Guide to the Human Genome
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Name: ADAM17 Sequence: fasta or formatted (824aa) NCBI GI: 73747889
Description:

a disintegrin and metalloprotease domain 17 preproprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         38           2
 C cysteine            4.2         35           2
 D aspartate           7.9         65           3
 E glutamate           7.0         58           2
 F phenylalanine       4.4         36           2
 G glycine             5.5         45           2
 H histidine           2.4         20           1
 I isoleucine          4.2         35           2
 K lysine              7.5         62           2
 L leucine             7.6         63           2
 M methionine          1.8         15           1
 N asparagine          5.1         42           2
 P proline             5.6         46           3
 Q glutamine           4.0         33           2
 R arginine            4.7         39           2
 S serine              7.8         64           2
 T threonine           5.0         41           3
 V valine              6.7         55           4
 W tryptophan          0.7          6           1
 Y tyrosine            3.2         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   a disintegrin and metalloprotease domain 17 prepropr... 
ADAM10                0.136   ADAM metallopeptidase domain 10 
ADAM19                0.053   ADAM metallopeptidase domain 19 preproprotein 
ADAM33                0.051   ADAM metallopeptidase domain 33 isoform alpha prepro...
ADAM33                0.051   ADAM metallopeptidase domain 33 isoform beta preprop...
ADAM8                 0.047   ADAM metallopeptidase domain 8 precursor 
ADAM15                0.047   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.047   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.047   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.047   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.047   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.047   a disintegrin and metalloproteinase domain 15 isofor...
ADAM9                 0.046   ADAM metallopeptidase domain 9 isoform 1 precursor [H...
ADAM12                0.045   ADAM metallopeptidase domain 12 isoform 2 preproprot...
ADAM12                0.045   ADAM metallopeptidase domain 12 isoform 1 preproprot...
ADAM29                0.044   ADAM metallopeptidase domain 29 preproprotein [Homo...
ADAM29                0.044   ADAM metallopeptidase domain 29 preproprotein [Homo...
ADAM29                0.044   ADAM metallopeptidase domain 29 preproprotein [Homo...
ADAM29                0.044   ADAM metallopeptidase domain 29 preproprotein 
ADAM23                0.043   ADAM metallopeptidase domain 23 preproprotein 
ADAM22                0.039   ADAM metallopeptidase domain 22 isoform 1 preproprot...
ADAM22                0.039   ADAM metallopeptidase domain 22 isoform 2 preproprot...
ADAM22                0.039   ADAM metallopeptidase domain 22 isoform 5 preproprot...
ADAM22                0.039   ADAM metallopeptidase domain 22 isoform 3 preproprot...
ADAM22                0.039   ADAM metallopeptidase domain 22 isoform 4 preproprote...
ADAM30                0.037   ADAM metallopeptidase domain 30 preproprotein 
ADAM2                 0.037   ADAM metallopeptidase domain 2 proprotein 
ADAM11                0.036   ADAM metallopeptidase domain 11 preproprotein 
ADAM21                0.036   ADAM metallopeptidase domain 21 preproprotein 
ADAM7                 0.034   a disintegrin and metalloproteinase domain 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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