Guide to the Human Genome
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Name: ALG9 Sequence: fasta or formatted (440aa) NCBI GI: 118026935
Description:

asparagine-linked glycosylation 9 protein isoform d

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [618aa] asparagine-linked glycosylation 9 protein isoform a
alt prot [611aa] asparagine-linked glycosylation 9 protein isoform b
alt prot [447aa] asparagine-linked glycosylation 9 protein isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         28           2
 C cysteine            1.6          7           1
 D aspartate           3.2         14           1
 E glutamate           3.6         16           2
 F phenylalanine       8.0         35           2
 G glycine             5.0         22           2
 H histidine           2.5         11           1
 I isoleucine          5.2         23           2
 K lysine              3.9         17           2
 L leucine            13.6         60           2
 M methionine          2.7         12           2
 N asparagine          3.0         13           1
 P proline             7.3         32           1
 Q glutamine           2.5         11           1
 R arginine            4.5         20           1
 S serine              6.8         30           3
 T threonine           4.8         21           2
 V valine              6.6         29           3
 W tryptophan          2.5         11           1
 Y tyrosine            6.4         28           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   asparagine-linked glycosylation 9 protein isoform d... 
ALG9                  1.000   asparagine-linked glycosylation 9 protein isoform b...
ALG9                  0.992   asparagine-linked glycosylation 9 protein isoform a...
ALG9                  0.992   asparagine-linked glycosylation 9 protein isoform c...
PIGB                  0.021   phosphatidylinositol glycan, class B 
ALG12                 0.020   alpha-1,6-mannosyltransferase ALG12 
KDM3A                 0.011   jumonji domain containing 1A 
KDM3A                 0.011   jumonji domain containing 1A 
RNASEN                0.006   ribonuclease III, nuclear isoform 2 
RNASEN                0.006   ribonuclease III, nuclear isoform 1 
GPR173                0.006   G protein-coupled receptor 173 
RLBP1L1               0.006   retinaldehyde binding protein 1-like 1 
GPR89A                0.004   G protein-coupled receptor 89A isoform 1 
GPR89B                0.004   G protein-coupled receptor 89B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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