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Search of human proteins with 4505911
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505911 postmeiotic segregation 1 isoform a [Homo sapiens]
(932 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505911 postmeiotic segregation 1 isoform a [Homo sapiens] 1858 0.0
gi|189458896 postmeiotic segregation 1 isoform b [Homo sapiens] 1762 0.0
gi|189458898 postmeiotic segregation 1 isoform c [Homo sapiens] 1230 0.0
gi|4505913 PMS2 postmeiotic segregation increased 2 isoform a [H... 181 2e-45
gi|4557757 MutL protein homolog 1 [Homo sapiens] 131 3e-30
gi|239743246 PREDICTED: hypothetical protein XP_002342778 [Homo ... 125 2e-28
gi|169170512 PREDICTED: similar to Postmeiotic segregation incre... 125 2e-28
gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens] 103 1e-21
gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens] 103 1e-21
gi|194688135 high-mobility group box 2 [Homo sapiens] 52 3e-06
gi|194688133 high-mobility group box 2 [Homo sapiens] 52 3e-06
gi|11321591 high-mobility group box 2 [Homo sapiens] 52 3e-06
gi|4507241 structure specific recognition protein 1 [Homo sapiens] 51 6e-06
gi|4504425 high-mobility group box 1 [Homo sapiens] 50 1e-05
gi|71143137 high-mobility group box 3 [Homo sapiens] 49 3e-05
gi|4507401 transcription factor A, mitochondrial [Homo sapiens] 48 5e-05
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo... 47 6e-05
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom... 47 6e-05
gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo... 47 8e-05
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho... 46 1e-04
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho... 46 1e-04
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho... 46 1e-04
gi|115529449 upstream binding transcription factor, RNA polymera... 46 1e-04
gi|115529451 upstream binding transcription factor, RNA polymera... 46 1e-04
gi|7657671 upstream binding transcription factor, RNA polymerase... 46 1e-04
gi|51173873 high-mobility group protein 2-like 1 [Homo sapiens] 46 2e-04
gi|169212060 PREDICTED: high mobility group protein B3-like prot... 46 2e-04
gi|239745831 PREDICTED: high mobility group protein B3-like prot... 46 2e-04
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens] 46 2e-04
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] 45 2e-04
>gi|4505911 postmeiotic segregation 1 isoform a [Homo sapiens]
Length = 932
Score = 1858 bits (4812), Expect = 0.0
Identities = 932/932 (100%), Positives = 932/932 (100%)
Query: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
Query: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG 180
YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG
Sbjct: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG 180
Query: 181 ILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL 240
ILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL
Sbjct: 181 ILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL 240
Query: 241 PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID 300
PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID
Sbjct: 241 PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID 300
Query: 301 VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL 360
VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL
Sbjct: 301 VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL 360
Query: 361 SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH 420
SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH
Sbjct: 361 SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH 420
Query: 421 CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGE 480
CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGE
Sbjct: 421 CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGE 480
Query: 481 NEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPIPEQMN 540
NEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPIPEQMN
Sbjct: 481 NEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPIPEQMN 540
Query: 541 LNEDSCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENPKTSLED 600
LNEDSCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENPKTSLED
Sbjct: 541 LNEDSCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENPKTSLED 600
Query: 601 ATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQESQMSLKDGRKKIKPTSAW 660
ATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQESQMSLKDGRKKIKPTSAW
Sbjct: 601 ATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQESQMSLKDGRKKIKPTSAW 660
Query: 661 NLAQKHKLKTSLSNQPKLDELLQSQIEKRRSQNIKMVQIPFSMKNLKINFKKQNKVDLEE 720
NLAQKHKLKTSLSNQPKLDELLQSQIEKRRSQNIKMVQIPFSMKNLKINFKKQNKVDLEE
Sbjct: 661 NLAQKHKLKTSLSNQPKLDELLQSQIEKRRSQNIKMVQIPFSMKNLKINFKKQNKVDLEE 720
Query: 721 KDEPCLIHNLRFPDAWLMTSKTEVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTE 780
KDEPCLIHNLRFPDAWLMTSKTEVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTE
Sbjct: 721 KDEPCLIHNLRFPDAWLMTSKTEVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTE 780
Query: 781 SLFNGSHYLDVLYKMTADDQRYSGSTYLSDPRLTANGFKIKLIPGVSITENYLEIEGMAN 840
SLFNGSHYLDVLYKMTADDQRYSGSTYLSDPRLTANGFKIKLIPGVSITENYLEIEGMAN
Sbjct: 781 SLFNGSHYLDVLYKMTADDQRYSGSTYLSDPRLTANGFKIKLIPGVSITENYLEIEGMAN 840
Query: 841 CLPFYGVADLKEILNAILNRNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDI 900
CLPFYGVADLKEILNAILNRNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDI
Sbjct: 841 CLPFYGVADLKEILNAILNRNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDI 900
Query: 901 IYRMKHQFGNEIKECVHGRPFFHHLTYLPETT 932
IYRMKHQFGNEIKECVHGRPFFHHLTYLPETT
Sbjct: 901 IYRMKHQFGNEIKECVHGRPFFHHLTYLPETT 932
>gi|189458896 postmeiotic segregation 1 isoform b [Homo sapiens]
Length = 893
Score = 1762 bits (4564), Expect = 0.0
Identities = 893/932 (95%), Positives = 893/932 (95%), Gaps = 39/932 (4%)
Query: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
Query: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG 180
YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG
Sbjct: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG 180
Query: 181 ILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL 240
ILKPDLRIVFVHNK IYLSGFL
Sbjct: 181 ILKPDLRIVFVHNK---------------------------------------IYLSGFL 201
Query: 241 PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID 300
PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID
Sbjct: 202 PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID 261
Query: 301 VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL 360
VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL
Sbjct: 262 VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL 321
Query: 361 SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH 420
SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH
Sbjct: 322 SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH 381
Query: 421 CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGE 480
CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGE
Sbjct: 382 CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGE 441
Query: 481 NEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPIPEQMN 540
NEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPIPEQMN
Sbjct: 442 NEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPIPEQMN 501
Query: 541 LNEDSCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENPKTSLED 600
LNEDSCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENPKTSLED
Sbjct: 502 LNEDSCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENPKTSLED 561
Query: 601 ATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQESQMSLKDGRKKIKPTSAW 660
ATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQESQMSLKDGRKKIKPTSAW
Sbjct: 562 ATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQESQMSLKDGRKKIKPTSAW 621
Query: 661 NLAQKHKLKTSLSNQPKLDELLQSQIEKRRSQNIKMVQIPFSMKNLKINFKKQNKVDLEE 720
NLAQKHKLKTSLSNQPKLDELLQSQIEKRRSQNIKMVQIPFSMKNLKINFKKQNKVDLEE
Sbjct: 622 NLAQKHKLKTSLSNQPKLDELLQSQIEKRRSQNIKMVQIPFSMKNLKINFKKQNKVDLEE 681
Query: 721 KDEPCLIHNLRFPDAWLMTSKTEVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTE 780
KDEPCLIHNLRFPDAWLMTSKTEVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTE
Sbjct: 682 KDEPCLIHNLRFPDAWLMTSKTEVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTE 741
Query: 781 SLFNGSHYLDVLYKMTADDQRYSGSTYLSDPRLTANGFKIKLIPGVSITENYLEIEGMAN 840
SLFNGSHYLDVLYKMTADDQRYSGSTYLSDPRLTANGFKIKLIPGVSITENYLEIEGMAN
Sbjct: 742 SLFNGSHYLDVLYKMTADDQRYSGSTYLSDPRLTANGFKIKLIPGVSITENYLEIEGMAN 801
Query: 841 CLPFYGVADLKEILNAILNRNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDI 900
CLPFYGVADLKEILNAILNRNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDI
Sbjct: 802 CLPFYGVADLKEILNAILNRNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDI 861
Query: 901 IYRMKHQFGNEIKECVHGRPFFHHLTYLPETT 932
IYRMKHQFGNEIKECVHGRPFFHHLTYLPETT
Sbjct: 862 IYRMKHQFGNEIKECVHGRPFFHHLTYLPETT 893
>gi|189458898 postmeiotic segregation 1 isoform c [Homo sapiens]
Length = 770
Score = 1230 bits (3182), Expect = 0.0
Identities = 623/641 (97%), Positives = 625/641 (97%), Gaps = 9/641 (1%)
Query: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
Query: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG 180
YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG
Sbjct: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG 180
Query: 181 ILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL 240
ILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL
Sbjct: 181 ILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL 240
Query: 241 PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID 300
PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID
Sbjct: 241 PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID 300
Query: 301 VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL 360
VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL
Sbjct: 301 VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL 360
Query: 361 SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH 420
SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH
Sbjct: 361 SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH 420
Query: 421 CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGE 480
CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGE
Sbjct: 421 CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGE 480
Query: 481 NEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPIPEQMN 540
NEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPIPEQMN
Sbjct: 481 NEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPIPEQMN 540
Query: 541 LNEDSCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENPKTSLED 600
LNEDSCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENPKTSLED
Sbjct: 541 LNEDSCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENPKTSLED 600
Query: 601 ATLQIEELWKTLSEEEKLKYEE---------KATKDLERYN 632
ATLQIEELWKTLSEEEKL K T D +RY+
Sbjct: 601 ATLQIEELWKTLSEEEKLNLFNGSHYLDVLYKMTADDQRYS 641
Score = 315 bits (808), Expect = 1e-85
Identities = 159/176 (90%), Positives = 162/176 (92%), Gaps = 2/176 (1%)
Query: 759 KRLLENHKLPAEPLEKPIMLTE--SLFNGSHYLDVLYKMTADDQRYSGSTYLSDPRLTAN 816
K LE+ L E L K + E +LFNGSHYLDVLYKMTADDQRYSGSTYLSDPRLTAN
Sbjct: 595 KTSLEDATLQIEELWKTLSEEEKLNLFNGSHYLDVLYKMTADDQRYSGSTYLSDPRLTAN 654
Query: 817 GFKIKLIPGVSITENYLEIEGMANCLPFYGVADLKEILNAILNRNAKEVYECRPRKVISY 876
GFKIKLIPGVSITENYLEIEGMANCLPFYGVADLKEILNAILNRNAKEVYECRPRKVISY
Sbjct: 655 GFKIKLIPGVSITENYLEIEGMANCLPFYGVADLKEILNAILNRNAKEVYECRPRKVISY 714
Query: 877 LEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRPFFHHLTYLPETT 932
LEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRPFFHHLTYLPETT
Sbjct: 715 LEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRPFFHHLTYLPETT 770
>gi|4505913 PMS2 postmeiotic segregation increased 2 isoform a [Homo
sapiens]
Length = 862
Score = 181 bits (460), Expect = 2e-45
Identities = 125/376 (33%), Positives = 199/376 (52%), Gaps = 39/376 (10%)
Query: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
+K + +V + S Q++ S+ + VKEL+ENSLDAGAT++D+KL++YG D IEV DNG G
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
++ + + +K++TSKI DL + T+GFRGEAL S+C +++V I+T A+ T+
Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134
Query: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVR-KQFYSTAKKCKDEIKKIQDLLMSF 179
+ D +G I+ + P +GTTV+ +LF LPVR K+F KK E K+ +L ++
Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKK---EYAKMVQVLHAY 191
Query: 180 GILKPDLRIVFVH-----NKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQI 234
I+ +R+ + + + K + SV G + ++ F +
Sbjct: 192 CIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSV 251
Query: 235 ----------------YLSGFLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRH 278
Y+SGF+ +C H ST +R F FIN RP + +L+
Sbjct: 252 CEEYGLSCSDALHNLFYISGFISQC--THGVGRSST-DRQFFFINRRPCDPAKVCRLVNE 308
Query: 279 HYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYG 338
Y++ + YP L I V + VD+N+TPDK Q+LLQ +E +L+A+ L T+ G
Sbjct: 309 VYHM----YNRHQYPFVVLNISVDSECVDINVTPDKRQILLQ-EEKLLLAV--LKTSLIG 361
Query: 339 PLPSTNSYENNKTDVS 354
S + NK +VS
Sbjct: 362 MFDS----DVNKLNVS 373
Score = 30.4 bits (67), Expect = 8.0
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 816 NGFKIKLIPGVSITENYLEIEGMANCLPFYGVADLKEILNAILNRNAKEVYECRPRKVIS 875
NGF + +TE I + +G D+ E++ + + CRP +V
Sbjct: 749 NGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG---VMCRPSRVKQ 805
Query: 876 YLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRPFFHHLTYL 928
A R S + L+ +++ +I M + C HGRP H+ L
Sbjct: 806 MFASRACRKSVMIGTALNTSEMKKLITHMGEM--DHPWNCPHGRPTMRHIANL 856
>gi|4557757 MutL protein homolog 1 [Homo sapiens]
Length = 756
Score = 131 bits (329), Expect = 3e-30
Identities = 92/332 (27%), Positives = 162/332 (48%), Gaps = 22/332 (6%)
Query: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
+++L V +++ ++I + +KE+IEN LDA +TS+ V ++ G I+++DNG G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
I+ D ++ ++ TSK+ S EDL +++TYGFRGEAL SI +A V ITT+TA + +
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFG 180
KP QGT +T LF N+ R++ K +E KI +++ +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRK---ALKNPSEEYGKILEVVGRYS 184
Query: 181 ILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL 240
VHN + + + + + ++ + ++N+ S ++ ++ G
Sbjct: 185 ----------VHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCE 234
Query: 241 PKCDADHSFTSLSTPERS------FIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPV 294
K A +S S +FIN R V + K I Y K + +P
Sbjct: 235 DKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNT---HPF 291
Query: 295 FFLKIDVPTADVDVNLTPDKSQVLLQNKESVL 326
+L +++ +VDVN+ P K +V ++ES+L
Sbjct: 292 LYLSLEISPQNVDVNVHPTKHEVHFLHEESIL 323
>gi|239743246 PREDICTED: hypothetical protein XP_002342778 [Homo
sapiens]
Length = 255
Score = 125 bits (313), Expect = 2e-28
Identities = 64/165 (38%), Positives = 104/165 (63%), Gaps = 1/165 (0%)
Query: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
+K + +V + S ++ S+ + VK+++ NSLDAGAT++D+KL++YG D IEV NG G
Sbjct: 30 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 89
Query: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
++ + + +K++TSKI DL + T+GF+G+AL S+C +++V I+T + T+
Sbjct: 90 VEEENFEGLTLKHHTSKIREFADLTRVETFGFQGKALSSLCALSDVTISTCHVSAKVGTR 149
Query: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVR-KQFYSTAKK 164
V D G I+ + P +GTTV+ +LF LPVR K+F KK
Sbjct: 150 LVFDHDGKIIQKTPYPHPRGTTVSVKQLFSTLPVRHKEFQRNIKK 194
>gi|169170512 PREDICTED: similar to Postmeiotic segregation
increased 4-like protein [Homo sapiens]
Length = 255
Score = 125 bits (313), Expect = 2e-28
Identities = 64/165 (38%), Positives = 104/165 (63%), Gaps = 1/165 (0%)
Query: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
+K + +V + S ++ S+ + VK+++ NSLDAGAT++D+KL++YG D IEV NG G
Sbjct: 30 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 89
Query: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
++ + + +K++TSKI DL + T+GF+G+AL S+C +++V I+T + T+
Sbjct: 90 VEEENFEGLTLKHHTSKIREFADLTRVETFGFQGKALSSLCALSDVTISTCHVSAKVGTR 149
Query: 121 YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVR-KQFYSTAKK 164
V D G I+ + P +GTTV+ +LF LPVR K+F KK
Sbjct: 150 LVFDHDGKIIQKTPYPHPRGTTVSVKQLFSTLPVRHKEFQRNIKK 194
>gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens]
Length = 1453
Score = 103 bits (256), Expect = 1e-21
Identities = 133/567 (23%), Positives = 223/567 (39%), Gaps = 97/567 (17%)
Query: 12 LSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIKAVDAPVMAM 71
L S I+S+ V+EL NS+DA A V V++ F +++V DNG G+ + D +
Sbjct: 13 LRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETF-QVQVIDNGFGMGSDDVEKVGN 71
Query: 72 KYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQYVLDGSGHIL- 130
+Y+TSK +S +DLEN YGFRGEAL +I +A + + T L SG L
Sbjct: 72 RYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTFVKLFQSGKALK 131
Query: 131 --SQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKD---EIKKIQDLLMSFGILKPD 185
+ GTTVT LF LPVR +KC D E +K++ + + ++ P
Sbjct: 132 ACEADVTRASAGTTVTVYNLFYQLPVR-------RKCMDPRLEFEKVRQRIEALSLMHPS 184
Query: 186 LRIVFVH--NKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFLPKC 243
+ + + +++ Q + D + G + + +E + LSG++
Sbjct: 185 ISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFE--LSGYI--- 239
Query: 244 DADHSFTSLSTPERSFIFINSRPVHQKDILKLI------------------RHHYNLKCL 285
S + F+F+N R V + + KLI N
Sbjct: 240 ----SSEAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLR 295
Query: 286 KEST-RLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIAL----------ENLMT 334
ST LY ++ + + + DV + P K+ + QN +++L + E L
Sbjct: 296 HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQEKLFV 355
Query: 335 TCYGPLPSTNSYENNKTDVSAADIVLSKTAETD----------------VLFNKVESSGK 378
G S +N S D L K +D +FN + K
Sbjct: 356 ELSGEDIKEFSEDNG---FSLFDATLQKRVTSDERSNFQEACNNILDSYEMFNLQSKAVK 412
Query: 379 NYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGHCSS-EISNIDKNTKNAFQ 437
+ + + Q+ ++ + KNT+D + G G+ + + N D + +
Sbjct: 413 RKTTAEN--VNTQSSRDSEATRKNTNDAFLYIYESGGPGHSKMTEPSLQNKDSSCSESKM 470
Query: 438 DISMSNVSWENSQTEYSKTCFISSVKHTQSEN-------------GNKDHIDESGENEEE 484
+ V+ E + E K F+ +H+ EN H +ESG++
Sbjct: 471 LEQETIVASEAGENEKHKKSFL---EHSSLENPCGTSLEMFLSPFQTPCHFEESGQD--- 524
Query: 485 AGLENSSEISADEWSRGNILKNSVGEN 511
LE E + NILKN+ +N
Sbjct: 525 --LEIWKESTTVNGMAANILKNNRIQN 549
>gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens]
Length = 1429
Score = 103 bits (256), Expect = 1e-21
Identities = 133/567 (23%), Positives = 223/567 (39%), Gaps = 97/567 (17%)
Query: 12 LSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIKAVDAPVMAM 71
L S I+S+ V+EL NS+DA A V V++ F +++V DNG G+ + D +
Sbjct: 13 LRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETF-QVQVIDNGFGMGSDDVEKVGN 71
Query: 72 KYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQYVLDGSGHIL- 130
+Y+TSK +S +DLEN YGFRGEAL +I +A + + T L SG L
Sbjct: 72 RYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTFVKLFQSGKALK 131
Query: 131 --SQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKD---EIKKIQDLLMSFGILKPD 185
+ GTTVT LF LPVR +KC D E +K++ + + ++ P
Sbjct: 132 ACEADVTRASAGTTVTVYNLFYQLPVR-------RKCMDPRLEFEKVRQRIEALSLMHPS 184
Query: 186 LRIVFVH--NKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFLPKC 243
+ + + +++ Q + D + G + + +E + LSG++
Sbjct: 185 ISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFE--LSGYI--- 239
Query: 244 DADHSFTSLSTPERSFIFINSRPVHQKDILKLI------------------RHHYNLKCL 285
S + F+F+N R V + + KLI N
Sbjct: 240 ----SSEAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLR 295
Query: 286 KEST-RLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIAL----------ENLMT 334
ST LY ++ + + + DV + P K+ + QN +++L + E L
Sbjct: 296 HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQEKLFV 355
Query: 335 TCYGPLPSTNSYENNKTDVSAADIVLSKTAETD----------------VLFNKVESSGK 378
G S +N S D L K +D +FN + K
Sbjct: 356 ELSGEDIKEFSEDNG---FSLFDATLQKRVTSDERSNFQEACNNILDSYEMFNLQSKAVK 412
Query: 379 NYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGHCSS-EISNIDKNTKNAFQ 437
+ + + Q+ ++ + KNT+D + G G+ + + N D + +
Sbjct: 413 RKTTAEN--VNTQSSRDSEATRKNTNDAFLYIYESGGPGHSKMTEPSLQNKDSSCSESKM 470
Query: 438 DISMSNVSWENSQTEYSKTCFISSVKHTQSEN-------------GNKDHIDESGENEEE 484
+ V+ E + E K F+ +H+ EN H +ESG++
Sbjct: 471 LEQETIVASEAGENEKHKKSFL---EHSSLENPCGTSLEMFLSPFQTPCHFEESGQD--- 524
Query: 485 AGLENSSEISADEWSRGNILKNSVGEN 511
LE E + NILKN+ +N
Sbjct: 525 --LEIWKESTTVNGMAANILKNNRIQN 549
>gi|194688135 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 52.0 bits (123), Expect = 3e-06
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P SA LF +HRP+ E+P S+ D ++ E+W S ++K YE+KA K E+Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 632 NSQM 635
+
Sbjct: 156 EKDI 159
Score = 49.7 bits (117), Expect = 1e-05
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 575 MSASALFVQDHRPQFLIENPKTSLEDATL--QIEELWKTLSEEEKLKYEEKATKDLERYN 632
MS+ A FVQ R + ++P +S+ A + E WKT+S +EK K+E+ A D RY+
Sbjct: 13 MSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYD 72
Query: 633 SQMKRAI--EQESQMSLKDGRKKIKPTSAWNL-AQKHKLKTSLSNQPKLD--ELLQSQIE 687
+MK + + + + KD +P SA+ L +H+ K S P L + + E
Sbjct: 73 REMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIK-SEHPGLSIGDTAKKLGE 131
Query: 688 KRRSQNIKMVQIPFSMKNLKINFKKQNKV 716
Q+ K Q P+ K K+ K + +
Sbjct: 132 MWSEQSAKDKQ-PYEQKAAKLKEKYEKDI 159
>gi|194688133 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 52.0 bits (123), Expect = 3e-06
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P SA LF +HRP+ E+P S+ D ++ E+W S ++K YE+KA K E+Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 632 NSQM 635
+
Sbjct: 156 EKDI 159
Score = 49.7 bits (117), Expect = 1e-05
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 575 MSASALFVQDHRPQFLIENPKTSLEDATL--QIEELWKTLSEEEKLKYEEKATKDLERYN 632
MS+ A FVQ R + ++P +S+ A + E WKT+S +EK K+E+ A D RY+
Sbjct: 13 MSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYD 72
Query: 633 SQMKRAI--EQESQMSLKDGRKKIKPTSAWNL-AQKHKLKTSLSNQPKLD--ELLQSQIE 687
+MK + + + + KD +P SA+ L +H+ K S P L + + E
Sbjct: 73 REMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIK-SEHPGLSIGDTAKKLGE 131
Query: 688 KRRSQNIKMVQIPFSMKNLKINFKKQNKV 716
Q+ K Q P+ K K+ K + +
Sbjct: 132 MWSEQSAKDKQ-PYEQKAAKLKEKYEKDI 159
>gi|11321591 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 52.0 bits (123), Expect = 3e-06
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P SA LF +HRP+ E+P S+ D ++ E+W S ++K YE+KA K E+Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 632 NSQM 635
+
Sbjct: 156 EKDI 159
Score = 49.7 bits (117), Expect = 1e-05
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 575 MSASALFVQDHRPQFLIENPKTSLEDATL--QIEELWKTLSEEEKLKYEEKATKDLERYN 632
MS+ A FVQ R + ++P +S+ A + E WKT+S +EK K+E+ A D RY+
Sbjct: 13 MSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYD 72
Query: 633 SQMKRAI--EQESQMSLKDGRKKIKPTSAWNL-AQKHKLKTSLSNQPKLD--ELLQSQIE 687
+MK + + + + KD +P SA+ L +H+ K S P L + + E
Sbjct: 73 REMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIK-SEHPGLSIGDTAKKLGE 131
Query: 688 KRRSQNIKMVQIPFSMKNLKINFKKQNKV 716
Q+ K Q P+ K K+ K + +
Sbjct: 132 MWSEQSAKDKQ-PYEQKAAKLKEKYEKDI 159
>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
Length = 709
Score = 50.8 bits (120), Expect = 6e-06
Identities = 70/320 (21%), Positives = 125/320 (39%), Gaps = 41/320 (12%)
Query: 410 QISIGDFGYGHCSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTC-FISSVKHTQSE 468
+IS +F G ++ + + TK Q + S++ E EY K F+++ K
Sbjct: 373 EISFVNFARGTTTTRSFDFEIETKQGTQ-YTFSSIERE----EYGKLFDFVNAKKLNIKN 427
Query: 469 NGNK-------DHIDESGENEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPE 521
G K D +S E++ +A LE E N + GE + E
Sbjct: 428 RGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDESFNPGEE 487
Query: 522 KSLPCKVSNNNYPIPEQMNLNEDSCNKKSN--------VIDNKSGK--VTAYDLLSNRVI 571
+ + ++N N + ++K D KS K V
Sbjct: 488 EEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAP 547
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+PMSA L++ R + ++P S+ D + + E+WK +S+E+K +++ KA Y
Sbjct: 548 KRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDY 607
Query: 632 NSQMKRAIEQESQMSLKDGRKKIK------------------PTSAWNLAQKHKLKTSLS 673
MK + S +D KK K +S+ L++ K K +S
Sbjct: 608 EKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESFKSKEFVS 667
Query: 674 NQPKLDELLQSQIEKRRSQN 693
+ +S+ ++RRS++
Sbjct: 668 SDESSSGENKSKKKRRRSED 687
>gi|4504425 high-mobility group box 1 [Homo sapiens]
Length = 215
Score = 50.1 bits (118), Expect = 1e-05
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 572 KKP---MSASALFVQDHRPQFLIENPKTSLE--DATLQIEELWKTLSEEEKLKYEEKATK 626
KKP MS+ A FVQ R + ++P S+ + + + E WKT+S +EK K+E+ A
Sbjct: 7 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKA 66
Query: 627 DLERYNSQMKRAI--EQESQMSLKDGRKKIKPTSAWNL 662
D RY +MK I + E++ KD +P SA+ L
Sbjct: 67 DKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL 104
Score = 48.5 bits (114), Expect = 3e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P SA LF ++RP+ E+P S+ D ++ E+W + ++K YE+KA K E+Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 632 NSQM 635
+
Sbjct: 156 EKDI 159
>gi|71143137 high-mobility group box 3 [Homo sapiens]
Length = 200
Score = 48.5 bits (114), Expect = 3e-05
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 572 KKP---MSASALFVQDHRPQFLIENPKTSLEDATL--QIEELWKTLSEEEKLKYEEKATK 626
KKP MSA A FVQ R + +NP+ + A + E WKT+S +EK K++E A
Sbjct: 7 KKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKA 66
Query: 627 DLERYNSQMKRAIEQESQMSLKDGRKKIKPTSAWNL 662
D RY+ +MK + KD +P S + L
Sbjct: 67 DKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFL 102
Score = 45.8 bits (107), Expect = 2e-04
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P S LF + RP+ NP S+ D ++ E+W L++ EK Y KA K E+Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKY 153
Query: 632 NSQM 635
+
Sbjct: 154 EKDV 157
>gi|4507401 transcription factor A, mitochondrial [Homo sapiens]
Length = 246
Score = 47.8 bits (112), Expect = 5e-05
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 5/163 (3%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
KKP+S+ F ++ P F +NP + +I + W+ L + +K Y++ + + Y
Sbjct: 51 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVY 110
Query: 632 NSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQKHKLKTSLSNQPKLDELLQSQIEKRRS 691
++ R EQ + + K+I A K + +L +PK + R
Sbjct: 111 KEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYVAERF 170
Query: 692 QNIKMVQIPFSMKNLKINFKKQNKVDLE-----EKDEPCLIHN 729
Q K +K +K N+K + + E K++ HN
Sbjct: 171 QEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHN 213
Score = 43.1 bits (100), Expect = 0.001
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P SA ++V + + ++P+ L+ ++E WK LS+ EK Y + A +D RY
Sbjct: 156 KRPRSAYNVYVAERFQEAKGDSPQEKLKT----VKENWKNLSDSEKELYIQHAKEDETRY 211
Query: 632 NSQMKRAIEQESQMSLKD 649
+++MK EQ ++ KD
Sbjct: 212 HNEMKSWEEQMIEVGRKD 229
>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
sapiens]
Length = 501
Score = 47.4 bits (111), Expect = 6e-05
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 568 NRVIKKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKD 627
N +K+PM+A ++ + HRP NP + + ++Q+ W LSEE+K Y ++A K
Sbjct: 334 NGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKI 393
Query: 628 LERYNSQMKRAIEQESQMSLKDGRKKIKPTSAWNL 662
E++ + + Q + G++K P S N+
Sbjct: 394 KEKHREEFPGWVYQP-----RPGKRKRFPLSVSNV 423
>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
sapiens]
Length = 753
Score = 47.4 bits (111), Expect = 6e-05
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 568 NRVIKKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKD 627
N +K+PM+A ++ + HRP NP + + ++Q+ W LSEE+K Y ++A K
Sbjct: 334 NGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKI 393
Query: 628 LERYNSQMKRAIEQESQMSLKDGRKKIKPTSAWNL 662
E++ + + Q + G++K P S N+
Sbjct: 394 KEKHREEFPGWVYQP-----RPGKRKRFPLSVSNV 423
>gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo
sapiens]
Length = 805
Score = 47.0 bits (110), Expect = 8e-05
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 41/191 (21%)
Query: 568 NRVIKKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWK---TLSEEEKLKYEEKA 624
N ++ P S ++ H Q E S E LQ+ E K +L EEK K EEK
Sbjct: 424 NTSLQTPFSEESV---SHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKL 480
Query: 625 TKDLERYNSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQKHKLKTSLSNQPKLDEL--- 681
K +RY S +K+ ++ES+ + K+ +++I+ L+ L++ P LD++
Sbjct: 481 -KTRDRYISSLKKKCQKESEQN-KEKQRRIE-----------TLEKYLADLPTLDDVQSQ 527
Query: 682 -LQSQIEKRRSQNIKMVQIPFSMKNLKINFKKQNK------------------VDLEEKD 722
LQ QI + +++N++ I K +I + Q+K L++K
Sbjct: 528 SLQLQILEEKNKNLQEALIDTEKKLEEIKKQCQDKETQLICQKKKEKELVTTVQSLQQKV 587
Query: 723 EPCLIHNLRFP 733
E CL +R P
Sbjct: 588 ERCLEDGIRLP 598
>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P S LF + RP+ NP S+ D ++ E+W L++ EK Y KA K E+Y
Sbjct: 93 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKY 152
Query: 632 NSQM 635
+
Sbjct: 153 EKDV 156
Score = 34.3 bits (77), Expect = 0.55
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 572 KKP---MSASALFVQDHRPQFLIENPKTSLEDATL--QIEELWKTLSEEEKLKYEEKATK 626
KKP MSA A VQ + +NP+ + A + WKT+S +EK K+ E A
Sbjct: 7 KKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGEMAKA 66
Query: 627 DLERYNSQMK 636
D Y+ +MK
Sbjct: 67 DEVCYDREMK 76
>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P S LF + RP+ NP S+ D ++ E+W L++ EK Y KA K E+Y
Sbjct: 93 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKY 152
Query: 632 NSQM 635
+
Sbjct: 153 EKDV 156
Score = 34.7 bits (78), Expect = 0.42
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 572 KKP---MSASALFVQDHRPQFLIENPKTSLEDATL--QIEELWKTLSEEEKLKYEEKATK 626
KKP MSA A VQ + +NP+ + A + WKT+S +EK K+ E A
Sbjct: 7 KKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGEMAKA 66
Query: 627 DLERYNSQMK 636
D Y+ +MK
Sbjct: 67 DEVCYDREMK 76
>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P S LF + RP+ NP S+ D ++ E+W L++ EK Y KA K E+Y
Sbjct: 93 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKY 152
Query: 632 NSQM 635
+
Sbjct: 153 EKDV 156
Score = 34.7 bits (78), Expect = 0.42
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 572 KKP---MSASALFVQDHRPQFLIENPKTSLEDATL--QIEELWKTLSEEEKLKYEEKATK 626
KKP MSA A VQ + +NP+ + A + WKT+S +EK K+ E A
Sbjct: 7 KKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGEMAKA 66
Query: 627 DLERYNSQMK 636
D Y+ +MK
Sbjct: 67 DEVCYDREMK 76
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 46.2 bits (108), Expect = 1e-04
Identities = 55/262 (20%), Positives = 110/262 (41%), Gaps = 37/262 (14%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P+SA +F ++ R Q E P+ S + T + +W LSE++K KY KA + +
Sbjct: 371 KRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKY--KAREAALKA 428
Query: 632 NSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQKH-------------KLKTSLSNQPKL 678
S+ K E+E + L + K+ + ++ + ++ + +N K
Sbjct: 429 QSERKPGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKK 488
Query: 679 DELL----QSQIEKRRSQNIKMVQIPFSMKNLKINFKKQNKVDLEEKDEPCLIHNLRFPD 734
++L+ ++ +KR + + ++ P + N K Q E +P + +F
Sbjct: 489 EKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG-----EPKKPPMNGYQKFSQ 543
Query: 735 AWLMTSKTEVMLLNPYRVEEALLFKRL----LENHKLPAEPLEKPIMLTESLFNGSHYLD 790
L + + L VE ++R+ E++K AE +K + +LD
Sbjct: 544 ELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKV---------HLD 594
Query: 791 VLYKMTADDQRYSGSTYLSDPR 812
+ K + R + Y+S+ R
Sbjct: 595 LWVKSLSPQDRAAYKEYISNKR 616
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 46.2 bits (108), Expect = 1e-04
Identities = 55/262 (20%), Positives = 110/262 (41%), Gaps = 37/262 (14%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P+SA +F ++ R Q E P+ S + T + +W LSE++K KY KA + +
Sbjct: 371 KRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKY--KAREAALKA 428
Query: 632 NSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQKH-------------KLKTSLSNQPKL 678
S+ K E+E + L + K+ + ++ + ++ + +N K
Sbjct: 429 QSERKPGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKK 488
Query: 679 DELL----QSQIEKRRSQNIKMVQIPFSMKNLKINFKKQNKVDLEEKDEPCLIHNLRFPD 734
++L+ ++ +KR + + ++ P + N K Q E +P + +F
Sbjct: 489 EKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG-----EPKKPPMNGYQKFSQ 543
Query: 735 AWLMTSKTEVMLLNPYRVEEALLFKRL----LENHKLPAEPLEKPIMLTESLFNGSHYLD 790
L + + L VE ++R+ E++K AE +K + +LD
Sbjct: 544 ELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKV---------HLD 594
Query: 791 VLYKMTADDQRYSGSTYLSDPR 812
+ K + R + Y+S+ R
Sbjct: 595 LWVKSLSPQDRAAYKEYISNKR 616
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 46.2 bits (108), Expect = 1e-04
Identities = 55/262 (20%), Positives = 110/262 (41%), Gaps = 37/262 (14%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P+SA +F ++ R Q E P+ S + T + +W LSE++K KY KA + +
Sbjct: 408 KRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKY--KAREAALKA 465
Query: 632 NSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQKH-------------KLKTSLSNQPKL 678
S+ K E+E + L + K+ + ++ + ++ + +N K
Sbjct: 466 QSERKPGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKK 525
Query: 679 DELL----QSQIEKRRSQNIKMVQIPFSMKNLKINFKKQNKVDLEEKDEPCLIHNLRFPD 734
++L+ ++ +KR + + ++ P + N K Q E +P + +F
Sbjct: 526 EKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG-----EPKKPPMNGYQKFSQ 580
Query: 735 AWLMTSKTEVMLLNPYRVEEALLFKRL----LENHKLPAEPLEKPIMLTESLFNGSHYLD 790
L + + L VE ++R+ E++K AE +K + +LD
Sbjct: 581 ELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKV---------HLD 631
Query: 791 VLYKMTADDQRYSGSTYLSDPR 812
+ K + R + Y+S+ R
Sbjct: 632 LWVKSLSPQDRAAYKEYISNKR 653
>gi|51173873 high-mobility group protein 2-like 1 [Homo sapiens]
Length = 601
Score = 45.8 bits (107), Expect = 2e-04
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
KK MSA +F +++R + ++P + + ++ E+WK L E++KL +++KA +
Sbjct: 408 KKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQ 467
Query: 632 NSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQKHK 667
N +++++ S +G K+K +S L+ + K
Sbjct: 468 NKAEATTVKRKASSS--EGSMKVKASSVGVLSPQKK 501
>gi|169212060 PREDICTED: high mobility group protein B3-like
protein-like [Homo sapiens]
Length = 207
Score = 45.8 bits (107), Expect = 2e-04
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 572 KKP---MSASALFVQDHRPQFLIENPKTSLEDATL--QIEELWKTLSEEEKLKYEEKATK 626
KKP MSA A FVQ R + +NPK + A + E WKT+S++EK K+ E A
Sbjct: 7 KKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELAKA 66
Query: 627 DLERYNSQMK 636
D Y+ ++K
Sbjct: 67 DKVHYDQEIK 76
Score = 40.4 bits (93), Expect = 0.008
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P S LF + P+ NP + D ++ E+WK L++ EK Y +A K E+Y
Sbjct: 93 KRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKY 152
Query: 632 NSQM 635
+
Sbjct: 153 EKDV 156
>gi|239745831 PREDICTED: high mobility group protein B3-like
protein-like [Homo sapiens]
Length = 207
Score = 45.8 bits (107), Expect = 2e-04
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 572 KKP---MSASALFVQDHRPQFLIENPKTSLEDATL--QIEELWKTLSEEEKLKYEEKATK 626
KKP MSA A FVQ R + +NPK + A + E WKT+S++EK K+ E A
Sbjct: 7 KKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELAKA 66
Query: 627 DLERYNSQMK 636
D Y+ ++K
Sbjct: 67 DKVHYDQEIK 76
Score = 40.4 bits (93), Expect = 0.008
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P S LF + P+ NP + D ++ E+WK L++ EK Y +A K E+Y
Sbjct: 93 KRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKY 152
Query: 632 NSQM 635
+
Sbjct: 153 EKDV 156
>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
Length = 211
Score = 45.8 bits (107), Expect = 2e-04
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 572 KKP---MSASALFVQDHRPQFLIENPKTSLE--DATLQIEELWKTLSEEEKLKYEEKATK 626
KKP MS+ A FVQ R + ++ S+ + + + E WKT+S +EK K+E+ A
Sbjct: 7 KKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMAKA 66
Query: 627 DLERYNSQMKRAI--EQESQMSLKDGRKKIKPTSAWNL 662
D Y QMK I + E++ KD +P SA+ L
Sbjct: 67 DKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFL 104
Score = 42.7 bits (99), Expect = 0.002
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P SA LF ++ P+ E+P S+ D ++ E+W + ++K E+KA K E+Y
Sbjct: 96 KRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKY 155
Query: 632 NSQM 635
+
Sbjct: 156 EKDI 159
>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
Length = 879
Score = 45.4 bits (106), Expect = 2e-04
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
K+P A LF ++RP+ E+P S++D ++ +W + +K YE+KA K E+Y
Sbjct: 770 KRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLKEKY 829
Query: 632 -------------NSQMKRAIEQESQMSLKD 649
NS KR ++ E K+
Sbjct: 830 KKDIAAYRAKGKPNSAKKRVVKAEKSKKKKE 860
Score = 40.8 bits (94), Expect = 0.006
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 536 PEQMNLNEDSCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIE--- 592
P + + D K+ + + G T L+ N+ + +P S + + L++
Sbjct: 640 PREFEIEGDRGASKNWKLSIRCGGYTLKVLMENKFLPEPPSTRKKRILESHNNTLVDPCE 699
Query: 593 -----NPKTSLEDATL--QIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAI--EQES 643
NP S++ + + E WKT+ +EK K+E+ A D Y +MK I + E
Sbjct: 700 EHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGEK 759
Query: 644 QMSLKDGRKKIKPTSAWNL 662
+ KD +P A+ L
Sbjct: 760 KKKFKDPNAPKRPPLAFFL 778
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,275,301
Number of Sequences: 37866
Number of extensions: 1466989
Number of successful extensions: 5064
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 213
Number of HSP's that attempted gapping in prelim test: 4484
Number of HSP's gapped (non-prelim): 681
length of query: 932
length of database: 18,247,518
effective HSP length: 112
effective length of query: 820
effective length of database: 14,006,526
effective search space: 11485351320
effective search space used: 11485351320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.