Guide to the Human Genome
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Name: NAPG Sequence: fasta or formatted (312aa) NCBI GI: 4505331
Description:

N-ethylmaleimide-sensitive factor attachment protein, gamma

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.5         42           2
 C cysteine            1.9          6           1
 D aspartate           5.4         17           1
 E glutamate          10.3         32           3
 F phenylalanine       2.6          8           1
 G glycine             5.8         18           3
 H histidine           1.6          5           1
 I isoleucine          2.9          9           1
 K lysine              9.0         28           3
 L leucine             9.3         29           2
 M methionine          2.6          8           2
 N asparagine          4.5         14           2
 P proline             3.5         11           1
 Q glutamine           5.8         18           2
 R arginine            3.8         12           2
 S serine              4.2         13           1
 T threonine           2.9          9           1
 V valine              5.4         17           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.8         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-ethylmaleimide-sensitive factor attachment protein,... 
NAPB                  0.065   N-ethylmaleimide-sensitive factor attachment protein...
NAPA                  0.059   N-ethylmaleimide-sensitive factor attachment protein...
NPHP3                 0.020   nephrocystin 3 
SH3TC2                0.017   SH3 domain and tetratricopeptide repeats 2 
ADAM17                0.013   a disintegrin and metalloprotease domain 17 prepropr...
RPAP3                 0.013   RNA polymerase II associated protein 3 isoform 3 [H...
RPAP3                 0.013   RNA polymerase II associated protein 3 isoform 1 [H...
MYO18B                0.013   myosin XVIIIB 
STIP1                 0.012   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
PARN                  0.012   poly(A)-specific ribonuclease (deadenylation nuclea...
PARN                  0.012   poly(A)-specific ribonuclease (deadenylation nuclease...
LOC100133220          0.010   PREDICTED: hypothetical protein 
HMMR                  0.010   hyaluronan-mediated motility receptor isoform a [Ho...
HMMR                  0.010   hyaluronan-mediated motility receptor isoform b [Ho...
FYCO1                 0.010   FYVE and coiled-coil domain containing 1 
ARAP3                 0.010   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
NEFH                  0.008   neurofilament, heavy polypeptide 200kDa 
CCDC88B               0.008   coiled-coil domain containing 88 
PPL                   0.008   periplakin 
F8A1                  0.008   coagulation factor VIII-associated protein 
UTY                   0.008   tetratricopeptide repeat protein isoform 3 
UTY                   0.008   tetratricopeptide repeat protein isoform 1 
UTY                   0.008   tetratricopeptide repeat protein isoform 2 
F8A3                  0.008   coagulation factor VIII-associated (intronic transcr...
F8A2                  0.008   coagulation factor VIII-associated (intronic transcr...
PSMC3IP               0.008   PSMC3 interacting protein isoform 1 
WDR19                 0.008   WD repeat domain 19 
KIF16B                0.007   kinesin-like motor protein C20orf23 
FLAD1                 0.007   flavin adenine dinucleotide synthetase isoform 2 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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