Guide to the Human Genome
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Name: ZNF317 Sequence: fasta or formatted (595aa) NCBI GI: 190610008
Description:

zinc finger protein 317

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         31           2
 C cysteine            5.2         31           1
 D aspartate           3.9         23           1
 E glutamate           6.9         41           3
 F phenylalanine       4.0         24           1
 G glycine             6.9         41           1
 H histidine           7.4         44           1
 I isoleucine          1.8         11           1
 K lysine              8.6         51           2
 L leucine             6.6         39           2
 M methionine          2.5         15           1
 N asparagine          2.5         15           1
 P proline             4.2         25           1
 Q glutamine           3.9         23           1
 R arginine            7.2         43           3
 S serine              8.6         51           2
 T threonine           6.4         38           2
 V valine              4.4         26           1
 W tryptophan          0.8          5           1
 Y tyrosine            3.0         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 317 
ZNF846                0.378   zinc finger protein 846 
ZNF420                0.373   zinc finger protein 420 
ZNF709                0.371   zinc finger protein 709 isoform a 
ZNF30                 0.370   zinc finger protein 30 isoform b 
ZNF568                0.368   zinc finger protein 568 
ZNF184                0.368   zinc finger protein 184 
ZNF30                 0.366   zinc finger protein 30 isoform a 
ZNF30                 0.366   zinc finger protein 30 isoform a 
ZNF699                0.366   zinc finger protein 699 
ZNF135                0.365   zinc finger protein 135 
ZNF737                0.363   PREDICTED: zinc finger protein 737 
ZNF737                0.363   PREDICTED: zinc finger protein 737 
ZNF737                0.363   PREDICTED: zinc finger protein 737 
ZNF791                0.362   zinc finger protein 791 
ZNF546                0.362   zinc finger protein 546 
ZNF726                0.361   PREDICTED: zinc finger protein 726 
ZNF726                0.360   PREDICTED: zinc finger protein 726 
ZNF726                0.360   PREDICTED: zinc finger protein 726 
ZNF569                0.359   zinc finger protein 569 
ZFP14                 0.359   zinc finger protein 14-like 
ZNF470                0.358   zinc finger protein 470 
ZNF99                 0.357   zinc finger protein 99 
ZNF555                0.354   zinc finger protein 555 
LOC729747             0.350   similar to zinc finger protein 709 
ZNF14                 0.350   zinc finger protein 14 
ZNF585B               0.350   zinc finger protein 585B 
ZNF250                0.349   zinc finger protein 250 isoform b 
ZNF780A               0.348   zinc finger protein 780A isoform b 
ZNF780A               0.348   zinc finger protein 780A isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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