Search of human proteins with 42794271

Search of human proteins with 42794271

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42794271 iodotyrosine dehalogenase 1 [Homo sapiens]
         (289 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42794271 iodotyrosine dehalogenase 1 [Homo sapiens]                588   e-168
gi|221219020 NYD-SP11 protein [Homo sapiens]                           35   0.10 
gi|110349719 titin isoform N2-A [Homo sapiens]                         34   0.17 
gi|60498973 myelin transcription factor 1-like [Homo sapiens]          33   0.38 
gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens]                 32   0.50 
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)...    32   0.65 
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    32   0.85 
gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ...    31   1.1  
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ...    31   1.1  
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ...    31   1.1  
gi|148746195 trichohyalin [Homo sapiens]                               30   1.9  
gi|57634514 SPANX-N2 protein [Homo sapiens]                            30   1.9  
gi|39995078 hypothetical protein LOC60684 isoform b [Homo sapiens]     30   1.9  
gi|39995076 hypothetical protein LOC60684 isoform a [Homo sapiens]     30   1.9  
gi|87298939 hypothetical protein LOC131831 [Homo sapiens]              30   2.5  
gi|115527076 src kinase associated phosphoprotein 1 isoform 2 [H...    30   2.5  
gi|115527074 src kinase associated phosphoprotein 1 isoform 1 [H...    30   2.5  
gi|156104874 envoplakin [Homo sapiens]                                 30   3.2  
gi|41350212 bromodomain containing 7 [Homo sapiens]                    30   3.2  
gi|50897284 peptidyl-tRNA hydrolase 1 homolog [Homo sapiens]           30   3.2  
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom...    29   4.2  
gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]    29   4.2  
gi|70608155 phosphodiesterase 3A [Homo sapiens]                        29   4.2  
gi|148612805 pigeon homolog [Homo sapiens]                             29   4.2  
gi|196259796 hypothetical protein LOC375484 [Homo sapiens]             29   5.5  
gi|148368962 NKF3 kinase family member [Homo sapiens]                  29   5.5  
gi|155030185 hypothetical protein LOC55726 [Homo sapiens]              29   5.5  
gi|5174593 melatonin receptor 1A [Homo sapiens]                        28   7.2  
gi|42740903 MTERF domain containing 2 [Homo sapiens]                   28   9.4  
gi|122056619 LIM domain binding 3 isoform 4 [Homo sapiens]             28   9.4  

>gi|42794271 iodotyrosine dehalogenase 1 [Homo sapiens]
          Length = 289

 Score =  588 bits (1516), Expect = e-168
 Identities = 289/289 (100%), Positives = 289/289 (100%)

Query: 1   MYFLTPILVAILCILVVWIFKNADRSMEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEED 60
           MYFLTPILVAILCILVVWIFKNADRSMEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEED
Sbjct: 1   MYFLTPILVAILCILVVWIFKNADRSMEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEED 60

Query: 61  ADEWQESEENVEHIPFSHNHYPEKEMVKRSQEFYELLNKRRSVRFISNEQVPMEVIDNVI 120
           ADEWQESEENVEHIPFSHNHYPEKEMVKRSQEFYELLNKRRSVRFISNEQVPMEVIDNVI
Sbjct: 61  ADEWQESEENVEHIPFSHNHYPEKEMVKRSQEFYELLNKRRSVRFISNEQVPMEVIDNVI 120

Query: 121 RTAGTAPSGAHTEPWTFVVVKDPDVKHKIRKIIEEEEEINYMKRMGHRWVTDLKKLRTNW 180
           RTAGTAPSGAHTEPWTFVVVKDPDVKHKIRKIIEEEEEINYMKRMGHRWVTDLKKLRTNW
Sbjct: 121 RTAGTAPSGAHTEPWTFVVVKDPDVKHKIRKIIEEEEEINYMKRMGHRWVTDLKKLRTNW 180

Query: 181 IKEYLDTAPILILIFKQVHGFAANGKKKVHYYNEISVSIACGILLAALQNAGLVTVTTTP 240
           IKEYLDTAPILILIFKQVHGFAANGKKKVHYYNEISVSIACGILLAALQNAGLVTVTTTP
Sbjct: 181 IKEYLDTAPILILIFKQVHGFAANGKKKVHYYNEISVSIACGILLAALQNAGLVTVTTTP 240

Query: 241 LNCGPRLRVLLGRPAHEKLLMLLPVGYPSKEATVPDLKRKPLDQIMVTV 289
           LNCGPRLRVLLGRPAHEKLLMLLPVGYPSKEATVPDLKRKPLDQIMVTV
Sbjct: 241 LNCGPRLRVLLGRPAHEKLLMLLPVGYPSKEATVPDLKRKPLDQIMVTV 289


>gi|221219020 NYD-SP11 protein [Homo sapiens]
          Length = 2873

 Score = 34.7 bits (78), Expect = 0.10
 Identities = 18/84 (21%), Positives = 41/84 (48%)

Query: 21   KNADRSMEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEEDADEWQESEENVEHIPFSHNH 80
            K  ++  E+KK + + + +      E++ +  +   +EE+ +   + EE  E        
Sbjct: 2278 KQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEV 2337

Query: 81   YPEKEMVKRSQEFYELLNKRRSVR 104
              EKE++K+ ++F     +R+S+R
Sbjct: 2338 DREKEILKKEKQFKLQEQRRKSLR 2361


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 24/137 (17%)

Query: 20   FKNADRSMEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEEDADEWQESEENVEHIPFSHN 79
            ++  D   E+ K E +       W +ED ++  + ++ EE  DE +E  E          
Sbjct: 9094 YEEPDEDYEEIKVEAKKEVHEE-W-EEDFEEGQEYYEREEGYDEGEEEWEEA-------- 9143

Query: 80   HYPEKEMVKRSQEFYELLNKRRSVRFISNEQVP-------MEVIDNVIRTAGTAPSGAHT 132
             Y E+E+++  +E YE  ++R+    +  ++ P         VI+ + +T+         
Sbjct: 9144 -YQEREVIQVQKEVYEESHERKVPAKVPEKKAPPPPKVIKKPVIEKIEKTS------RRM 9196

Query: 133  EPWTFVVVKDPDVKHKI 149
            E     V K P+V  KI
Sbjct: 9197 EEEKVQVTKVPEVSKKI 9213


>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
          Length = 1184

 Score = 32.7 bits (73), Expect = 0.38
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 45  DEDLKDSSDLHQAEEDADEWQESEENVEHIPFSHN 79
           DED +D  D  + EE+ +E +E EEN +H    HN
Sbjct: 143 DEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHN 177


>gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens]
          Length = 775

 Score = 32.3 bits (72), Expect = 0.50
 Identities = 24/149 (16%), Positives = 65/149 (43%), Gaps = 20/149 (13%)

Query: 55  HQAEEDADEWQESEENVEHIPFSHNHYPEKEMVKRSQEFYELLNKR--RSVRFISNEQVP 112
           HQ +++AD+W++    ++ +        + +   R+ +  E L+K+  R++  ++ + + 
Sbjct: 543 HQHQQEADDWKQELARLQQLHRQELERCQLDFRDRTLKLEEELHKQRDRALAVLTEKDLE 602

Query: 113 MEVIDNVIRTAG------------------TAPSGAHTEPWTFVVVKDPDVKHKIRKIIE 154
           +E + +V   +G                  T+ S + T+        +P       ++  
Sbjct: 603 LEQLRSVALASGLPGRRSPVGGGGPGDPADTSSSDSLTQALQLAAANEPTFFLYAEQLAR 662

Query: 155 EEEEINYMKRMGHRWVTDLKKLRTNWIKE 183
           +E EI  +++  HR   ++ +L+   ++E
Sbjct: 663 KEVEITSLRKQKHRLEVEVHQLQDRLLEE 691


>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
            [Homo sapiens]
          Length = 2073

 Score = 32.0 bits (71), Expect = 0.65
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)

Query: 27   MEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEEDADEWQESEENVEHIPFSHNHYPEKEM 86
            +E  K       E     +E+ ++  +  + EE+ +E +E EEN++  P      P+   
Sbjct: 1062 LELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSP-PRLTKPQSVA 1120

Query: 87   VKRSQEFYELLNKRRSVRFISNEQVPMEVI 116
            +KR + F  L  KR   R   N  V  E I
Sbjct: 1121 IKRKRPFV-LKKKRGRKRRRINSSVTTETI 1149


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 42  PWVDEDLK----DSSDLHQAEEDADEWQESEENVEHIPFSHNHYPEKEMVKRSQE 92
           P ++EDL     +SSD  + EE+ +E +E EE  E   F      E+E  +  +E
Sbjct: 872 PALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEE 926


>gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
           sapiens]
          Length = 142

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 15/53 (28%), Positives = 27/53 (50%)

Query: 25  RSMEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEEDADEWQESEENVEHIPFS 77
           R  EK++ E R   + R     + ++  +  + EE+ +E +E EE  E + FS
Sbjct: 72  RREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFS 124


>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
            sapiens]
          Length = 5033

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 6    PILVAILCILVVWIFKNADRSMEKKKGEPRTRAEARPWVDEDLK-DSSDLHQAEEDADEW 64
            P+L  +  +LV+ IF + D     K  EP    E     DE+ + +  D  + EED +E 
Sbjct: 1840 PVLKLVSTLLVMGIFGDEDVKQILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEET 1899

Query: 65   QESEENVE 72
             + +E+ E
Sbjct: 1900 AQEKEDEE 1907


>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
            sapiens]
          Length = 5038

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 6    PILVAILCILVVWIFKNADRSMEKKKGEPRTRAEARPWVDEDLK-DSSDLHQAEEDADEW 64
            P+L  +  +LV+ IF + D     K  EP    E     DE+ + +  D  + EED +E 
Sbjct: 1840 PVLKLVSTLLVMGIFGDEDVKQILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEET 1899

Query: 65   QESEENVE 72
             + +E+ E
Sbjct: 1900 AQEKEDEE 1907


>gi|148746195 trichohyalin [Homo sapiens]
          Length = 1943

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 27  MEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEEDADEWQESEENVEHIPFSHNHYPEKEM 86
           +E+++   R    A+P + E L+    L Q EE  +E Q  E            Y E+E 
Sbjct: 878 LEEERKRRRHTLYAKPALQEQLRKEQQLLQEEE--EELQREEREKRRRQEQERQYREEEQ 935

Query: 87  VKRSQEFYELLNKRRSVR 104
           +++ +E  +LL + R  R
Sbjct: 936 LQQEEE--QLLREEREKR 951


>gi|57634514 SPANX-N2 protein [Homo sapiens]
          Length = 180

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/71 (26%), Positives = 32/71 (45%)

Query: 21  KNADRSMEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEEDADEWQESEENVEHIPFSHNH 80
           +N+   +++++ E    AE     DEDL  S    Q +ED D  + S +  E +  S   
Sbjct: 75  ENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEGSSQEDEDLDSSEGS 134

Query: 81  YPEKEMVKRSQ 91
             E E +  S+
Sbjct: 135 SQEDEDLDSSE 145


>gi|39995078 hypothetical protein LOC60684 isoform b [Homo sapiens]
          Length = 1086

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 163 KRMGHRWVTDLKKLRTNWIKEYLDTAPILILIFKQVHGFAANGKKK 208
           KR  + W      L+T W+ ++L+  P L+++F ++       K+K
Sbjct: 68  KRTSYEWYIPKGILKTGWMNKHLNLVPALVVVFYELDWDEPQWKEK 113


>gi|39995076 hypothetical protein LOC60684 isoform a [Homo sapiens]
          Length = 1133

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 163 KRMGHRWVTDLKKLRTNWIKEYLDTAPILILIFKQVHGFAANGKKK 208
           KR  + W      L+T W+ ++L+  P L+++F ++       K+K
Sbjct: 68  KRTSYEWYIPKGILKTGWMNKHLNLVPALVVVFYELDWDEPQWKEK 113


>gi|87298939 hypothetical protein LOC131831 [Homo sapiens]
          Length = 663

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 45 DEDLKDSSDLHQAEEDADEWQESEENVEHIPFSHNHYPEKEMVKRSQE 92
          +E+L++  +  + EE+ +E +E EE VE          E+E+V   QE
Sbjct: 22 EEELEEEEEEEEVEEEEEEVEEEEEEVEE---EEEEVVEEELVGEEQE 66


>gi|115527076 src kinase associated phosphoprotein 1 isoform 2 [Homo
           sapiens]
          Length = 358

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 38  AEARPWVDED---LKDSSDLHQAEEDADEWQESEENVEHI 74
           AEAR WVD+    LKD S L    E+ +E +E EE  + I
Sbjct: 196 AEARDWVDQISFLLKDLSSLTIPYEEDEEEEEKEETYDDI 235


>gi|115527074 src kinase associated phosphoprotein 1 isoform 1 [Homo
           sapiens]
          Length = 359

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 38  AEARPWVDED---LKDSSDLHQAEEDADEWQESEENVEHI 74
           AEAR WVD+    LKD S L    E+ +E +E EE  + I
Sbjct: 196 AEARDWVDQISFLLKDLSSLTIPYEEDEEEEEKEETYDDI 235


>gi|156104874 envoplakin [Homo sapiens]
          Length = 2033

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 24   DRSMEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEEDADEWQESEENVEHIPFS-----H 78
            +RS E  +   R +A+    V+   +    L + + + DEW+     VE    S     H
Sbjct: 1261 ERSPEVLREIDRLKAQLNELVNSHGRSQEQLIRLQGERDEWRRERAKVETKTVSKEVVRH 1320

Query: 79   NHYP--EKEMVKRSQEFYELLNKRRS 102
               P  EKE  +  QE  E   KRR+
Sbjct: 1321 EKDPVLEKEAERLRQEVREAAQKRRA 1346


>gi|41350212 bromodomain containing 7 [Homo sapiens]
          Length = 651

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 49  KDSSDLHQAEEDADEWQESEENVEHIPFSHNHYPEKEMVKRSQEFYELLNKRRSVRFISN 108
           KD +D  Q+ ED   WQ   E+           P KE  K+ ++  E  +K +S    +N
Sbjct: 257 KDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSKENKKKDKDMLE--DKFKS----NN 310

Query: 109 EQVPMEVIDNVIRTAG 124
            +   E +D +++ +G
Sbjct: 311 LEREQEQLDRIVKESG 326


>gi|50897284 peptidyl-tRNA hydrolase 1 homolog [Homo sapiens]
          Length = 214

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 242 NCGPRLRVLLGRPAHEKLLMLLPVG--YPSKEATVPDLKRKPLDQIM 286
           N  PRLRV +GRPAH + +    +G   P+++  +P L  +  D I+
Sbjct: 154 NAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQELLPLLLDRATDLIL 200


>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
            sapiens]
          Length = 1911

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 14/65 (21%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 58   EEDADEWQESEENVEHIPFSHNHYPEKEMVKRSQEFYELLNKRRSVR--FISNEQVPMEV 115
            EED++  Q +++ +E +    N   E+E  K+     +L  +   ++   + NE +P E+
Sbjct: 1043 EEDSENEQAAKQELEELAIQANVKVEEENTKKQLPEVQLTEEEEVIKSSLMENEPLPPEI 1102

Query: 116  IDNVI 120
            ++ ++
Sbjct: 1103 LEVIL 1107


>gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]
          Length = 694

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 10/83 (12%)

Query: 36  TRAEAR---PWVDEDLKDSSDLHQAEEDAD------EWQ-ESEENVEHIPFSHNHYPEKE 85
           TR +AR     ++  L D +D+H  E +A+      +WQ ES+E V  +  SH    +  
Sbjct: 34  TRTQARFLQLCLEHSLADCNDIHLLESEANSAAIVSQWQQESKEKVVSLLLSHLPLLQPG 93

Query: 86  MVKRSQEFYELLNKRRSVRFISN 108
             +   E+  LL K  +    SN
Sbjct: 94  NTEAKSEYMRLLQKVLAYSIESN 116


>gi|70608155 phosphodiesterase 3A [Homo sapiens]
          Length = 1141

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 20/118 (16%)

Query: 43   WVDEDLKDSSDLHQAEEDADEWQ--ESEENVEHIPFSHNHYPEKEMVKRSQEFYELLNKR 100
            WV ED  +S D    EE+ +E      EE  E+     N  P+K+  KR + + ++    
Sbjct: 1026 WV-EDSDESGDTDDPEEEEEEAPAPNEEETCEN-----NESPKKKTFKRRKIYCQI---- 1075

Query: 101  RSVRFISNEQVPMEVIDNVIRTAGTAPSGAHTEPWTFVVVKDPDVKHKIRKIIEEEEE 158
             +   + N ++  +VI+   R AG         P             +I+ I EEEEE
Sbjct: 1076 -TQHLLQNHKMWKKVIEEEQRLAGIENQSLDQTP-------QSHSSEQIQAIKEEEEE 1125


>gi|148612805 pigeon homolog [Homo sapiens]
          Length = 854

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 12/63 (19%)

Query: 64  WQESEENVEHIPFSHNHYPEKEMVKRSQEFYELLN-----KRRSVRFISNEQVPMEVIDN 118
           W++   N+E++ ++  H+     V R +E++ L++     KRRS  ++ N      ++DN
Sbjct: 523 WEKLNSNLEYVKYAKPHFHYNNSVVR-REWHNLISEEKTGKRRSAAYVRN------ILDN 575

Query: 119 VIR 121
            ++
Sbjct: 576 AVK 578


>gi|196259796 hypothetical protein LOC375484 [Homo sapiens]
          Length = 457

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 48  LKDSSDLHQAEEDADEWQESEENVEHIPFSHNHY 81
           L +S+ L + + D  +WQ  +E VEH+ F  + Y
Sbjct: 332 LNNSTSLLKCQSDKSQWQTWDELVEHLQFLLSSY 365


>gi|148368962 NKF3 kinase family member [Homo sapiens]
          Length = 1746

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 42   PWVDEDLKDSSDLHQAEEDADEWQESEENVEHIPFSHNHYPEKEMVKRSQEFYELLNKR- 100
            PW D D          E+D D+ +E+EE+ +      N  P  E     +E   +++K+ 
Sbjct: 1404 PWEDPD--------DPEKDEDDMEETEEDAKGETDGKNPKPCSEAASSQKENQGVMSKKQ 1455

Query: 101  RSVRFISNEQVPMEVIDNVIR 121
            RS   +   +VP   + + +R
Sbjct: 1456 RSHVVVITREVPCLTVADFVR 1476


>gi|155030185 hypothetical protein LOC55726 [Homo sapiens]
          Length = 706

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 10/117 (8%)

Query: 23  ADRSMEKKKGEPRTRAEARPWVDEDLKDSSDLHQAE-EDADEWQESEENVEHIPFSHNHY 81
           A RS   ++ E + R   R    ED +D S+    + E    WQ+SE     +       
Sbjct: 559 ACRSKPPEEEERKKRGRKR----EDKEDKSEKAVKDYEQEKSWQDSERLKGILERGKEEL 614

Query: 82  PEKEMVKRSQEFYELLNKRRSVRFISNEQV-----PMEVIDNVIRTAGTAPSGAHTE 133
            E E++K S +  E  NK+  V      QV     P+ ++        TA S  H E
Sbjct: 615 AEAEIIKDSPDSPEPPNKKPLVEMDETPQVEKSKGPVSLLSLWSNRINTANSRKHQE 671


>gi|5174593 melatonin receptor 1A [Homo sapiens]
          Length = 350

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 2   YFLTPILVAILCILVVWIFKNADRSMEKKKGEPRTRAE 39
           +FL P+++ I C L +WI     R   K   +P+ + +
Sbjct: 195 HFLVPMIIVIFCYLRIWILVLQVRQRVKPDRKPKLKPQ 232


>gi|42740903 MTERF domain containing 2 [Homo sapiens]
          Length = 381

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 28  EKKKGEPRTRAEARPWVDEDLKDSSDLHQAEEDADEWQESEENVE 72
           E+++ E  T  + R  +DED  D  +    E+D DE  + E++ E
Sbjct: 323 EEEESESSTSDDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDDDE 367


>gi|122056619 LIM domain binding 3 isoform 4 [Homo sapiens]
          Length = 283

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 11/60 (18%)

Query: 55  HQAEEDADEWQESEENVEHIPF---------SHNHYPEKEMVKRSQEFYELLNKRRSVRF 105
           ++ E++ADEW     N++   F              P++E ++RS+E +E   +R S RF
Sbjct: 207 NKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEEALRRSRERFE--TERNSPRF 264


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,350,338
Number of Sequences: 37866
Number of extensions: 520260
Number of successful extensions: 2112
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2052
Number of HSP's gapped (non-prelim): 78
length of query: 289
length of database: 18,247,518
effective HSP length: 101
effective length of query: 188
effective length of database: 14,423,052
effective search space: 2711533776
effective search space used: 2711533776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.