| Name: PRM1 | Sequence: fasta or formatted (51aa) | NCBI GI: 4506109 | |
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Description: protamine 1
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Referenced in: Nonhistone Chromosomal Proteins
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.9 2 1 C cysteine 11.8 6 2 D aspartate 0.0 0 0 E glutamate 0.0 0 0 F phenylalanine 0.0 0 0 G glycine 0.0 0 0 H histidine 2.0 1 1 I isoleucine 0.0 0 0 K lysine 0.0 0 0 L leucine 0.0 0 0 M methionine 3.9 2 1 N asparagine 0.0 0 0 P proline 3.9 2 1 Q glutamine 7.8 4 1 R arginine 47.1 24 6 S serine 9.8 5 1 T threonine 2.0 1 1 V valine 0.0 0 0 W tryptophan 0.0 0 0 Y tyrosine 7.8 4 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 protamine 1 PRM2 0.233 protamine 2 LUC7L 0.133 LUC7-like isoform b LUC7L 0.133 LUC7-like isoform a LUC7L2 0.100 LUC7-like 2 RSRC2 0.100 arginine/serine-rich coiled-coil 2 isoform b RSRC2 0.100 arginine/serine-rich coiled-coil 2 isoform a SFRS6 0.089 arginine/serine-rich splicing factor 6 SFRS2B 0.089 splicing factor, arginine/serine-rich 2B SFRS11 0.078 splicing factor, arginine/serine-rich 11 SON 0.078 SON DNA-binding protein isoform F SON 0.078 SON DNA-binding protein isoform B C1orf63 0.078 hypothetical protein LOC57035 LOC100293644 0.078 PREDICTED: hypothetical protein LOC100287563 0.078 PREDICTED: hypothetical protein LOC100287563 0.078 PREDICTED: hypothetical protein XP_002343733 LOC100294073 0.078 PREDICTED: hypothetical protein, partial SFRS2 0.078 splicing factor, arginine/serine-rich 2 SCAF1 0.078 SR-related CTD-associated factor 1 CROP 0.078 cisplatin resistance-associated overexpressed protei... CROP 0.078 cisplatin resistance-associated overexpressed protei... SFRS7 0.067 splicing factor, arginine/serine-rich 7 GPATCH8 0.067 G patch domain containing 8 NRTN 0.056 neurturin preproprotein PRPF38A 0.056 PRP38 pre-mRNA processing factor 38 (yeast) domain c... DIDO1 0.056 death inducer-obliterator 1 isoform c ZRSR2 0.056 U2 small nuclear RNA auxiliary factor 1-like 2 RSRC1 0.056 arginine/serine-rich coiled-coil 1 SFRS15 0.056 splicing factor, arginine/serine-rich 15 isoform 3 ... SFRS15 0.056 splicing factor, arginine/serine-rich 15 isoform 2 ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
