Guide to the Human Genome
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Name: ITIH5 Sequence: fasta or formatted (956aa) NCBI GI: 153945780
Description:

inter-alpha trypsin inhibitor heavy chain precursor 5 isoform 1

Referenced in:

Protease Inhibitors

Other entries for this name:
alt prot [742aa] inter-alpha trypsin inhibitor heavy chain precursor 5 isoform 2
alt prot [702aa] inter-alpha trypsin inhibitor heavy chain precursor 5 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         52           3
 C cysteine            0.9          9           1
 D aspartate           5.6         54           2
 E glutamate           5.5         53           3
 F phenylalanine       3.8         36           2
 G glycine             8.2         78           2
 H histidine           2.7         26           2
 I isoleucine          6.7         64           3
 K lysine              5.4         52           2
 L leucine            10.1         97           4
 M methionine          1.4         13           1
 N asparagine          4.1         39           2
 P proline             5.6         54           3
 Q glutamine           4.9         47           2
 R arginine            6.3         60           2
 S serine              7.2         69           2
 T threonine           5.5         53           2
 V valine              7.3         70           3
 W tryptophan          0.8          8           1
 Y tyrosine            2.3         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inter-alpha trypsin inhibitor heavy chain precursor... 
ITIH5                 0.777   inter-alpha trypsin inhibitor heavy chain precursor...
ITIH5                 0.699   inter-alpha trypsin inhibitor heavy chain precursor ...
ITIH2                 0.247   inter-alpha globulin inhibitor H2 polypeptide 
ITIH3                 0.246   inter-alpha (globulin) inhibitor H3 preproprotein [...
ITIH1                 0.217   inter-alpha (globulin) inhibitor H1 
ITIH5L                0.207   inter-alpha (globulin) inhibitor H5-like 
ITIH4                 0.194   inter-alpha (globulin) inhibitor H4 
VWA5B1                0.023   von Willebrand factor A domain containing 5B1 [Homo...
VWA3A                 0.013   von Willebrand factor A domain containing 3A 
CACNA2D3              0.012   calcium channel, voltage-dependent, alpha 2/delta 3 ...
CACHD1                0.011   cache domain containing 1 
CACNA2D4              0.010   voltage-gated calcium channel alpha(2)delta-4 subun...
VWA3B                 0.010   von Willebrand factor A domain containing 3B 
VWA5B2                0.006   von Willebrand factor A domain containing 5B2 [Homo...
LOC338756             0.006   PREDICTED: similar to Nucleolar protein 5A 
LOC338756             0.006   PREDICTED: similar to Nucleolar protein 5A 
LOC338756             0.006   PREDICTED: hypothetical protein 
TP53I13               0.005   tumor protein p53 inducible protein 13 
COL20A1               0.005   collagen, type XX, alpha 1 
ITGAX                 0.004   integrin alpha X precursor 
LOC100127899          0.004   PREDICTED: hypothetical protein 
LOC100134498          0.004   PREDICTED: hypothetical protein 
PLCG1                 0.004   phospholipase C, gamma 1 isoform a 
PLCG1                 0.004   phospholipase C, gamma 1 isoform b 
EDC3                  0.003   enhancer of mRNA decapping 3 
EDC3                  0.003   enhancer of mRNA decapping 3 
EDC3                  0.003   enhancer of mRNA decapping 3 
RPL3L                 0.003   ribosomal protein L3-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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