Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RSRC1 Sequence: fasta or formatted (334aa) NCBI GI: 38488727
Description:

arginine/serine-rich coiled-coil 1

Referenced in:

Coiled-Coil Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         23           3
 C cysteine            0.0          0           0
 D aspartate           4.8         16           2
 E glutamate           9.9         33           3
 F phenylalanine       1.2          4           1
 G glycine             3.9         13           2
 H histidine           2.4          8           1
 I isoleucine          2.7          9           1
 K lysine             11.4         38           3
 L leucine             4.5         15           1
 M methionine          0.6          2           1
 N asparagine          1.5          5           1
 P proline             3.6         12           2
 Q glutamine           3.3         11           2
 R arginine           17.4         58           4
 S serine             17.4         58           7
 T threonine           3.3         11           1
 V valine              3.3         11           1
 W tryptophan          0.6          2           1
 Y tyrosine            1.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arginine/serine-rich coiled-coil 1 
RSRC2                 0.121   arginine/serine-rich coiled-coil 2 isoform a 
SFRS16                0.115   splicing factor, arginine/serine-rich 16 
SFRS18                0.113   splicing factor, arginine/serine-rich 130 
SFRS12                0.113   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.113   splicing factor, arginine/serine-rich 12 isoform b [...
SFRS18                0.113   splicing factor, arginine/serine-rich 130 
SFRS4                 0.110   splicing factor, arginine/serine-rich 4 
DDX46                 0.108   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
RSRC2                 0.108   arginine/serine-rich coiled-coil 2 isoform b 
ZRANB2                0.103   zinc finger protein 265 isoform 1 
ZRANB2                0.100   zinc finger protein 265 isoform 2 
LOC100170229          0.100   hypothetical protein LOC100170229 
SFRS11                0.100   splicing factor, arginine/serine-rich 11 
PRPF38B               0.097   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
PPIG                  0.095   peptidylprolyl isomerase G 
RBM25                 0.092   RNA binding motif protein 25 
CROP                  0.090   cisplatin resistance-associated overexpressed protei...
CROP                  0.090   cisplatin resistance-associated overexpressed protei...
LOC100286959          0.089   PREDICTED: hypothetical protein XP_002343921 
LOC100131202          0.087   PREDICTED: hypothetical protein 
LUC7L2                0.087   LUC7-like 2 
ARGLU1                0.087   arginine and glutamate rich 1 
LOC100133599          0.086   PREDICTED: hypothetical protein 
SRRM2                 0.086   splicing coactivator subunit SRm300 
DDX23                 0.086   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
SFRS8                 0.084   splicing factor, arginine/serine-rich 8 
SCAF1                 0.084   SR-related CTD-associated factor 1 
SON                   0.082   SON DNA-binding protein isoform F 
SON                   0.082   SON DNA-binding protein isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press