Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ITIH5 Sequence: fasta or formatted (702aa) NCBI GI: 49355778
Description:

inter-alpha trypsin inhibitor heavy chain precursor 5 isoform 3

Referenced in:

Protease Inhibitors

Other entries for this name:
alt prot [742aa] inter-alpha trypsin inhibitor heavy chain precursor 5 isoform 2
alt prot [956aa] inter-alpha trypsin inhibitor heavy chain precursor 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         36           3
 C cysteine            0.7          5           1
 D aspartate           5.4         38           2
 E glutamate           6.3         44           3
 F phenylalanine       4.3         30           2
 G glycine             7.5         53           2
 H histidine           2.1         15           2
 I isoleucine          7.1         50           3
 K lysine              5.8         41           2
 L leucine             9.8         69           4
 M methionine          1.7         12           1
 N asparagine          3.6         25           2
 P proline             5.3         37           3
 Q glutamine           4.7         33           2
 R arginine            7.3         51           2
 S serine              8.1         57           2
 T threonine           5.7         40           2
 V valine              6.7         47           2
 W tryptophan          0.6          4           1
 Y tyrosine            2.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inter-alpha trypsin inhibitor heavy chain precursor ... 
ITIH5                 0.967   inter-alpha trypsin inhibitor heavy chain precursor...
ITIH5                 0.659   inter-alpha trypsin inhibitor heavy chain precursor...
ITIH5L                0.287   inter-alpha (globulin) inhibitor H5-like 
ITIH4                 0.269   inter-alpha (globulin) inhibitor H4 
ITIH3                 0.258   inter-alpha (globulin) inhibitor H3 preproprotein [...
ITIH2                 0.256   inter-alpha globulin inhibitor H2 polypeptide 
ITIH1                 0.214   inter-alpha (globulin) inhibitor H1 
VWA5B1                0.032   von Willebrand factor A domain containing 5B1 [Homo...
VWA3A                 0.018   von Willebrand factor A domain containing 3A 
CACNA2D3              0.016   calcium channel, voltage-dependent, alpha 2/delta 3 ...
CACHD1                0.015   cache domain containing 1 
CACNA2D4              0.014   voltage-gated calcium channel alpha(2)delta-4 subun...
VWA3B                 0.013   von Willebrand factor A domain containing 3B 
VWA5B2                0.008   von Willebrand factor A domain containing 5B2 [Homo...
LOC338756             0.008   PREDICTED: similar to Nucleolar protein 5A 
LOC338756             0.008   PREDICTED: similar to Nucleolar protein 5A 
LOC338756             0.008   PREDICTED: hypothetical protein 
TP53I13               0.007   tumor protein p53 inducible protein 13 
COL20A1               0.007   collagen, type XX, alpha 1 
ITGAX                 0.006   integrin alpha X precursor 
PLCG1                 0.005   phospholipase C, gamma 1 isoform a 
PLCG1                 0.005   phospholipase C, gamma 1 isoform b 
EDC3                  0.004   enhancer of mRNA decapping 3 
EDC3                  0.004   enhancer of mRNA decapping 3 
EDC3                  0.004   enhancer of mRNA decapping 3 
RPL3L                 0.004   ribosomal protein L3-like 
COL29A1               0.004   collagen, type XXIX, alpha 1 
IRF8                  0.004   interferon regulatory factor 8 
ATRX                  0.004   transcriptional regulator ATRX isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press