Guide to the Human Genome
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Name: CDC45L Sequence: fasta or formatted (566aa) NCBI GI: 4502713
Description:

CDC45-like

Referenced in:

Additional Cell Cycle Functions
Replication Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         30           2
 C cysteine            2.1         12           1
 D aspartate           7.6         43           3
 E glutamate           7.8         44           3
 F phenylalanine       5.7         32           2
 G glycine             3.4         19           1
 H histidine           3.5         20           1
 I isoleucine          3.9         22           1
 K lysine              5.5         31           2
 L leucine            11.7         66           2
 M methionine          3.4         19           1
 N asparagine          3.2         18           1
 P proline             2.5         14           2
 Q glutamine           5.1         29           2
 R arginine            5.7         32           3
 S serine              8.3         47           2
 T threonine           4.8         27           1
 V valine              6.9         39           2
 W tryptophan          1.4          8           2
 Y tyrosine            2.5         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CDC45-like 
CLSPN                 0.009   claspin 
MYT1                  0.009   myelin transcription factor 1 
SKAP1                 0.009   src kinase associated phosphoprotein 1 isoform 1 [H...
EHMT2                 0.008   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.008   euchromatic histone-lysine N-methyltransferase 2 is...
SKAP1                 0.008   src kinase associated phosphoprotein 1 isoform 2 [H...
KIAA1211              0.008   hypothetical protein LOC57482 
APP                   0.007   amyloid beta A4 protein isoform c precursor 
APP                   0.007   amyloid beta A4 protein isoform b precursor 
APP                   0.007   amyloid beta A4 protein isoform a precursor 
APP                   0.007   amyloid beta A4 protein isoform e precursor 
APP                   0.007   amyloid beta A4 protein isoform f precursor 
RYR1                  0.007   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.007   skeletal muscle ryanodine receptor isoform 1 
CHD3                  0.007   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.007   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.007   chromodomain helicase DNA binding protein 3 isoform...
KIAA0182              0.007   genetic suppressor element 1 isoform 2 
KIAA0182              0.007   genetic suppressor element 1 isoform 1 
CLSTN1                0.006   calsyntenin 1 isoform 1 
CLSTN1                0.006   calsyntenin 1 isoform 2 
HSP90AB1              0.006   heat shock 90kDa protein 1, beta 
HNRNPUL2              0.006   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
ANP32A                0.006   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
C2orf40               0.006   esophageal cancer related gene 4 protein 
KIF21A                0.006   kinesin family member 21A 
ESF1                  0.006   ABT1-associated protein 
CDC2L2                0.005   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.005   cell division cycle 2-like 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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