Guide to the Human Genome
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Name: F8A2 Sequence: fasta or formatted (371aa) NCBI GI: 56090588
Description:

coagulation factor VIII-associated (intronic transcript) 2

Referenced in:

Coagulation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            18.3         68           5
 C cysteine            1.9          7           1
 D aspartate           1.9          7           1
 E glutamate           6.7         25           2
 F phenylalanine       2.7         10           1
 G glycine             7.8         29           4
 H histidine           2.7         10           1
 I isoleucine          0.5          2           1
 K lysine              2.2          8           2
 L leucine            17.0         63           6
 M methionine          1.1          4           1
 N asparagine          1.1          4           1
 P proline             9.2         34           6
 Q glutamine           7.8         29           2
 R arginine            5.7         21           1
 S serine              4.9         18           2
 T threonine           2.4          9           1
 V valine              4.0         15           1
 W tryptophan          0.8          3           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coagulation factor VIII-associated (intronic transcr... 
F8A1                  1.000   coagulation factor VIII-associated protein 
F8A3                  1.000   coagulation factor VIII-associated (intronic transcr...
FNBP4                 0.030   formin binding protein 4 
ELK1                  0.028   ELK1 protein 
ELK1                  0.028   ELK1 protein 
FOXL2                 0.028   forkhead box L2 
ZFHX3                 0.027   AT-binding transcription factor 1 
WASF1                 0.025   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.025   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.025   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.025   Wiskott-Aldrich syndrome protein family member 1 [Hom...
WASF2                 0.024   WAS protein family, member 2 
MARCH11               0.024   membrane-associated ring finger (C3HC4) 11 
PDE4D                 0.023   phosphodiesterase 4D isoform 1 
HTT                   0.023   huntingtin 
HCN2                  0.023   hyperpolarization activated cyclic nucleotide-gated...
FMN1                  0.023   formin 1 
HES1                  0.023   hairy and enhancer of split 1 
LMTK3                 0.023   lemur tyrosine kinase 3 
ZIC5                  0.023   zinc finger protein of the cerebellum 5 
MAPK1IP1L             0.023   MAPK-interacting and spindle-stabilizing protein [Ho...
MED25                 0.021   mediator complex subunit 25 
LOC100292522          0.021   PREDICTED: similar to mCG146261 
LOC100287233          0.021   PREDICTED: similar to mCG146261 
LOC100287233          0.021   PREDICTED: hypothetical protein XP_002344225 
WAS                   0.021   Wiskott-Aldrich syndrome protein 
TAF3                  0.021   RNA polymerase II transcription factor TAFII140 [Ho...
DAAM1                 0.021   dishevelled-associated activator of morphogenesis 1 ...
IRF2BP2               0.021   interferon regulatory factor 2 binding protein 2 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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