Guide to the Human Genome
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Name: CRH Sequence: fasta or formatted (196aa) NCBI GI: 4503041
Description:

corticotropin releasing hormone precursor

Referenced in:

Hypothalamus
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         22           2
 C cysteine            1.0          2           1
 D aspartate           1.5          3           1
 E glutamate           7.1         14           2
 F phenylalanine       3.1          6           2
 G glycine             6.1         12           2
 H histidine           2.0          4           1
 I isoleucine          1.5          3           2
 K lysine              1.5          3           1
 L leucine            16.8         33           3
 M methionine          2.0          4           1
 N asparagine          2.6          5           1
 P proline            12.8         25           3
 Q glutamine           8.2         16           2
 R arginine            9.7         19           2
 S serine              7.7         15           2
 T threonine           1.0          2           1
 V valine              3.6          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   corticotropin releasing hormone precursor 
UCN                   0.074   urocortin preproprotein 
KIAA0182              0.049   genetic suppressor element 1 isoform 2 
KIAA0182              0.049   genetic suppressor element 1 isoform 1 
GGN                   0.041   gametogenetin 
SAMD1                 0.038   sterile alpha motif domain containing 1 
CREBBP                0.038   CREB binding protein isoform b 
CREBBP                0.038   CREB binding protein isoform a 
SFPQ                  0.036   splicing factor proline/glutamine rich (polypyrimidin...
MEF2D                 0.033   myocyte enhancer factor 2D 
KHSRP                 0.033   KH-type splicing regulatory protein 
MYST3                 0.030   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.030   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.030   MYST histone acetyltransferase (monocytic leukemia)...
LOC100128440          0.027   PREDICTED: hypothetical protein 
LOC100128440          0.027   PREDICTED: hypothetical protein 
LOC100128440          0.027   PREDICTED: hypothetical protein 
CDX2                  0.027   caudal type homeobox 2 
ZFHX2                 0.027   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.027   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.027   PREDICTED: zinc finger homeobox 2 
RBM20                 0.025   RNA binding motif protein 20 
SHANK1                0.025   SH3 and multiple ankyrin repeat domains 1 
FOXC1                 0.025   forkhead box C1 
WIPF3                 0.025   WAS/WASL interacting protein family, member 3 [Homo...
C4orf48               0.022   hypothetical protein LOC401115 
IER5                  0.022   immediate early response 5 
TNRC6A                0.022   trinucleotide repeat containing 6A 
PPP1R13L              0.022   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.022   protein phosphatase 1, regulatory subunit 13 like [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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