Guide to the Human Genome
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Name: PLP2 Sequence: fasta or formatted (152aa) NCBI GI: 4505893
Description:

proteolipid protein 2 (colonic epithelium-enriched)

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         16           2
 C cysteine            3.9          6           1
 D aspartate           3.9          6           1
 E glutamate           2.6          4           1
 F phenylalanine       6.6         10           2
 G glycine             5.3          8           1
 H histidine           2.0          3           1
 I isoleucine         10.5         16           2
 K lysine              2.0          3           1
 L leucine            10.5         16           2
 M methionine          2.0          3           1
 N asparagine          2.0          3           1
 P proline             5.9          9           1
 Q glutamine           0.7          1           1
 R arginine            4.6          7           1
 S serine              7.2         11           2
 T threonine           6.6         10           1
 V valine              7.9         12           2
 W tryptophan          2.0          3           1
 Y tyrosine            3.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proteolipid protein 2 (colonic epithelium-enriched) [... 
CMTM5                 0.193   chemokine-like factor superfamily 5 isoform a 
CMTM3                 0.140   chemokine-like factor superfamily 3 
CMTM3                 0.140   chemokine-like factor superfamily 3 
CMTM3                 0.140   chemokine-like factor superfamily 3 
CMTM3                 0.140   chemokine-like factor superfamily 3 
CMTM7                 0.112   CKLF-like MARVEL transmembrane domain containing 7 i...
CMTM5                 0.102   chemokine-like factor superfamily 5 isoform c 
CMTM4                 0.102   chemokine-like factor superfamily 4 isoform 2 
CMTM4                 0.102   chemokine-like factor superfamily 4 isoform 1 
CMTM1                 0.098   chemokine-like factor superfamily 1 isoform 13 [Hom...
CMTM1                 0.084   chemokine-like factor superfamily 1 isoform 1 
CMTM1                 0.077   chemokine-like factor superfamily 1 isoform 14 [Hom...
CMTM1                 0.067   chemokine-like factor superfamily 1 isoform 2 
CMTM8                 0.056   CKLF-like MARVEL transmembrane domain containing 8 [...
CMTM2                 0.056   chemokine-like factor superfamily 2 
PLLP                  0.035   plasmolipin 
CMTM6                 0.028   CKLF-like MARVEL transmembrane domain containing 6 [H...
OR5V1                 0.011   olfactory receptor, family 5, subfamily V, member 1 ...
ALG9                  0.011   asparagine-linked glycosylation 9 protein isoform a...
ALG9                  0.011   asparagine-linked glycosylation 9 protein isoform d...
ALG9                  0.011   asparagine-linked glycosylation 9 protein isoform c...
ALG9                  0.011   asparagine-linked glycosylation 9 protein isoform b...
PCDH11Y               0.007   protocadherin 11 Y-linked isoform c 
PCDH11Y               0.007   protocadherin 11 Y-linked isoform b 
PCDH11Y               0.007   protocadherin 11 Y-linked isoform a 
PCDH11X               0.007   protocadherin 11 X-linked isoform a precursor 
PCDH11X               0.007   protocadherin 11 X-linked isoform d 
PCDH11X               0.007   protocadherin 11 X-linked isoform c 
PCDH11X               0.007   protocadherin 11 X-linked isoform b precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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