Guide to the Human Genome
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Name: BRD7 Sequence: fasta or formatted (651aa) NCBI GI: 41350212
Description:

bromodomain containing 7

Referenced in:

Bromodomain Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         26           2
 C cysteine            1.2          8           1
 D aspartate           7.7         50           2
 E glutamate           9.7         63           2
 F phenylalanine       2.9         19           2
 G glycine             6.0         39           2
 H histidine           2.5         16           1
 I isoleucine          3.5         23           2
 K lysine             10.3         67           3
 L leucine             8.9         58           2
 M methionine          2.9         19           1
 N asparagine          3.7         24           2
 P proline             5.5         36           3
 Q glutamine           4.6         30           2
 R arginine            5.5         36           3
 S serine              7.2         47           2
 T threonine           6.0         39           3
 V valine              4.8         31           1
 W tryptophan          0.2          1           1
 Y tyrosine            2.9         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bromodomain containing 7 
BRD9                  0.252   bromodomain containing 9 isoform 1 
BRD9                  0.149   bromodomain containing 9 isoform 2 
BRD1                  0.051   bromodomain containing protein 1 
BRPF3                 0.051   bromodomain and PHD finger containing, 3 
BRPF1                 0.048   bromodomain and PHD finger-containing protein 1 isof...
BRPF1                 0.044   bromodomain and PHD finger-containing protein 1 isof...
SMARCA2               0.034   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.033   SWI/SNF-related matrix-associated actin-dependent re...
CREBBP                0.031   CREB binding protein isoform b 
CREBBP                0.031   CREB binding protein isoform a 
BRD8                  0.031   bromodomain containing 8 isoform 3 
BRD2                  0.030   bromodomain containing 2 
BRD2                  0.030   bromodomain containing 2 
BRD8                  0.029   bromodomain containing 8 isoform 2 
BRD8                  0.029   bromodomain containing 8 isoform 1 
SMARCA4               0.029   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.029   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.028   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.028   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.028   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.028   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.028   SWI/SNF-related matrix-associated actin-dependent re...
KAT2B                 0.026   K(lysine) acetyltransferase 2B 
EP300                 0.026   E1A binding protein p300 
PBRM1                 0.026   polybromo 1 isoform 1 
PBRM1                 0.026   polybromo 1 isoform 2 
PBRM1                 0.026   polybromo 1 isoform 4 
TAF1                  0.026   TBP-associated factor 1 isoform 2 
TAF1                  0.026   TBP-associated factor 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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