Guide to the Human Genome
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Name: EDIL3 Sequence: fasta or formatted (480aa) NCBI GI: 31317224
Description:

EGF-like repeats and discoidin I-like domains-containing protein 3

Referenced in:

Epidermal Growth Factor
Mammary Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         23           2
 C cysteine            5.0         24           1
 D aspartate           5.0         24           1
 E glutamate           5.6         27           3
 F phenylalanine       3.1         15           1
 G glycine             9.6         46           2
 H histidine           2.3         11           1
 I isoleucine          6.2         30           2
 K lysine              5.6         27           2
 L leucine             6.0         29           2
 M methionine          1.9          9           1
 N asparagine          6.0         29           2
 P proline             5.6         27           2
 Q glutamine           4.6         22           2
 R arginine            5.0         24           2
 S serine              6.0         29           2
 T threonine           5.6         27           1
 V valine              5.2         25           2
 W tryptophan          2.5         12           1
 Y tyrosine            4.2         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EGF-like repeats and discoidin I-like domains-contai... 
MFGE8                 0.369   milk fat globule-EGF factor 8 protein isoform a [Ho...
MFGE8                 0.283   milk fat globule-EGF factor 8 protein isoform b [Ho...
F5                    0.239   coagulation factor V precursor 
F8                    0.228   coagulation factor VIII isoform a precursor 
F8                    0.157   coagulation factor VIII isoform b precursor 
NRP2                  0.146   neuropilin 2 isoform 3 precursor 
NRP2                  0.146   neuropilin 2 isoform 5 precursor 
NRP2                  0.146   neuropilin 2 isoform 1 precursor 
NRP2                  0.146   neuropilin 2 isoform 4 precursor 
NRP2                  0.146   neuropilin 2 isoform 2 precursor 
NRP1                  0.143   neuropilin 1 isoform c 
NRP1                  0.143   neuropilin 1 isoform b 
NRP1                  0.143   neuropilin 1 isoform a 
NRP2                  0.121   neuropilin 2 isoform 6 precursor 
DCBLD2                0.113   discoidin, CUB and LCCL domain containing 2 
NOTCH2                0.090   notch 2 preproprotein 
NOTCH1                0.086   notch1 preproprotein 
NOTCH3                0.082   Notch homolog 3 
DLL1                  0.081   delta-like 1 
FAT3                  0.080   FAT tumor suppressor homolog 3 
SNED1                 0.080   6720455I24Rik homolog 
RS1                   0.079   X-linked juvenile retinoschisis protein precursor [H...
SVEP1                 0.079   polydom 
JAG1                  0.077   jagged 1 precursor 
DLL3                  0.077   delta-like 3 protein isoform 1 precursor 
DLL3                  0.077   delta-like 3 protein isoform 2 precursor 
DCBLD1                0.077   discoidin, CUB and LCCL domain containing 1 
DLL4                  0.076   delta-like 4 protein precursor 
AEBP1                 0.076   adipocyte enhancer binding protein 1 precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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