Guide to the Human Genome
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Name: C1orf63 Sequence: fasta or formatted (290aa) NCBI GI: 46309849
Description:

hypothetical protein LOC57035

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         16           2
 C cysteine            0.3          1           1
 D aspartate           2.4          7           1
 E glutamate           4.8         14           2
 F phenylalanine       2.1          6           1
 G glycine             5.2         15           2
 H histidine           1.0          3           1
 I isoleucine          3.1          9           1
 K lysine              5.5         16           2
 L leucine             3.1          9           2
 M methionine          1.0          3           1
 N asparagine          3.1          9           2
 P proline             5.2         15           1
 Q glutamine           2.4          7           2
 R arginine           20.3         59           3
 S serine             21.4         62           2
 T threonine           4.8         14           2
 V valine              2.4          7           1
 W tryptophan          1.0          3           1
 Y tyrosine            5.2         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57035 
SON                   0.139   SON DNA-binding protein isoform F 
SON                   0.139   SON DNA-binding protein isoform B 
SFRS4                 0.126   splicing factor, arginine/serine-rich 4 
SFRS16                0.122   splicing factor, arginine/serine-rich 16 
SFRS6                 0.104   arginine/serine-rich splicing factor 6 
SFRS18                0.102   splicing factor, arginine/serine-rich 130 
SFRS18                0.102   splicing factor, arginine/serine-rich 130 
RSRC2                 0.102   arginine/serine-rich coiled-coil 2 isoform a 
SRRM2                 0.101   splicing coactivator subunit SRm300 
LOC100170229          0.095   hypothetical protein LOC100170229 
NKTR                  0.095   natural killer-tumor recognition sequence 
RSRC2                 0.095   arginine/serine-rich coiled-coil 2 isoform b 
SFRS12                0.091   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.091   splicing factor, arginine/serine-rich 12 isoform b [...
PPIG                  0.088   peptidylprolyl isomerase G 
SFRS11                0.080   splicing factor, arginine/serine-rich 11 
ZRANB2                0.080   zinc finger protein 265 isoform 1 
CHERP                 0.080   calcium homeostasis endoplasmic reticulum protein [...
SFRS2                 0.079   splicing factor, arginine/serine-rich 2 
BCLAF1                0.079   BCL2-associated transcription factor 1 isoform 3 [H...
BCLAF1                0.079   BCL2-associated transcription factor 1 isoform 1 [Hom...
TRA2A                 0.077   transformer-2 alpha 
DDX46                 0.077   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
LOC731605             0.075   PREDICTED: similar to BCL2-associated transcription...
LOC731605             0.075   PREDICTED: similar to BCL2-associated transcription...
BCLAF1                0.075   BCL2-associated transcription factor 1 isoform 2 [H...
KIAA1853              0.075   KIAA1853 protein 
SFRS7                 0.073   splicing factor, arginine/serine-rich 7 
CCNL2                 0.073   cyclin L2 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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