESQEETVVMSLKNGQIS 234
Query: 60 SENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRA 119
SE E +ER G ++ H++ + ++ A E +RA
Sbjct: 235 SEEPKQE-EEREQGSDEISHHEKMEEEDKERAEAERARLEAEERERIKAEQDKKIADERA 293
Query: 120 WVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKN---DH 176
+ A E + E E ++ + + E R+ I+E EK+A + +
Sbjct: 294 RIEAEEKAAAQERERREAE-----ERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEE 348
Query: 177 AEKVAEKLEALSVKEETKEDAEEKQ 201
++ AE E +KEE K AEE+Q
Sbjct: 349 EKRAAE--ERQRIKEEEKRAAEERQ 371
Score = 28.9 bits (63), Expect = 3.1
Identities = 48/211 (22%), Positives = 82/211 (38%), Gaps = 20/211 (9%)
Query: 1 MAAAKDTHEDHDT---STENTDESNHDPQFEPIVSLPEQEI----KTLEEDEEELFKMRA 53
M K T +T S +N S+ +P+ E EI K EED+E RA
Sbjct: 211 MVEEKTTESQEETVVMSLKNGQISSEEPKQEEEREQGSDEISHHEKMEEEDKERAEAERA 270
Query: 54 KLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPN 113
+L E E ++ + ++ +EK A + RR+ + M E +
Sbjct: 271 RLEAEERERIKAEQDKKIADERARIEAEEKAAAQERERREAEER-------ERMREEEKR 323
Query: 114 AGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTK----FEECRKEIEEREKKA 169
A +R + A+E + + AE Q+ K + EE ++ E E+KA
Sbjct: 324 AAEERQRIKEEEKRAAEE--RQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEEEKA 381
Query: 170 GSGKNDHAEKVAEKLEALSVKEETKEDAEEK 200
+ +++ EK A+ + E E+K
Sbjct: 382 KVEEQKRNKQLEEKKHAMQETKIKGEKVEQK 412
Score = 28.5 bits (62), Expect = 4.0
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 22/204 (10%)
Query: 3 AAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKM---------RA 53
++++ ++ + + + S+H+ E E E LE +E E K RA
Sbjct: 234 SSEEPKQEEEREQGSDEISHHEKMEEEDKERAEAERARLEAEERERIKAEQDKKIADERA 293
Query: 54 KLFRFASENDLPEWKERGTGDVK-LLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKP 112
++ A E + +ER + + ++ +EK A R + K A + E +
Sbjct: 294 RIE--AEEKAAAQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEER-QRIKEEEK 350
Query: 113 NAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSG 172
A +R + A+E + AE +K K + ++ K++EE+ K A
Sbjct: 351 RAAEERQRIKEEEKRAAEERQRAR--------AEEEEKAKVEEQKRNKQLEEK-KHAMQE 401
Query: 173 KNDHAEKVAEKLEALSVKEETKED 196
EKV +K+E V E+ ++
Sbjct: 402 TKIKGEKVEQKIEGKWVNEKKAQE 425
>gi|190194423 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 33.5 bits (75), Expect = 0.12
Identities = 19/56 (33%), Positives = 24/56 (42%)
Query: 145 AENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEK 200
AE T R E EE EK+ D + AEK L KEE+ E + E+
Sbjct: 32 AETVAPDNTAIPSLRAEAEENEKETAVSTEDDSHHKAEKSSVLKSKEESHEQSAEQ 87
>gi|190341024 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 33.5 bits (75), Expect = 0.12
Identities = 19/56 (33%), Positives = 24/56 (42%)
Query: 145 AENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEK 200
AE T R E EE EK+ D + AEK L KEE+ E + E+
Sbjct: 32 AETVAPDNTAIPSLRAEAEENEKETAVSTEDDSHHKAEKSSVLKSKEESHEQSAEQ 87
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 33.1 bits (74), Expect = 0.16
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 133 PKPELLAIRFLNAENAQKFKTKFEECRKEIEE-REKKAGSGKNDHAEKVAEKLEALSV-K 190
PK +L+ QK K++ E KEIEE R K G D + + E+L+AL + K
Sbjct: 26 PKEDLIKFAKKQMMLIQKAKSRCTELEKEIEELRSKPVTEGTGDIIKALTERLDALLLEK 85
Query: 191 EETKE 195
ET++
Sbjct: 86 AETEQ 90
Score = 28.1 bits (61), Expect = 5.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 10/56 (17%)
Query: 33 LPEQEIKTLEEDEEELFKMRAKLFRF----------ASENDLPEWKERGTGDVKLL 78
L E+ KT+E +++L KM A+LF+ +S+ L +ER D+ LL
Sbjct: 1450 LQEEHRKTVETLQQQLSKMEAQLFQLKNEPTTRSPVSSQQSLKNLRERRNTDLPLL 1505
>gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
sapiens]
Length = 142
Score = 32.7 bits (73), Expect = 0.21
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 156 EECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ 201
EE R+E + RE+K GK E+ E+ E +EE +E+ EE++
Sbjct: 74 EEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
Score = 28.5 bits (62), Expect = 4.0
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 134 KPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEET 193
K E +R A + + + EE R+E + RE+K K ++ EK E +EE
Sbjct: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKR-REKEEEKEEEEEE 105
Query: 194 KEDAEEKQ 201
+E+ EE++
Sbjct: 106 EEEEEEEE 113
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 32.7 bits (73), Expect = 0.21
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 18/210 (8%)
Query: 9 EDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWK 68
E+ ++ N +S + Q E + S EQE K + E K+ L + A E+ L
Sbjct: 1014 EEDKVNSLNKTKSKLEQQVEDLESSLEQEKKLRVDLERNKRKLEGDL-KLAQESILDLEN 1072
Query: 69 ERGTGDVKLLKHK-EKGAIRLLMRRDKTLKICANHYITPMM----ELKPNAGSDRAWVWN 123
++ D +L K E ++ + ++TL + I + EL+ ++RA
Sbjct: 1073 DKQQLDERLKKKDFEYCQLQSKVEDEQTLGLQFQKKIKELQARIEELEEEIEAERATRAK 1132
Query: 124 THADFADECPKPELLAIRFLNA--------ENAQKFKTKFEECRKEIEE----REKKAGS 171
T +D + E L+ R A E +K + +F + R+++EE E +
Sbjct: 1133 TEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRDLEEATLQHEAMVAA 1192
Query: 172 GKNDHAEKVAEKLEALSVKEETKEDAEEKQ 201
+ HA+ VAE E + + K+ E+++
Sbjct: 1193 LRKKHADSVAELGEQIDNLQRVKQKLEKEK 1222
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 32.7 bits (73), Expect = 0.21
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 35/206 (16%)
Query: 2 AAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASE 61
+A+K + ED + DE + + E+E + E E+E + + KL E
Sbjct: 548 SASKASQEDANEIKSKRDEEERERERRE----KEREREREREKEKEREREKQKLKESEKE 603
Query: 62 NDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWV 121
D + KE+G D + KE I K LKI ELK S +
Sbjct: 604 RDSAKDKEKGKHDDG--RKKEAEII-------KQLKI----------ELKKAQESQKE-- 642
Query: 122 WNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECR---KEIEEREKKAGSGKNDH-- 176
D PK + ++ + AE +K K + E+ R K++E++EKK D
Sbjct: 643 MKLLLDMYRSAPKEQRDKVQLMAAE--KKSKAELEDLRQRLKDLEDKEKKENKKMADEDA 700
Query: 177 ---AEKVAEKLEALSVKEETKEDAEE 199
V E++E L K + EE
Sbjct: 701 LRKIRAVEEQIEYLQKKLAMAKQEEE 726
Score = 30.0 bits (66), Expect = 1.4
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 146 ENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEK-LEALSVKEETKEDAEEKQ 201
E+A + K+K +E +E E REK+ + EK E+ + L E+ ++ A++K+
Sbjct: 555 EDANEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEKERDSAKDKE 611
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 32.3 bits (72), Expect = 0.28
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 134 KPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEET 193
K ELL +R E ++ K E ++E+E+ AG D + K E L +EE
Sbjct: 586 KQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAG----DTRQVEVLKKELLRTQEEL 641
Query: 194 KEDAEEKQ 201
KE E+Q
Sbjct: 642 KELQAERQ 649
>gi|154426331 early undifferentiated retina and lens isoform 1 [Homo
sapiens]
Length = 297
Score = 32.3 bits (72), Expect = 0.28
Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 23/165 (13%)
Query: 16 ENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDV 75
++ E + +PQ + E K L + + ++ K AK W + G +
Sbjct: 107 DSDSECSKNPQHHLFNFRHKPEEKLLPQFDSQVPKYSAK------------WIDGSAGGI 154
Query: 76 -----KLLKHKEKGAIRLLMRRDKTLKICANHYITP-----MMELKPNAGSDRAWVWNTH 125
++L+ +E L M +D +C N + P + + S A V H
Sbjct: 155 SNCTQRILEQRENTDFGLSMLQDSGATLCRNSVLWPHSHNQAQKKEETISSPEANVQTQH 214
Query: 126 ADFA-DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKA 169
++ +E L + LNA+ Q+ + FEE +++E++ A
Sbjct: 215 PHYSREELNSMTLGEVEQLNAKLLQQIQEVFEELTHQVQEKDSLA 259
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,156,027
Number of Sequences: 37866
Number of extensions: 389017
Number of successful extensions: 2965
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 109
Number of HSP's that attempted gapping in prelim test: 2318
Number of HSP's gapped (non-prelim): 655
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.