BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|4504567 interferon regulatory factor 8 [Homo sapiens] (426 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4504567 interferon regulatory factor 8 [Homo sapiens] 882 0.0 gi|167555104 interferon regulatory factor 4 [Homo sapiens] 302 3e-82 gi|25282407 interferon-stimulated transcription factor 3, gamma ... 216 3e-56 gi|5453700 interferon regulatory factor 6 [Homo sapiens] 206 3e-53 gi|148833515 interferon regulatory factor 5 isoform c [Homo sapi... 200 2e-51 gi|148833492 interferon regulatory factor 5 isoform c [Homo sapi... 200 2e-51 gi|148833488 interferon regulatory factor 5 isoform c [Homo sapi... 200 2e-51 gi|148833494 interferon regulatory factor 5 isoform d [Homo sapi... 197 2e-50 gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens] 196 3e-50 gi|148833496 interferon regulatory factor 5 isoform b [Homo sapi... 196 3e-50 gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens] 196 3e-50 gi|4504725 interferon regulatory factor 3 [Homo sapiens] 129 7e-30 gi|4504721 interferon regulatory factor 1 [Homo sapiens] 118 1e-26 gi|153082752 interferon regulatory factor 2 [Homo sapiens] 117 2e-26 gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens] 89 8e-18 gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens] 89 8e-18 gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens] 89 8e-18 gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens] 57 2e-08 gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens] 57 2e-08 gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo ... 57 2e-08 gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 32 1.4 gi|14149680 extended synaptotagmin-like protein 1 [Homo sapiens] 31 1.9 gi|9256590 protocadherin alpha 5 isoform 1 precursor [Homo sapiens] 31 2.4 gi|14165416 protocadherin alpha 5 isoform 2 precursor [Homo sapi... 31 2.4 gi|25777608 NLR family member X1 isoform 1 [Homo sapiens] 30 4.2 gi|25777610 NLR family member X1 isoform 2 [Homo sapiens] 30 4.2 gi|157364934 fibrosin [Homo sapiens] 30 4.2 gi|49355778 inter-alpha trypsin inhibitor heavy chain precursor ... 30 5.5 gi|153945780 inter-alpha trypsin inhibitor heavy chain precursor... 30 5.5 gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4 ... 29 7.1 >gi|4504567 interferon regulatory factor 8 [Homo sapiens] Length = 426 Score = 882 bits (2279), Expect = 0.0 Identities = 426/426 (100%), Positives = 426/426 (100%) Query: 1 MCDRNGGRRLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAW 60 MCDRNGGRRLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAW Sbjct: 1 MCDRNGGRRLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAW 60 Query: 61 AVFKGKFKEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKC 120 AVFKGKFKEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKC Sbjct: 61 AVFKGKFKEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKC 120 Query: 121 KLGVATAGCVNEVTEMECGRSEIDELIKEPSVDDYMGMIKRSPSPPEACRSQLLPDWWAQ 180 KLGVATAGCVNEVTEMECGRSEIDELIKEPSVDDYMGMIKRSPSPPEACRSQLLPDWWAQ Sbjct: 121 KLGVATAGCVNEVTEMECGRSEIDELIKEPSVDDYMGMIKRSPSPPEACRSQLLPDWWAQ 180 Query: 181 QPSTGVPLVTGYTTYDAHHSAFSQMVISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGTK 240 QPSTGVPLVTGYTTYDAHHSAFSQMVISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGTK Sbjct: 181 QPSTGVPLVTGYTTYDAHHSAFSQMVISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGTK 240 Query: 241 LYGPEGLELVRFPPADAIPSERQRQVTRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCS 300 LYGPEGLELVRFPPADAIPSERQRQVTRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCS Sbjct: 241 LYGPEGLELVRFPPADAIPSERQRQVTRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCS 300 Query: 301 GNAVVCKGRPNKLERDEVVQVFDTSQFFRELQQFYNSQGRLPDGRVVLCFGEEFPDMAPL 360 GNAVVCKGRPNKLERDEVVQVFDTSQFFRELQQFYNSQGRLPDGRVVLCFGEEFPDMAPL Sbjct: 301 GNAVVCKGRPNKLERDEVVQVFDTSQFFRELQQFYNSQGRLPDGRVVLCFGEEFPDMAPL 360 Query: 361 RSKLILVQIEQLYVRQLAEEAGKSCGAGSVMQAPEEPPPDQVFRMFPDICASHQRSFFRE 420 RSKLILVQIEQLYVRQLAEEAGKSCGAGSVMQAPEEPPPDQVFRMFPDICASHQRSFFRE Sbjct: 361 RSKLILVQIEQLYVRQLAEEAGKSCGAGSVMQAPEEPPPDQVFRMFPDICASHQRSFFRE 420 Query: 421 NQQITV 426 NQQITV Sbjct: 421 NQQITV 426 >gi|167555104 interferon regulatory factor 4 [Homo sapiens] Length = 451 Score = 302 bits (774), Expect = 3e-82 Identities = 181/415 (43%), Positives = 233/415 (56%), Gaps = 46/415 (11%) Query: 6 GGRRLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKG 65 G +LRQWLI+QIDS YPGL+WENEEKS+FRIPWKHAGKQDYN+E DA++FKAWA+FKG Sbjct: 20 GNGKLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKG 79 Query: 66 KFKEG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKCKLGV 124 KF+EG DK +P TWKTRLRCALNKS DFEE+ +RSQLDIS+PYKVYRIVPE +K + Sbjct: 80 KFREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPEGAKKGAKQL 139 Query: 125 ATAGCVNEVTE--------MECGRSEIDELIKEPSVDDYMGMIKRSPSPP---------- 166 ++ ++ + P + + P P Sbjct: 140 TLEDPQMSMSHPYTMTTPYPSLPAQQVHNYMMPPLDRSWRDYVPDQPHPEIPYQCPMTFG 199 Query: 167 --------EACRS--QLLPDWWAQQP----STGVPLVTGYTTYDAHHSAFSQMVISFYYG 212 AC + Q+ ++A P + GVP + +A + ++ I YY Sbjct: 200 PRGHHWQGPACENGCQVTGTFYACAPPESQAPGVPTEPSIRSAEALAFSDCRLHICLYYR 259 Query: 213 GKLVGQATTTCPEGCRLSLSQPGLPGTKLYGPEGLELVRFP-PADAIPSERQRQVTRKLF 271 LV + TT+ PEGCR+S Y L+ V FP P D QR+ KL Sbjct: 260 EILVKELTTSSPEGCRISHGH-------TYDASNLDQVLFPYPED----NGQRKNIEKLL 308 Query: 272 GHLERGVLLHSSRQGVFVKRLCQGRVFCSGNAVVCKGRPNKLERDEVVQVFDTSQFFREL 331 HLERGV+L + G++ KRLCQ R++ G +C RPNKLERD+ ++FDT QF EL Sbjct: 309 SHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCNDRPNKLERDQTCKLFDTQQFLSEL 368 Query: 332 QQFYNSQGRLPDGRVVLCFGEEFPDMAPLRSKLILVQIEQLYVRQLAEEAGKSCG 386 Q F + LP +V LCFGEEFPD R KLI +E L RQL A ++ G Sbjct: 369 QAFAHHGRSLPRFQVTLCFGEEFPDPQRQR-KLITAHVEPLLARQLYYFAQQNSG 422 >gi|25282407 interferon-stimulated transcription factor 3, gamma 48kDa [Homo sapiens] Length = 393 Score = 216 bits (550), Expect = 3e-56 Identities = 127/386 (32%), Positives = 203/386 (52%), Gaps = 27/386 (6%) Query: 8 RRLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKF 67 R+LR W++EQ++S +PG+ W++ K+MFRIPWKHAGKQD+ ++ DA+ FKAWA+FKGK+ Sbjct: 10 RKLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKY 69 Query: 68 KEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKCKLGVATA 127 KEGD PA WKTRLRCALNKS +F+EV +R ++D++EPYKVY+++P + G Sbjct: 70 KEGDTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129 Query: 128 GCVNEVTEMECGRSEIDELIK----EPSVDDYMGMIKRSPSPPEACRSQLLPDWWAQQPS 183 + + + R E ++ ++ PSV + + A S + + P Sbjct: 130 PSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIGSSSSSSSPE 189 Query: 184 TGVPLVTGYTTYDAHHSAFS---------QMVISFYYGGKLVGQATTTCPEGCRLSLSQP 234 T + + ++++F Y G++VG+A + CRL Sbjct: 190 PQEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLD-CRLVAEPS 248 Query: 235 GLPGTKLYGPEGLELVRFPPADAIPSERQRQVTRKLFGHLERGVLLHSSRQGVFVKRLCQ 294 G +E V FP + + T++L LERG+L+ S+ +G+FV+RLC Sbjct: 249 G-------SESSMEQVLFPKPGPL------EPTQRLLSQLERGILVASNPRGLFVQRLCP 295 Query: 295 GRVFCSGNAVVCKGRPNKLERDEVVQVFDTSQFFRELQQFYNSQGRLPDGRVVLCFGEEF 354 + + P+ L +E V++F T+ F R+L +++ G P +V L F EE Sbjct: 296 IPISWNAPQAPPGPGPHLLPSNECVELFRTAYFCRDLVRYFQGLGPPPKFQVTLNFWEES 355 Query: 355 PDMAPLRSKLILVQIEQLYVRQLAEE 380 + LI V++EQ + R L E+ Sbjct: 356 HGSSHTPQNLITVKMEQAFARYLLEQ 381 >gi|5453700 interferon regulatory factor 6 [Homo sapiens] Length = 467 Score = 206 bits (524), Expect = 3e-53 Identities = 141/415 (33%), Positives = 212/415 (51%), Gaps = 37/415 (8%) Query: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 RL+ WL+ Q+DS +YPGLIW + + F+IPWKHA + QE + +IFKAWAV GK++ Sbjct: 9 RLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQ 68 Query: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVP-EEEQKCKLGVAT 126 EG D +PA WK +LRCALNKS +F + D ++ P K+Y++ + Q + + Sbjct: 69 EGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSIINPGS 128 Query: 127 AGCV------NEVTEMECGRSEIDELIKEPSVDDYMGMIKRSPSP--------------- 165 G N+V E E E+D+ + D + + SP Sbjct: 129 TGSAPWDEKDNDVDE-EDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGNCSVGNCS 187 Query: 166 PEACRSQLLPDWWAQQPSTGVPLVTGYTTYDAHHSA--FSQMVISFYYGGKLVGQA-TTT 222 PEA + P + P+ Y++ + S+ + + I F Y GK GQ T + Sbjct: 188 PEAVWPKTEP---LEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQTMTVS 244 Query: 223 CPEGCRLSLSQPG-LPG-TKLYGPEGLELVRFPPADAIPSERQRQVTRKLFGHLERGVLL 280 P+GCRL G +P +L+GP LE V+FP + I +E+Q+ T KL ++RG++L Sbjct: 245 NPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLIL 304 Query: 281 HSSRQGVFVKRLCQGRVFCSGNAVVCKGRPNKLERDEVVQVFDTSQFFRELQQFYNSQ-G 339 S ++ RLCQ +V+ SG PN +ER + V++F F +L Q Sbjct: 305 EVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQKGQIE 364 Query: 340 RLPDGRVVLCFGEEFPDMAPLRSKLILVQIEQLYVRQLAE----EAGKSCGAGSV 390 + P + LCFGEE+PD PL KLILVQ+ + R + E + +S +GSV Sbjct: 365 KQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSV 419 >gi|148833515 interferon regulatory factor 5 isoform c [Homo sapiens] Length = 488 Score = 200 bits (508), Expect = 2e-51 Identities = 148/410 (36%), Positives = 197/410 (48%), Gaps = 46/410 (11%) Query: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 RL+ WL+ Q++S YPGL W N EK +F IPW+HA + +Q+ D +IFKAWA GK+ Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75 Query: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRI-----VPEEEQKCKL 122 EG D+A+PA WK LRCALNKS DF + D + +PYK+Y + P + Q + Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPED 135 Query: 123 GVATAGCVNEVTEMECGRS----EIDELIKEPSV--------DDYMGMIKRSPSP----- 165 AG E E E R + E +K P +G PSP Sbjct: 136 YSFGAG-EEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPP 194 Query: 166 --PEACRSQL--------LPDWWAQQPSTGVPLVTGYTTYDAHHSAFSQMVISFYYGGKL 215 P R L LP A P G L+ H + + I F Y G+ Sbjct: 195 GNPAGFRELLSEVLEPGPLP---ASLPPAGEQLLPD-LLISPHMLPLTDLEIKFQYRGRP 250 Query: 216 VGQATTTCPEGCRLSLSQPGLPGT----KLYGPEGLELVRFPPADAIPSERQRQVTRKLF 271 T + P GCRL SQ L T +L+GP LE VRFP + IPS++QR T +L Sbjct: 251 PRALTISNPHGCRLFYSQ--LEATQEQVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLL 308 Query: 272 GHLERGVLLHSSRQGVFVKRLCQGRVFCSGN-AVVCKGRPNKLERDEVVQVFDTSQFFRE 330 L+RG++L Q ++ RLCQ +VF SG A PN ++R+ ++F F E Sbjct: 309 DVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNE 368 Query: 331 LQQFYNSQGRLPDG-RVVLCFGEEFPDMAPLRSKLILVQIEQLYVRQLAE 379 L F Q P + CFGEE+PD P KLI VQ+ + R L E Sbjct: 369 LILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLE 418 >gi|148833492 interferon regulatory factor 5 isoform c [Homo sapiens] Length = 488 Score = 200 bits (508), Expect = 2e-51 Identities = 148/410 (36%), Positives = 197/410 (48%), Gaps = 46/410 (11%) Query: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 RL+ WL+ Q++S YPGL W N EK +F IPW+HA + +Q+ D +IFKAWA GK+ Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75 Query: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRI-----VPEEEQKCKL 122 EG D+A+PA WK LRCALNKS DF + D + +PYK+Y + P + Q + Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPED 135 Query: 123 GVATAGCVNEVTEMECGRS----EIDELIKEPSV--------DDYMGMIKRSPSP----- 165 AG E E E R + E +K P +G PSP Sbjct: 136 YSFGAG-EEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPP 194 Query: 166 --PEACRSQL--------LPDWWAQQPSTGVPLVTGYTTYDAHHSAFSQMVISFYYGGKL 215 P R L LP A P G L+ H + + I F Y G+ Sbjct: 195 GNPAGFRELLSEVLEPGPLP---ASLPPAGEQLLPD-LLISPHMLPLTDLEIKFQYRGRP 250 Query: 216 VGQATTTCPEGCRLSLSQPGLPGT----KLYGPEGLELVRFPPADAIPSERQRQVTRKLF 271 T + P GCRL SQ L T +L+GP LE VRFP + IPS++QR T +L Sbjct: 251 PRALTISNPHGCRLFYSQ--LEATQEQVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLL 308 Query: 272 GHLERGVLLHSSRQGVFVKRLCQGRVFCSGN-AVVCKGRPNKLERDEVVQVFDTSQFFRE 330 L+RG++L Q ++ RLCQ +VF SG A PN ++R+ ++F F E Sbjct: 309 DVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNE 368 Query: 331 LQQFYNSQGRLPDG-RVVLCFGEEFPDMAPLRSKLILVQIEQLYVRQLAE 379 L F Q P + CFGEE+PD P KLI VQ+ + R L E Sbjct: 369 LILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLE 418 >gi|148833488 interferon regulatory factor 5 isoform c [Homo sapiens] Length = 488 Score = 200 bits (508), Expect = 2e-51 Identities = 148/410 (36%), Positives = 197/410 (48%), Gaps = 46/410 (11%) Query: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 RL+ WL+ Q++S YPGL W N EK +F IPW+HA + +Q+ D +IFKAWA GK+ Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75 Query: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRI-----VPEEEQKCKL 122 EG D+A+PA WK LRCALNKS DF + D + +PYK+Y + P + Q + Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPED 135 Query: 123 GVATAGCVNEVTEMECGRS----EIDELIKEPSV--------DDYMGMIKRSPSP----- 165 AG E E E R + E +K P +G PSP Sbjct: 136 YSFGAG-EEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPP 194 Query: 166 --PEACRSQL--------LPDWWAQQPSTGVPLVTGYTTYDAHHSAFSQMVISFYYGGKL 215 P R L LP A P G L+ H + + I F Y G+ Sbjct: 195 GNPAGFRELLSEVLEPGPLP---ASLPPAGEQLLPD-LLISPHMLPLTDLEIKFQYRGRP 250 Query: 216 VGQATTTCPEGCRLSLSQPGLPGT----KLYGPEGLELVRFPPADAIPSERQRQVTRKLF 271 T + P GCRL SQ L T +L+GP LE VRFP + IPS++QR T +L Sbjct: 251 PRALTISNPHGCRLFYSQ--LEATQEQVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLL 308 Query: 272 GHLERGVLLHSSRQGVFVKRLCQGRVFCSGN-AVVCKGRPNKLERDEVVQVFDTSQFFRE 330 L+RG++L Q ++ RLCQ +VF SG A PN ++R+ ++F F E Sbjct: 309 DVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNE 368 Query: 331 LQQFYNSQGRLPDG-RVVLCFGEEFPDMAPLRSKLILVQIEQLYVRQLAE 379 L F Q P + CFGEE+PD P KLI VQ+ + R L E Sbjct: 369 LILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLE 418 >gi|148833494 interferon regulatory factor 5 isoform d [Homo sapiens] Length = 514 Score = 197 bits (500), Expect = 2e-50 Identities = 144/432 (33%), Positives = 196/432 (45%), Gaps = 64/432 (14%) Query: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 RL+ WL+ Q++S YPGL W N EK +F IPW+HA + +Q+ D +IFKAWA GK+ Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75 Query: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRI-----VPEEEQKCKL 122 EG D+A+PA WK LRCALNKS DF + D + +PYK+Y + P + Q + Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPED 135 Query: 123 GVATAGCVNEVTE----MECGRSEIDELIKEPSVDDYMGMIKRSPSPPEACRSQLLPDWW 178 AG E E M S D + P + Y ++K P + L Sbjct: 136 YSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPY-SLLKEDVKWPPTLQPPTLRPPT 194 Query: 179 AQQPSTGVPLVTGYTTYD------------------------------------------ 196 Q P+ P+V G D Sbjct: 195 LQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDL 254 Query: 197 ---AHHSAFSQMVISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGT----KLYGPEGLEL 249 H + + I F Y G+ T + P GCRL SQ L T +L+GP LE Sbjct: 255 LISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQ--LEATQEQVELFGPISLEQ 312 Query: 250 VRFPPADAIPSERQRQVTRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCSGN-AVVCKG 308 VRFP + IPS++QR T +L L+RG++L Q ++ RLCQ +VF SG A Sbjct: 313 VRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDS 372 Query: 309 RPNKLERDEVVQVFDTSQFFRELQQFYNSQGRLPDG-RVVLCFGEEFPDMAPLRSKLILV 367 PN ++R+ ++F F EL F Q P + CFGEE+PD P KLI V Sbjct: 373 CPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITV 432 Query: 368 QIEQLYVRQLAE 379 Q+ + R L E Sbjct: 433 QVVPVAARLLLE 444 >gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens] Length = 504 Score = 196 bits (499), Expect = 3e-50 Identities = 148/425 (34%), Positives = 197/425 (46%), Gaps = 60/425 (14%) Query: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 RL+ WL+ Q++S YPGL W N EK +F IPW+HA + +Q+ D +IFKAWA GK+ Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75 Query: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRI-----VPEEEQKCKL 122 EG D+A+PA WK LRCALNKS DF + D + +PYK+Y + P + Q + Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPED 135 Query: 123 GVATAGCVNEVTE----MECGRSEIDELIKEPSVDDY----------------------- 155 AG E E M S D + P + Y Sbjct: 136 YSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQPPVV 195 Query: 156 MGMIKRSPSP-------PEACRSQL--------LPDWWAQQPSTGVPLVTGYTTYDAHHS 200 +G PSP P R L LP A P G L+ H Sbjct: 196 LGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP---ASLPPAGEQLLPD-LLISPHML 251 Query: 201 AFSQMVISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGT----KLYGPEGLELVRFPPAD 256 + + I F Y G+ T + P GCRL SQ L T +L+GP LE VRFP + Sbjct: 252 PLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQ--LEATQEQVELFGPISLEQVRFPSPE 309 Query: 257 AIPSERQRQVTRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCSGN-AVVCKGRPNKLER 315 IPS++QR T +L L+RG++L Q ++ RLCQ +VF SG A PN ++R Sbjct: 310 DIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQR 369 Query: 316 DEVVQVFDTSQFFRELQQFYNSQGRLPDG-RVVLCFGEEFPDMAPLRSKLILVQIEQLYV 374 + ++F F EL F Q P + CFGEE+PD P KLI VQ+ + Sbjct: 370 EVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAA 429 Query: 375 RQLAE 379 R L E Sbjct: 430 RLLLE 434 >gi|148833496 interferon regulatory factor 5 isoform b [Homo sapiens] Length = 498 Score = 196 bits (498), Expect = 3e-50 Identities = 148/420 (35%), Positives = 197/420 (46%), Gaps = 56/420 (13%) Query: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 RL+ WL+ Q++S YPGL W N EK +F IPW+HA + +Q+ D +IFKAWA GK+ Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75 Query: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRI-----VPEEEQKCKL 122 EG D+A+PA WK LRCALNKS DF + D + +PYK+Y + P + Q + Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPED 135 Query: 123 GVATAGCVNEVTEMECGRS----EIDELIKEPSV------------------DDYMGMIK 160 AG E E E R + E +K P +G Sbjct: 136 YSFGAG-EEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLRPPTLQPPTLQPPVVLGPPA 194 Query: 161 RSPSP-------PEACRSQL--------LPDWWAQQPSTGVPLVTGYTTYDAHHSAFSQM 205 PSP P R L LP A P G L+ H + + Sbjct: 195 PDPSPLAPPPGNPAGFRELLSEVLEPGPLP---ASLPPAGEQLLPD-LLISPHMLPLTDL 250 Query: 206 VISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGT----KLYGPEGLELVRFPPADAIPSE 261 I F Y G+ T + P GCRL SQ L T +L+GP LE VRFP + IPS+ Sbjct: 251 EIKFQYRGRPPRALTISNPHGCRLFYSQ--LEATQEQVELFGPISLEQVRFPSPEDIPSD 308 Query: 262 RQRQVTRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCSGN-AVVCKGRPNKLERDEVVQ 320 +QR T +L L+RG++L Q ++ RLCQ +VF SG A PN ++R+ + Sbjct: 309 KQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTK 368 Query: 321 VFDTSQFFRELQQFYNSQGRLPDG-RVVLCFGEEFPDMAPLRSKLILVQIEQLYVRQLAE 379 +F F EL F Q P + CFGEE+PD P KLI VQ+ + R L E Sbjct: 369 LFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLE 428 >gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens] Length = 498 Score = 196 bits (498), Expect = 3e-50 Identities = 148/420 (35%), Positives = 197/420 (46%), Gaps = 56/420 (13%) Query: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 RL+ WL+ Q++S YPGL W N EK +F IPW+HA + +Q+ D +IFKAWA GK+ Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75 Query: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRI-----VPEEEQKCKL 122 EG D+A+PA WK LRCALNKS DF + D + +PYK+Y + P + Q + Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPED 135 Query: 123 GVATAGCVNEVTEMECGRS----EIDELIKEPSV------------------DDYMGMIK 160 AG E E E R + E +K P +G Sbjct: 136 YSFGAG-EEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLRPPTLQPPTLQPPVVLGPPA 194 Query: 161 RSPSP-------PEACRSQL--------LPDWWAQQPSTGVPLVTGYTTYDAHHSAFSQM 205 PSP P R L LP A P G L+ H + + Sbjct: 195 PDPSPLAPPPGNPAGFRELLSEVLEPGPLP---ASLPPAGEQLLPD-LLISPHMLPLTDL 250 Query: 206 VISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGT----KLYGPEGLELVRFPPADAIPSE 261 I F Y G+ T + P GCRL SQ L T +L+GP LE VRFP + IPS+ Sbjct: 251 EIKFQYRGRPPRALTISNPHGCRLFYSQ--LEATQEQVELFGPISLEQVRFPSPEDIPSD 308 Query: 262 RQRQVTRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCSGN-AVVCKGRPNKLERDEVVQ 320 +QR T +L L+RG++L Q ++ RLCQ +VF SG A PN ++R+ + Sbjct: 309 KQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTK 368 Query: 321 VFDTSQFFRELQQFYNSQGRLPDG-RVVLCFGEEFPDMAPLRSKLILVQIEQLYVRQLAE 379 +F F EL F Q P + CFGEE+PD P KLI VQ+ + R L E Sbjct: 369 LFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLE 428 >gi|4504725 interferon regulatory factor 3 [Homo sapiens] Length = 427 Score = 129 bits (323), Expect = 7e-30 Identities = 109/400 (27%), Positives = 172/400 (43%), Gaps = 54/400 (13%) Query: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 R+ WL+ Q+D G+ W N+ ++ FRIPWKH +QD QE D IF+AWA G + Sbjct: 7 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYV 65 Query: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKCKLGVATA 127 G DK + TWK R ALN+ DRS+ D +P+K+Y V GV Sbjct: 66 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSK-DPHDPHKIYEFV-------NSGVGDF 117 Query: 128 GCVNEVTEMECGRSEIDELIKEPSVDDYMGMIKRSPSP----------PEACRSQLLPDW 177 + + G S D +E +D+ +G + +P P PE C L Sbjct: 118 SQPDTSPDTNGGGSTSD--TQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPL---- 171 Query: 178 WAQQPSTGVPLVTGYTTYDAHHSAFSQMV---------ISFYYGGKLVGQATTTCPEGCR 228 + PS P T + + +++ ++ +Y G+ V Q T +CPEG R Sbjct: 172 --RSPSLDNP--TPFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLR 227 Query: 229 LSLSQPG---LPGTKLYGPEGLELVRFPPADAIPSERQRQVTRKLFGHLERGVLLHSSRQ 285 L S+ G LPG + P+ P ++ R + L G+ L + Q Sbjct: 228 LVGSEVGDRTLPGWPVTLPD--------PGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQ 279 Query: 286 GVFVKRLCQGRVFCSGNAVVC----KGRPNKLERDEVVQVFDTSQFFRELQQFYNSQGRL 341 ++ +RL + + + + G ++ +D+ VFD F +L F GR Sbjct: 280 WLWAQRLGHCHTYWAVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRS 339 Query: 342 PDGRVVLCFGEEFPDMAPLRSKLILVQIEQLYVRQLAEEA 381 P + C GE +P P +L++V++ +R L E A Sbjct: 340 PRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMA 379 >gi|4504721 interferon regulatory factor 1 [Homo sapiens] Length = 325 Score = 118 bits (295), Expect = 1e-26 Identities = 56/140 (40%), Positives = 87/140 (62%), Gaps = 4/140 (2%) Query: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 R+R WL QI+S+ PGLIW N+E+ +F+IPWKHA K ++ DA +F++WA+ G++K Sbjct: 7 RMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYK 66 Query: 69 EGDK-AEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVP---EEEQKCKLGV 124 G+K +P TWK RCA+N PD EEV D+S+ S +VYR++P + ++K + Sbjct: 67 AGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQRKERKSK 126 Query: 125 ATAGCVNEVTEMECGRSEID 144 ++ ++ CG S D Sbjct: 127 SSRDAKSKAKRKSCGDSSPD 146 >gi|153082752 interferon regulatory factor 2 [Homo sapiens] Length = 349 Score = 117 bits (294), Expect = 2e-26 Identities = 54/116 (46%), Positives = 76/116 (65%), Gaps = 1/116 (0%) Query: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 R+R WL EQI+S+ PGL W N+EK +F+IPW HA + ++ E DA +F+ WA+ GK + Sbjct: 7 RMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGKHQ 66 Query: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKCKLG 123 G DK +P TWK RCA+N PD EEV D+S + ++VYR++P E+ K G Sbjct: 67 PGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSKKG 122 >gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens] Length = 516 Score = 89.0 bits (219), Expect = 8e-18 Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 12/114 (10%) Query: 12 QWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKF---- 67 +WL+ +I S Y GL W +E ++ FR+PWKH ++D + E DA IFKAWAV +G++ Sbjct: 29 EWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLS-EADARIFKAWAVARGRWPPSS 87 Query: 68 ------KEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPE 115 E + AE A WKT RCAL + F + D S D ++P+KVY + E Sbjct: 88 RGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSG-DPADPHKVYALSRE 140 Score = 46.6 bits (109), Expect = 4e-05 Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 10/169 (5%) Query: 207 ISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGTKLYGPEGLELVRFPPADAIPSERQRQV 266 ++ Y G+ V Q P C P P + P+ V FP +P ++Q + Sbjct: 304 VTIMYKGRTVLQKVVGHPS-CTFLYGPPD-PAVRATDPQQ---VAFPSPAELPDQKQLRY 358 Query: 267 TRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCSGNAVVCKGRPNK----LERDEVVQVF 322 T +L H+ G+ L ++ +R+ + +V+ P+ L R+ +F Sbjct: 359 TEELLRHVAPGLHLELRGPQLWARRMGKCKVYWEVGGPPGSASPSTPACLLPRNCDTPIF 418 Query: 323 DTSQFFRELQQFYNSQGR-LPDGRVVLCFGEEFPDMAPLRSKLILVQIE 370 D FF+EL +F Q R P + L FG++ P L+LV++E Sbjct: 419 DFRVFFQELVEFRARQRRGSPRYTIYLGFGQDLSAGRPKEKSLVLVKLE 467 >gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens] Length = 503 Score = 89.0 bits (219), Expect = 8e-18 Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 12/114 (10%) Query: 12 QWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKF---- 67 +WL+ +I S Y GL W +E ++ FR+PWKH ++D + E DA IFKAWAV +G++ Sbjct: 16 EWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLS-EADARIFKAWAVARGRWPPSS 74 Query: 68 ------KEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPE 115 E + AE A WKT RCAL + F + D S D ++P+KVY + E Sbjct: 75 RGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSG-DPADPHKVYALSRE 127 Score = 46.6 bits (109), Expect = 4e-05 Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 10/169 (5%) Query: 207 ISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGTKLYGPEGLELVRFPPADAIPSERQRQV 266 ++ Y G+ V Q P C P P + P+ V FP +P ++Q + Sbjct: 291 VTIMYKGRTVLQKVVGHPS-CTFLYGPPD-PAVRATDPQQ---VAFPSPAELPDQKQLRY 345 Query: 267 TRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCSGNAVVCKGRPNK----LERDEVVQVF 322 T +L H+ G+ L ++ +R+ + +V+ P+ L R+ +F Sbjct: 346 TEELLRHVAPGLHLELRGPQLWARRMGKCKVYWEVGGPPGSASPSTPACLLPRNCDTPIF 405 Query: 323 DTSQFFRELQQFYNSQGR-LPDGRVVLCFGEEFPDMAPLRSKLILVQIE 370 D FF+EL +F Q R P + L FG++ P L+LV++E Sbjct: 406 DFRVFFQELVEFRARQRRGSPRYTIYLGFGQDLSAGRPKEKSLVLVKLE 454 >gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens] Length = 474 Score = 89.0 bits (219), Expect = 8e-18 Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 12/114 (10%) Query: 12 QWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKF---- 67 +WL+ +I S Y GL W +E ++ FR+PWKH ++D + E DA IFKAWAV +G++ Sbjct: 16 EWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLS-EADARIFKAWAVARGRWPPSS 74 Query: 68 ------KEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPE 115 E + AE A WKT RCAL + F + D S D ++P+KVY + E Sbjct: 75 RGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSG-DPADPHKVYALSRE 127 Score = 46.6 bits (109), Expect = 4e-05 Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 10/169 (5%) Query: 207 ISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGTKLYGPEGLELVRFPPADAIPSERQRQV 266 ++ Y G+ V Q P C P P + P+ V FP +P ++Q + Sbjct: 262 VTIMYKGRTVLQKVVGHPS-CTFLYGPPD-PAVRATDPQQ---VAFPSPAELPDQKQLRY 316 Query: 267 TRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCSGNAVVCKGRPNK----LERDEVVQVF 322 T +L H+ G+ L ++ +R+ + +V+ P+ L R+ +F Sbjct: 317 TEELLRHVAPGLHLELRGPQLWARRMGKCKVYWEVGGPPGSASPSTPACLLPRNCDTPIF 376 Query: 323 DTSQFFRELQQFYNSQGR-LPDGRVVLCFGEEFPDMAPLRSKLILVQIE 370 D FF+EL +F Q R P + L FG++ P L+LV++E Sbjct: 377 DFRVFFQELVEFRARQRRGSPRYTIYLGFGQDLSAGRPKEKSLVLVKLE 425 >gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens] Length = 362 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 9/58 (15%) Query: 17 QIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFKEGDKAE 74 QI+S Y GL WE+ K++FRIPWKH KQ Y +AW V KGK EG E Sbjct: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQGY---------QAWMVHKGKHLEGTNKE 64 >gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens] Length = 362 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 9/58 (15%) Query: 17 QIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFKEGDKAE 74 QI+S Y GL WE+ K++FRIPWKH KQ Y +AW V KGK EG E Sbjct: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQGY---------QAWMVHKGKHLEGTNKE 64 >gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo sapiens] Length = 362 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 9/58 (15%) Query: 17 QIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFKEGDKAE 74 QI+S Y GL WE+ K++FRIPWKH KQ Y +AW V KGK EG E Sbjct: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQGY---------QAWMVHKGKHLEGTNKE 64 >gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] Length = 4377 Score = 31.6 bits (70), Expect = 1.4 Identities = 31/151 (20%), Positives = 67/151 (44%), Gaps = 16/151 (10%) Query: 235 GLPGTKLYGPE--GLELVRFPPADAIPSERQRQVTRKLFG------HLERGVLLH----- 281 G P ++L G + E + P I S+ + V+ G H ++ +LH Sbjct: 2489 GPPSSELQGSDKRSREKIATAPKKEILSKIYKDVSENGVGKVSKDEHFDKVTVLHYSGNV 2548 Query: 282 SSRQGVFVKRLCQGRVFCSGNAVVCKGRPNKLERDEVVQVFDTSQFFRELQQFYNSQGRL 341 SS + R + R+ ++ + R ++ ++ ++ + SQFFR+ + N + + Sbjct: 2549 SSPKHAMWMRFTEDRLDRGREKLIYEDRVDRTVKEAEEKLTEVSQFFRDKTEKLNDELQS 2608 Query: 342 PDGRVVLCFGEEFPDMAPLRS---KLILVQI 369 P+ + G+E+ +P S K++L ++ Sbjct: 2609 PEKKARPKNGKEYSSQSPTSSSPEKVLLTEL 2639 >gi|14149680 extended synaptotagmin-like protein 1 [Homo sapiens] Length = 1104 Score = 31.2 bits (69), Expect = 1.9 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 13/90 (14%) Query: 104 SEPYKVYRI--------VPEEEQKCKLGVATAGCVNEVTEMECGRSEIDELIKEPSVDDY 155 S+PY + R+ V +EE + G V+EV E E++ K+P DD+ Sbjct: 356 SDPYALVRLGTQTFCSRVIDEELNPQWGETYEVMVHEVPGQEI---EVEVFDKDPDKDDF 412 Query: 156 MGMIKRSPSPPEACRSQLLPDWWAQQPSTG 185 +G +K + ++ +L DW+ Q G Sbjct: 413 LGRMKLDVG--KVLQASVLDDWFPLQGGQG 440 >gi|9256590 protocadherin alpha 5 isoform 1 precursor [Homo sapiens] Length = 936 Score = 30.8 bits (68), Expect = 2.4 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 273 HLERGVLLHSSRQGVFVKRLCQGRVFCSGNAVVCKGRPNKLERDEVVQVFDTS----QFF 328 +L+ G+L +SR + + LC+ R CS + V RP ++ EV V D + +F Sbjct: 77 NLQNGILFVNSR--IDREELCRRRAECSIHLEVIVDRPLQVFHVEVA-VKDINDNPPRFS 133 Query: 329 RELQQFYNSQGRLPDGRVVL 348 R+ Q+ + + R+PD R L Sbjct: 134 RQEQRLFILESRMPDSRFPL 153 >gi|14165416 protocadherin alpha 5 isoform 2 precursor [Homo sapiens] Length = 816 Score = 30.8 bits (68), Expect = 2.4 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 273 HLERGVLLHSSRQGVFVKRLCQGRVFCSGNAVVCKGRPNKLERDEVVQVFDTS----QFF 328 +L+ G+L +SR + + LC+ R CS + V RP ++ EV V D + +F Sbjct: 77 NLQNGILFVNSR--IDREELCRRRAECSIHLEVIVDRPLQVFHVEVA-VKDINDNPPRFS 133 Query: 329 RELQQFYNSQGRLPDGRVVL 348 R+ Q+ + + R+PD R L Sbjct: 134 RQEQRLFILESRMPDSRFPL 153 >gi|25777608 NLR family member X1 isoform 1 [Homo sapiens] Length = 975 Score = 30.0 bits (66), Expect = 4.2 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 5/52 (9%) Query: 370 EQLYVRQLAEEAGKSC-GAGSVMQAPEEPPPDQVFRMFP----DICASHQRS 416 E Y + ++ G S G + P+EPP D+VF +FP + ++H R+ Sbjct: 586 EDYYNDDVLDQMGASILGVEGPRRHPDEPPEDEVFELFPMFMGGLLSAHNRA 637 >gi|25777610 NLR family member X1 isoform 2 [Homo sapiens] Length = 921 Score = 30.0 bits (66), Expect = 4.2 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 5/52 (9%) Query: 370 EQLYVRQLAEEAGKSC-GAGSVMQAPEEPPPDQVFRMFP----DICASHQRS 416 E Y + ++ G S G + P+EPP D+VF +FP + ++H R+ Sbjct: 586 EDYYNDDVLDQMGASILGVEGPRRHPDEPPEDEVFELFPMFMGGLLSAHNRA 637 >gi|157364934 fibrosin [Homo sapiens] Length = 460 Score = 30.0 bits (66), Expect = 4.2 Identities = 18/72 (25%), Positives = 25/72 (34%), Gaps = 5/72 (6%) Query: 116 EEQKCKLGVATAGCVNEVTEMECGRSEIDELIKEPSVDDYMGMIKRSPSPPEACRSQLLP 175 +E+ A A G + L + P ++G PSPP+ C L P Sbjct: 308 KEEAAAAAAAAAAAAAAAAAAATGPQGLHLLFERPRPPPFLG-----PSPPDRCAGFLEP 362 Query: 176 DWWAQQPSTGVP 187 W A P P Sbjct: 363 TWLAAPPRLARP 374 >gi|49355778 inter-alpha trypsin inhibitor heavy chain precursor 5 isoform 3 [Homo sapiens] Length = 702 Score = 29.6 bits (65), Expect = 5.5 Identities = 19/51 (37%), Positives = 24/51 (47%) Query: 18 IDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 I +Y G I E E+KS R+ K + N E IF+A AV K K Sbjct: 102 IGDKVYQGEITEREKKSGDRVKEKRNKTTEENGEKGTEIFRASAVIPSKDK 152 >gi|153945780 inter-alpha trypsin inhibitor heavy chain precursor 5 isoform 1 [Homo sapiens] Length = 956 Score = 29.6 bits (65), Expect = 5.5 Identities = 19/51 (37%), Positives = 24/51 (47%) Query: 18 IDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68 I +Y G I E E+KS R+ K + N E IF+A AV K K Sbjct: 102 IGDKVYQGEITEREKKSGDRVKEKRNKTTEENGEKGTEIFRASAVIPSKDK 152 >gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4 [Homo sapiens] Length = 809 Score = 29.3 bits (64), Expect = 7.1 Identities = 15/42 (35%), Positives = 20/42 (47%) Query: 185 GVPLVTGYTTYDAHHSAFSQMVISFYYGGKLVGQATTTCPEG 226 GVP T Y H+ A + Y G +L+G+ T TC G Sbjct: 661 GVPENGYQTLYKHHYQAGESLRFFCYEGFELIGEVTITCVPG 702 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.136 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,839,253 Number of Sequences: 37866 Number of extensions: 906628 Number of successful extensions: 2239 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 2147 Number of HSP's gapped (non-prelim): 55 length of query: 426 length of database: 18,247,518 effective HSP length: 105 effective length of query: 321 effective length of database: 14,271,588 effective search space: 4581179748 effective search space used: 4581179748 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.