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Search of human proteins with 42734325
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|42734325 wings apart-like homolog [Homo sapiens]
(1190 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42734325 wings apart-like homolog [Homo sapiens] 2390 0.0
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 60 2e-08
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 42 0.003
gi|156104891 general transcription factor IIF, polypeptide 1, 74... 40 0.013
gi|89886480 zinedin isoform 2 [Homo sapiens] 39 0.029
gi|89886477 zinedin isoform 1 [Homo sapiens] 39 0.029
gi|122937227 U2-associated SR140 protein [Homo sapiens] 39 0.029
gi|62750354 matrin 3 [Homo sapiens] 37 0.11
gi|21626466 matrin 3 [Homo sapiens] 37 0.11
gi|33620745 pre-mRNA cleavage complex II protein Pcf11 [Homo sap... 37 0.11
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 37 0.15
gi|122937261 coiled-coil domain containing 85A [Homo sapiens] 37 0.15
gi|119943093 glycogenin 2 isoform a [Homo sapiens] 36 0.19
gi|119964690 glycogenin 2 isoform b [Homo sapiens] 36 0.19
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 36 0.25
gi|31317305 M-phase phosphoprotein 10 [Homo sapiens] 36 0.25
gi|38016937 lemur tyrosine kinase 2 [Homo sapiens] 36 0.25
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 36 0.25
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 36 0.25
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 35 0.33
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 35 0.42
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 35 0.42
gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens] 35 0.42
gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens] 35 0.42
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 35 0.42
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 35 0.42
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 35 0.42
gi|117414154 sodium channel associated protein 2 isoform b [Homo... 35 0.42
gi|117414162 sodium channel associated protein 2 isoform a [Homo... 35 0.42
gi|55770834 centromere protein F [Homo sapiens] 35 0.42
>gi|42734325 wings apart-like homolog [Homo sapiens]
Length = 1190
Score = 2390 bits (6195), Expect = 0.0
Identities = 1190/1190 (100%), Positives = 1190/1190 (100%)
Query: 1 MTSRFGKTYSRKGGNGSSKFDEVFSNKRTTLSTKWGETTFMAKLGQKRPNFKPDIQEIPK 60
MTSRFGKTYSRKGGNGSSKFDEVFSNKRTTLSTKWGETTFMAKLGQKRPNFKPDIQEIPK
Sbjct: 1 MTSRFGKTYSRKGGNGSSKFDEVFSNKRTTLSTKWGETTFMAKLGQKRPNFKPDIQEIPK 60
Query: 61 KPKVEEESTGDPFGFDSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKIS 120
KPKVEEESTGDPFGFDSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKIS
Sbjct: 61 KPKVEEESTGDPFGFDSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKIS 120
Query: 121 HVVVEDTVVSDKCFPLEDTLLGKEKSTNRIVEDDASISSCNKLITSDKVENFHEEHEKNS 180
HVVVEDTVVSDKCFPLEDTLLGKEKSTNRIVEDDASISSCNKLITSDKVENFHEEHEKNS
Sbjct: 121 HVVVEDTVVSDKCFPLEDTLLGKEKSTNRIVEDDASISSCNKLITSDKVENFHEEHEKNS 180
Query: 181 HHIHKNADDSTKKPNAETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWD 240
HHIHKNADDSTKKPNAETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWD
Sbjct: 181 HHIHKNADDSTKKPNAETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWD 240
Query: 241 NDFEDIRSEDCILSLDSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNCRTYCRAN 300
NDFEDIRSEDCILSLDSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNCRTYCRAN
Sbjct: 241 NDFEDIRSEDCILSLDSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNCRTYCRAN 300
Query: 301 KTKSSQGASNFDKLMDGTSQALAKANSESSKDGLNQAKKGGVSCGTSFRGTVGRTRDYTV 360
KTKSSQGASNFDKLMDGTSQALAKANSESSKDGLNQAKKGGVSCGTSFRGTVGRTRDYTV
Sbjct: 301 KTKSSQGASNFDKLMDGTSQALAKANSESSKDGLNQAKKGGVSCGTSFRGTVGRTRDYTV 360
Query: 361 LHPSCLSVCNVTIQDTMERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKS 420
LHPSCLSVCNVTIQDTMERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKS
Sbjct: 361 LHPSCLSVCNVTIQDTMERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKS 420
Query: 421 KKDVKLEFFGFEDHETGGDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVERKTSKKRT 480
KKDVKLEFFGFEDHETGGDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVERKTSKKRT
Sbjct: 421 KKDVKLEFFGFEDHETGGDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVERKTSKKRT 480
Query: 481 KTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQGDKSKENTR 540
KTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQGDKSKENTR
Sbjct: 481 KTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQGDKSKENTR 540
Query: 541 KIFSGPKRSPTKAVYNARHWNHPDSEELPGPPVVKPQSVTVRLSSKEPNQKDDGVFKAPA 600
KIFSGPKRSPTKAVYNARHWNHPDSEELPGPPVVKPQSVTVRLSSKEPNQKDDGVFKAPA
Sbjct: 541 KIFSGPKRSPTKAVYNARHWNHPDSEELPGPPVVKPQSVTVRLSSKEPNQKDDGVFKAPA 600
Query: 601 PPSKVIKTVTIPTQPYQDIVTALKCRREDKELYTVVQHVKHFNDVVEFGENQEFTDDIEY 660
PPSKVIKTVTIPTQPYQDIVTALKCRREDKELYTVVQHVKHFNDVVEFGENQEFTDDIEY
Sbjct: 601 PPSKVIKTVTIPTQPYQDIVTALKCRREDKELYTVVQHVKHFNDVVEFGENQEFTDDIEY 660
Query: 661 LLSGLKSTQPLNTRCLSVISLATKCAMPSFRMHLRAHGMVAMVFKTLDDSQHHQNLSLCT 720
LLSGLKSTQPLNTRCLSVISLATKCAMPSFRMHLRAHGMVAMVFKTLDDSQHHQNLSLCT
Sbjct: 661 LLSGLKSTQPLNTRCLSVISLATKCAMPSFRMHLRAHGMVAMVFKTLDDSQHHQNLSLCT 720
Query: 721 AALMYILSRDRLNMDLDRASLDLMIRLLELEQDASSAKLLNEKDMNKIKEKIRRLCETVH 780
AALMYILSRDRLNMDLDRASLDLMIRLLELEQDASSAKLLNEKDMNKIKEKIRRLCETVH
Sbjct: 721 AALMYILSRDRLNMDLDRASLDLMIRLLELEQDASSAKLLNEKDMNKIKEKIRRLCETVH 780
Query: 781 NKHLDLENITTGHLAMETLLSLTSKRAGDWFKEELRLLGGLDHIVDKVKECVDHLSRDED 840
NKHLDLENITTGHLAMETLLSLTSKRAGDWFKEELRLLGGLDHIVDKVKECVDHLSRDED
Sbjct: 781 NKHLDLENITTGHLAMETLLSLTSKRAGDWFKEELRLLGGLDHIVDKVKECVDHLSRDED 840
Query: 841 EEKLVASLWGAERCLRVLESVTVHNPENQSYLIAYKDSQLIVSSAKALQHCEELIQQYNR 900
EEKLVASLWGAERCLRVLESVTVHNPENQSYLIAYKDSQLIVSSAKALQHCEELIQQYNR
Sbjct: 841 EEKLVASLWGAERCLRVLESVTVHNPENQSYLIAYKDSQLIVSSAKALQHCEELIQQYNR 900
Query: 901 AEDSICLADSKPLPHQNVTNHVGKAVEDCMRAIIGVLLNLTNDNEWGSTKTGEQDGLIGT 960
AEDSICLADSKPLPHQNVTNHVGKAVEDCMRAIIGVLLNLTNDNEWGSTKTGEQDGLIGT
Sbjct: 901 AEDSICLADSKPLPHQNVTNHVGKAVEDCMRAIIGVLLNLTNDNEWGSTKTGEQDGLIGT 960
Query: 961 ALNCVLQVPKYLPQEQRFDIRVLGLGLLINLVEYSARNRHCLVNMETSCSFDSSICSGEG 1020
ALNCVLQVPKYLPQEQRFDIRVLGLGLLINLVEYSARNRHCLVNMETSCSFDSSICSGEG
Sbjct: 961 ALNCVLQVPKYLPQEQRFDIRVLGLGLLINLVEYSARNRHCLVNMETSCSFDSSICSGEG 1020
Query: 1021 DDSLRIGGQVHAVQALVQLFLERERAAQLAESKTDELIKDAPTTQHDKSGEWQETSGEIQ 1080
DDSLRIGGQVHAVQALVQLFLERERAAQLAESKTDELIKDAPTTQHDKSGEWQETSGEIQ
Sbjct: 1021 DDSLRIGGQVHAVQALVQLFLERERAAQLAESKTDELIKDAPTTQHDKSGEWQETSGEIQ 1080
Query: 1081 WVSTEKTDGTEEKHKKEEEDEELDLNKALQHAGKHMEDCIVASYTALLLGCLCQESPINV 1140
WVSTEKTDGTEEKHKKEEEDEELDLNKALQHAGKHMEDCIVASYTALLLGCLCQESPINV
Sbjct: 1081 WVSTEKTDGTEEKHKKEEEDEELDLNKALQHAGKHMEDCIVASYTALLLGCLCQESPINV 1140
Query: 1141 TTVREYLPEGDFSIMTEMLKKFLSFMNLTCAVGTTGQKSISRVIEYLEHC 1190
TTVREYLPEGDFSIMTEMLKKFLSFMNLTCAVGTTGQKSISRVIEYLEHC
Sbjct: 1141 TTVREYLPEGDFSIMTEMLKKFLSFMNLTCAVGTTGQKSISRVIEYLEHC 1190
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 59.7 bits (143), Expect = 2e-08
Identities = 83/464 (17%), Positives = 169/464 (36%), Gaps = 13/464 (2%)
Query: 76 DSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKISHVVVEDTVVSDKCFP 135
DS D S S N + S S+SS +++ + + +++S S D+ S+
Sbjct: 673 DSSDSSSSSDSSNSSD--SSDSSDSSNSSESSDSSDSSDSDSSDS----SDSSNSNSSDS 726
Query: 136 LEDTLLGKEKSTNRIVEDDASISSCNKLITSDKVENFHEEHEKNSHHIHKNADDSTKKPN 195
S+N D+S SS + SD ++ + +S ++D S +
Sbjct: 727 DSSNSSDSSDSSNSSDSSDSSDSSNS----SDSSDSSDSSNSSDSSDSSDSSDSSDSSNS 782
Query: 196 AETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWDNDFEDIRSEDCILSL 255
+++ +S +++D+ NS S+ S S + + N + S + S
Sbjct: 783 SDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSS 842
Query: 256 DSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNCRTYCRANKTKSSQGASNFDKLM 315
DS + D D NR ++ N + D S ++ +N++ +S +S+
Sbjct: 843 DSSDSSDGSDSDSSNRSDSSNSSDSSDSSDS-SNSSDSSDSSDSNESSNSSDSSDSSNSS 901
Query: 316 DGTSQALAKANSESSKDGLNQAKKGGVSCGTSFRGTVGRTRDYTVLHPSCLSVCNVTIQD 375
D S + ++ S + + + S S + D + S S + D
Sbjct: 902 DSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSD 961
Query: 376 TMERS-MDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKSKKDVKLEFFGFEDH 434
+ S + +S +D + +D + S ++ S+ S + D
Sbjct: 962 SSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDS 1021
Query: 435 ETGGDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVERKTSKKRTKTAPSPSLQPPPES 494
D S S+ D S+S D D + S + ++ S +S
Sbjct: 1022 SNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDS 1081
Query: 495 NDNSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQGDKSKEN 538
+++S DS +N++++ D ++ S + D S +
Sbjct: 1082 SESS-DSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSS 1124
Score = 57.0 bits (136), Expect = 1e-07
Identities = 110/531 (20%), Positives = 196/531 (36%), Gaps = 56/531 (10%)
Query: 10 SRKGGNGSSKFDEVFSNKRTTLSTKWGETTFMAKLGQKRPNFKPDIQEIPKKPKVEEEST 69
S+ GNGS + +T T ++ G N K D + K + +S+
Sbjct: 498 SKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGND-DNDKSDSGK-GKSDSSDSDSS 555
Query: 70 GDPFGFDSDDESLPVSS-KNLAQVKCSSYSESSEAAQLEEVTSVLEANSKISHVVVEDTV 128
DS D S SS N + SS S+SS+++ + S ++S S + +
Sbjct: 556 DSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSD 615
Query: 129 VSDKCFPLEDTLLGKEKSTNRIVEDDASISSCNKLITSDKVENFHEEHEKNSHHIHKNAD 188
SD D+ + S++ + D+S S N +SD ++ + NS ++D
Sbjct: 616 SSDSSDSKSDSSKSESDSSDSDSKSDSSDS--NSSDSSDNSDSSDSSNSSNSSDSSDSSD 673
Query: 189 DSTKKPNAETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWDNDFEDIRS 248
S +++++ +S+ +++D+ NS SE S +D D S
Sbjct: 674 SSDSSSSSDSSNSSDSSDSSDSSNS---------SESSD------------SSDSSDSDS 712
Query: 249 EDCILSLDSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNCRTYCRANKTKSSQGA 308
D S +S+ D D N ++ + + D S + + ++ + SS +
Sbjct: 713 SDSSDSSNSN----SSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSS 768
Query: 309 SNFDKLMDGTSQALAKANSESSKDGLNQAKKGGVSCGTSFRGTVGRTRDYTVLHPSCLSV 368
+ D +S + +NS S D N + S +S + D + S S
Sbjct: 769 DSSD-----SSDSSDSSNSSDSNDSSNSSDSSD-SSNSSDSSNSSDSSDSSDSSDSDSS- 821
Query: 369 CNVTIQDTMERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKSKKDVKLEF 428
N + S D +S +D ++ +D + S ++ R SN+ D
Sbjct: 822 -NSSDSSNSSDSSDSSNSSDSSDSSDS------SDGSDSDSSNRSDSSNSSDSSD----- 869
Query: 429 FGFEDHETGGDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVERKTSKKRTKTAPSPSL 488
D D S SN D S S D + D +S + S S
Sbjct: 870 --SSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSES- 926
Query: 489 QPPPESNDNSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQGDKSKENT 539
S+DNS S S +N++++ D ++ S + D S N+
Sbjct: 927 ---SNSSDNSNSSDS-SNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNS 973
Score = 53.5 bits (127), Expect = 1e-06
Identities = 78/473 (16%), Positives = 173/473 (36%), Gaps = 14/473 (2%)
Query: 65 EEESTGDPFGFDSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKISHVVV 124
E + D DS D S S+ N + S+ S+SS+++ + + ++++
Sbjct: 700 ESSDSSDSSDSDSSDSS-DSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDS 758
Query: 125 EDTVVSDKCFPLEDTLLGKEKSTNRIVEDDASISSCNKLITSDKVENFHEEHEKNSHHIH 184
D+ S D+ + S + D ++ S + S N + + +
Sbjct: 759 SDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDS 818
Query: 185 KNADDSTKKPNAETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWDNDFE 244
+++ S +++++ +S +++D+ +S G +S + S + + N +
Sbjct: 819 DSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSD 878
Query: 245 DIRSEDCILSLDSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNCRTYCRANKTKS 304
S D S +S + + + ++ N + D S + + +N + S
Sbjct: 879 SSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDS 938
Query: 305 SQGASNFDKLMDGTSQALAKANSESSKDGLNQAKKGGVSCGTSFRGTVGRTRDYTVLHPS 364
S + + D D ++ + + +S+SS + S +S + D + S
Sbjct: 939 SNSSDSSDS-SDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDS 997
Query: 365 CLSVCNVTIQDTMERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKSKKDV 424
S + D+ + S D +S ++ ++ +D + S ++ S+ S
Sbjct: 998 SDSSNSSDSSDSSDSS-DSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSN 1056
Query: 425 KLEFFGFEDHETGGDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVERKTSKKRTKTAP 484
+ D D S S+ D SES D D + S + ++
Sbjct: 1057 SSDSSDSSDSSDSSDSSDSSDSS---------DSSESSDSSDSSNSSDSSDSSDSSDSSD 1107
Query: 485 SPSLQPPPESND--NSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQGDKS 535
S +S+D NS DS ++++++ D + S + D S
Sbjct: 1108 SSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSS 1160
Score = 49.3 bits (116), Expect = 2e-05
Identities = 83/468 (17%), Positives = 171/468 (36%), Gaps = 33/468 (7%)
Query: 76 DSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKISHVVVEDTVVSDKCFP 135
DS D S S N + SS S S+++ + ++ +++ + D+ SD
Sbjct: 793 DSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDS--SDSSDG 850
Query: 136 LEDTLLGKEKSTNRIVEDDASISSCNKLITSDKVENFHEEHEKNSHHIHKNADDSTKKPN 195
+ + S+N D+S SS + SD ++ NS ++ DS+ +
Sbjct: 851 SDSDSSNRSDSSNSSDSSDSSDSSNS----SDSSDSSDSNESSNS----SDSSDSSNSSD 902
Query: 196 AETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWDNDFEDIRSEDCILSL 255
++++ +S +++D+ NS + S+ S S + + + + S D S
Sbjct: 903 SDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSS--DSSDSSDSSNSSDSSNSS 960
Query: 256 DSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNCRTYCRANKTKSSQGASNFDKLM 315
DS + D + + ++ N + D S + + S +SN
Sbjct: 961 DSSNSSDSSDSNSSDSSDSSNSSDSSDSSDS-------------SDSSDSSDSSNSSDSS 1007
Query: 316 DGTSQALAKANSESSKDGLNQAKKGGVSCGTSFRGTVGRTRDYTVLHPSCLSVCNVTIQD 375
D + + + +S+SS + + S +S + D + S S + D
Sbjct: 1008 DSSDSSDSSNSSDSSNS--SDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSD 1065
Query: 376 TMERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKSKKDVKLEFFGFEDHE 435
+ + S D +S +D E+ ++ + S ++ S+ S + +
Sbjct: 1066 SSDSS-DSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSS 1124
Query: 436 TGGDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESN 495
D S S+ D SES D D + S + ++ S +S+
Sbjct: 1125 DSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSS 1184
Query: 496 D-----NSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQGDKSKEN 538
D +S DS ++++++ D ++ S + D S N
Sbjct: 1185 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSN 1232
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 42.0 bits (97), Expect = 0.003
Identities = 50/228 (21%), Positives = 82/228 (35%), Gaps = 39/228 (17%)
Query: 400 KKADIATSKTTTRFRPSNTKSKKDVK----------------------LEFFGFEDHETG 437
KK + KT T F + KKD+K L G D E+
Sbjct: 200 KKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSLNVDFLMLVGQSDDESI 259
Query: 438 GDEGG------SGSSNYKIKYFGFD------DLSESEDDEDDDCQVERKTSKKRTKTAPS 485
+ + S NY +KY + + +S D E +D + +K SKK K
Sbjct: 260 NFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKK 319
Query: 486 PSLQPPPESNDNSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQGDKSKENTRKIFSG 545
+ + + S D++SG + E D +D + +KK K+ K + SG
Sbjct: 320 DDKKKDVKKDTESTDAESGDSKDERKDTKKD----KKKLKKDDKKKDTKKYPESTDTESG 375
Query: 546 PKRSPTKAVYNARHWNHPDSEELPGPPVVKPQSVTVRLSSKEPNQKDD 593
+ N + + D ++ + L SKE +QKD+
Sbjct: 376 DAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKE-SQKDE 422
Score = 39.3 bits (90), Expect = 0.023
Identities = 80/404 (19%), Positives = 144/404 (35%), Gaps = 39/404 (9%)
Query: 161 NKLITSDKVENFHEEHEKNSHHIHKNADDSTKKPNAETTVASEIKETNDTWNSQFGKRPE 220
+K I +K + +E + H+N K ++ET S+ +T SQ K+
Sbjct: 144 SKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNCSQKDKKDS 203
Query: 221 SPS-----EISPIKGSVRTGL--FEWDND-FEDIRSEDCILSLDSDPLLEMKDDD---FK 269
S E K + + L + ND +I SE+ L++D L+ DD+ F
Sbjct: 204 KNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENS-LNVDFLMLVGQSDDESINFD 262
Query: 270 NRLENLNEAIEEDIVQSVLRPTNCRTYCRANKTKSSQGASNFDKLMDGTSQALAKANSES 329
L N ++ ++ + T T A K+ ++ + D D +
Sbjct: 263 AWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDK 322
Query: 330 SKDGLNQAKKGGVSCGTSFRGTVGRTRDYTVLHPSCLSVCNVTIQDTMERSMDEFTASTP 389
KD + G S +D L +D ++ ++ ST
Sbjct: 323 KKDVKKDTESTDAESGDSKDERKDTKKDKKKLK-----------KDDKKKDTKKYPESTD 371
Query: 390 ADLGEAGRLRKKADIATSKTTTRFRPSNTKSKKDVKLEFFGFEDHETGGDEGGSGSSNYK 449
+ G+A R S+ + ++ K K K+ F + E E K
Sbjct: 372 TESGDAKDARN-----DSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDK 426
Query: 450 IKYFGFDDLSESEDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAE 509
+ S D+E D E K K+ K + + +D +D++ NAE
Sbjct: 427 KDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKG-KKDSKKDDKKKDAK---KNAE 482
Query: 510 NLDFTEDLPGVPESVKKPINKQGDKSKENTRKIFSGPKRSPTKA 553
+ + DL +KK +K+ K K+ ++K R T++
Sbjct: 483 STEMESDL-----ELKK--DKKHSKEKKGSKKDIKKDARKDTES 519
>gi|156104891 general transcription factor IIF, polypeptide 1, 74kDa
[Homo sapiens]
Length = 517
Score = 40.0 bits (92), Expect = 0.013
Identities = 56/250 (22%), Positives = 95/250 (38%), Gaps = 46/250 (18%)
Query: 373 IQDTMERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKSKKDVKLEFFGFE 432
++D +E S D AS G + +KKA +A K KK + FE
Sbjct: 210 LEDDLEMSSDASDASGEEG-GRVPKAKKKAPLAKG---------GRKKKKKKGSDDEAFE 259
Query: 433 DHETGGDEG--------GSGSSNYKIKYF-----------GFDDLSESEDDEDDDCQVER 473
D + G EG GS SS + + G D+ S+S ++ +++ E
Sbjct: 260 DSDDGDFEGQEVDYMSDGSSSSQEEPESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPEE 319
Query: 474 KTSKKRTKTAPSPSLQPPPESNDNSQDSQSG-----TNNAENLDFTEDLPGVPESVKKPI 528
++ K AP+P Q D+S++S S + A + F P+ +KP
Sbjct: 320 DKEEEEEKKAPTP--QEKKRRKDSSEESDSSEESDIDSEASSALFMAKKKTPPKRERKP- 376
Query: 529 NKQGDKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSEELPGPPVVK-------PQSVTV 581
G S+ N+R + T + A + + P K PQS++
Sbjct: 377 --SGGSSRGNSRPGTPSAEGGSTSSTLRAAASKLEQGKRVSEMPAAKRLRLDTGPQSLSG 434
Query: 582 RLSSKEPNQK 591
+ + + P+ K
Sbjct: 435 KSTPQPPSGK 444
>gi|89886480 zinedin isoform 2 [Homo sapiens]
Length = 760
Score = 38.9 bits (89), Expect = 0.029
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 462 EDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDLPGVP 521
++D D+D +++ KK+ PS +L P E D DS+ N + L ED G P
Sbjct: 273 DEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGEGAP 332
Query: 522 E 522
+
Sbjct: 333 D 333
>gi|89886477 zinedin isoform 1 [Homo sapiens]
Length = 753
Score = 38.9 bits (89), Expect = 0.029
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 462 EDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDLPGVP 521
++D D+D +++ KK+ PS +L P E D DS+ N + L ED G P
Sbjct: 273 DEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGEGAP 332
Query: 522 E 522
+
Sbjct: 333 D 333
>gi|122937227 U2-associated SR140 protein [Homo sapiens]
Length = 1029
Score = 38.9 bits (89), Expect = 0.029
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 459 SESEDD-EDDDCQVERKTSKKRTKTAPSPS--------LQPPPESNDNSQDSQSGTNNAE 509
S S+D E D+C RK K+R T+PSPS P P+S + + +S ++
Sbjct: 907 SRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESSR 966
Query: 510 NLDFTEDLPGVPESVKKPINKQGDKSKENTRKIFS-GPKRSPTKAVYNAR--HWNHPDSE 566
+ +D P S K + G ++ + +R+ S PK+S K+ +R H +H S+
Sbjct: 967 SRSSHKDSPR-DVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSK 1025
Query: 567 E 567
+
Sbjct: 1026 K 1026
>gi|62750354 matrin 3 [Homo sapiens]
Length = 847
Score = 37.0 bits (84), Expect = 0.11
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 63 KVEEESTGDPFGFDSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKISHV 122
K +EE +G+ D+ D+ L + SE EE ++LE+ S +
Sbjct: 625 KEQEEKSGEDGEKDTKDDQTEQEPNMLLE------SEDELLVDEEEAAALLESGSSVG-- 676
Query: 123 VVEDTVVSDKCFPLEDTLLGKEKSTNRIVEDDASISSC--NKLITSDKVENFHEEHEKNS 180
++T +++ D GK++ +++ V+ D S S+ KL DK+E +E+E
Sbjct: 677 --DETDLANLGDVASD---GKKEPSDKAVKKDGSASAAAKKKLKKVDKIEELDQENEAAL 731
Query: 181 HHIHKNADDSTKKPNAETTVASEIKETNDTWNSQFGKRPES---PSE--ISPIKGSVRTG 235
+ KN +++ + K+T++ + Q + + P E I P + +V G
Sbjct: 732 ENGIKNEENTEPGAESSENADDPNKDTSENADGQSDENKDDYTIPDEYRIGPYQPNVPVG 791
Query: 236 L 236
+
Sbjct: 792 I 792
>gi|21626466 matrin 3 [Homo sapiens]
Length = 847
Score = 37.0 bits (84), Expect = 0.11
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 63 KVEEESTGDPFGFDSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKISHV 122
K +EE +G+ D+ D+ L + SE EE ++LE+ S +
Sbjct: 625 KEQEEKSGEDGEKDTKDDQTEQEPNMLLE------SEDELLVDEEEAAALLESGSSVG-- 676
Query: 123 VVEDTVVSDKCFPLEDTLLGKEKSTNRIVEDDASISSC--NKLITSDKVENFHEEHEKNS 180
++T +++ D GK++ +++ V+ D S S+ KL DK+E +E+E
Sbjct: 677 --DETDLANLGDVASD---GKKEPSDKAVKKDGSASAAAKKKLKKVDKIEELDQENEAAL 731
Query: 181 HHIHKNADDSTKKPNAETTVASEIKETNDTWNSQFGKRPES---PSE--ISPIKGSVRTG 235
+ KN +++ + K+T++ + Q + + P E I P + +V G
Sbjct: 732 ENGIKNEENTEPGAESSENADDPNKDTSENADGQSDENKDDYTIPDEYRIGPYQPNVPVG 791
Query: 236 L 236
+
Sbjct: 792 I 792
>gi|33620745 pre-mRNA cleavage complex II protein Pcf11 [Homo
sapiens]
Length = 1555
Score = 37.0 bits (84), Expect = 0.11
Identities = 48/217 (22%), Positives = 83/217 (38%), Gaps = 20/217 (9%)
Query: 458 LSESEDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDL 517
L + D +DDD + +RKT++K+ K E +S+ +G+ N +
Sbjct: 408 LQDKTDGKDDDVKEKRKTAEKKDK----------DEHMKSSEHRLAGSRNKIINGIVQKQ 457
Query: 518 PGVPESVKKPINKQGDKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSEELPGPPVVKPQ 577
+ E +K K G S + S RSP R P + P P+
Sbjct: 458 DTITEESEKQGTKPGRSSTRKRSRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPK 517
Query: 578 SVTVRLSSKEPNQKDDGVFKAPAPPSKVIKTVTIPTQPYQDI--VTALKCRREDKELYTV 635
+ +R S + + ++ PPS+ + T+ QDI +K E++ T
Sbjct: 518 AGKIRQSGAKQSHMEEF-----TPPSREDRNAKRSTK--QDIRDPRRMKKTEEERPQETT 570
Query: 636 VQH-VKHFNDVVEFGENQEFTDDIEYLLSGLKSTQPL 671
QH K + E EN + + + SG + + L
Sbjct: 571 NQHSTKSGTEPKENVENWQSSKSAKRWKSGWEENKSL 607
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 36.6 bits (83), Expect = 0.15
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 34/152 (22%)
Query: 459 SESEDDEDDDCQVERKTSKKRT---KTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTE 515
S SED D+ + ++K K + + P PS PPP+ + +Q + + ++ +E
Sbjct: 265 SSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSA-PPPKKSLGTQPPKKAVEKQQPVESSE 323
Query: 516 DLPGVPESVKKPINKQGDKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSEELPGPPVVK 575
D + + D S E K+ PTKAV S+ PP K
Sbjct: 324 D-----------SSDESDSSSEE-------EKKPPTKAVV---------SKATTKPPPAK 356
Query: 576 PQSVTVRLSSKEPNQKDDGVFKAPAPPSKVIK 607
+ + SS + +DD +AP+ P+ K
Sbjct: 357 KAAESSSDSSDSDSSEDD---EAPSKPAGTTK 385
Score = 35.8 bits (81), Expect = 0.25
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 23/160 (14%)
Query: 456 DDLSESEDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTE 515
D SE E ++ ++ T K +TK P P+ P +N + S S ++++ + D +E
Sbjct: 172 DSSSEDEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSE 231
Query: 516 DLPGVPESVKKPINKQGDKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSEELPGPPVVK 575
+ + KK + K K+ K +PT+ ++ + + EE
Sbjct: 232 E-EKAAATPKKTVPK-----KQVVAKAPVKAATTPTRKSSSSEDSSSDEEEE-------- 277
Query: 576 PQSVTVRLSSKEPNQKDDGVFKAPAPPSKVIKTVTIPTQP 615
K+P + G + + PPS ++ TQP
Sbjct: 278 ---------QKKPMKNKPGPYSSVPPPSAPPPKKSLGTQP 308
Score = 35.0 bits (79), Expect = 0.42
Identities = 44/190 (23%), Positives = 68/190 (35%), Gaps = 36/190 (18%)
Query: 461 SEDDEDDDCQVERKTSKKRTKTAPS---------PSLQPPPESNDNSQDSQSGTNNAENL 511
S +E+ E KT K T P P+ Q P S D+S DS S ++ E
Sbjct: 424 SSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEE 483
Query: 512 DFTED-------------LPGVPESVKK------PINKQGDKSKENTRKIF-------SG 545
++ P P S KK + D S+E K+
Sbjct: 484 KTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPRPQA 543
Query: 546 PKRSPTKAVYNARHWNHPDSEELPGPPVVKPQSVTVRLSSKEPNQKDDGVFKAPAPPSKV 605
PK + T A+ A++ + E K V + S + ++++ +A P +K
Sbjct: 544 PKANGTSAL-TAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKK 602
Query: 606 IKTVTIPTQP 615
IK T T P
Sbjct: 603 IKLQTPNTFP 612
Score = 31.2 bits (69), Expect = 6.1
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 15/130 (11%)
Query: 459 SESEDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDLP 518
S+SED +++ +V+ +KK A L PP ++ + +S S ++++ D ED
Sbjct: 85 SDSEDSSEEEEEVQGPPAKKAAVPAKRVGL-PPGKAAAKASESSSSEESSDD-DDEEDQK 142
Query: 519 GVPESVKKPINKQGDKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSEELPGPPVVKPQS 578
P V+K + Q +K +K S S + + +E P K
Sbjct: 143 KQP--VQKGVKPQAKAAKAPPKKAKSSDSDSDSSS-----------EDEPPKNQKPKITP 189
Query: 579 VTVRLSSKEP 588
VTV+ +K P
Sbjct: 190 VTVKAQTKAP 199
>gi|122937261 coiled-coil domain containing 85A [Homo sapiens]
Length = 553
Score = 36.6 bits (83), Expect = 0.15
Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 30/168 (17%)
Query: 420 SKKDVKLEFFGFEDHETGGDEGGSGSS-------------------NYKIKYFGFDDLSE 460
S + +K + G DH+ GG GGSG S +++ Y G ++ S
Sbjct: 358 SPEHLKQHYGGSPDHKHGGGSGGSGGSGGGSREGTLRRQAQEDGSPHHRNVYSGMNE-ST 416
Query: 461 SEDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTED---- 516
+ +V + + R S + + PP N ++ + G+ L + +
Sbjct: 417 LSYVRQLEARVRQLEEENRMLPQASQNRRQPPTRNSSNMEKGWGSRARRVLQWWQGCRGI 476
Query: 517 ---LPGVPESVKKPINKQGDKSKENTRKIFSG---PKRSPTKAVYNAR 558
LP +P S + G S N+ FSG P + P V++ +
Sbjct: 477 GRCLPTLPGSFRLSSGADGSNSSPNSAASFSGHATPSQQPEPVVHSLK 524
>gi|119943093 glycogenin 2 isoform a [Homo sapiens]
Length = 470
Score = 36.2 bits (82), Expect = 0.19
Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 44 LGQKRPNFKPDIQEIPKKPKVEEESTGDPFGFDSDDESLPVSSKNLAQVKCSSYSE-SSE 102
LG +P Q +P+ ++ +E+ P G S+D ++ A + C S+ S +
Sbjct: 316 LGSNQP-----AQGLPEPTQIVDETLSLPEGRRSEDMIACPETETPAVITCDPLSQPSPQ 370
Query: 103 AAQLEEVTSVLEANSKISHVVVEDTVVSDKCFPLEDTLLGKEKSTNRIVEDDASISSCNK 162
A E ++L+ +K+ V E+T + P E ++ S +E D ++ S ++
Sbjct: 371 PADFTETETILQPANKVESVSSEETFEPSQELPAEAL---RDPSLQDALEVDLAV-SVSQ 426
Query: 163 LITSDKVENFHEEHEK 178
+ +KV+ E E+
Sbjct: 427 ISIEEKVKELSPEEER 442
>gi|119964690 glycogenin 2 isoform b [Homo sapiens]
Length = 501
Score = 36.2 bits (82), Expect = 0.19
Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 44 LGQKRPNFKPDIQEIPKKPKVEEESTGDPFGFDSDDESLPVSSKNLAQVKCSSYSE-SSE 102
LG +P Q +P+ ++ +E+ P G S+D ++ A + C S+ S +
Sbjct: 347 LGSNQP-----AQGLPEPTQIVDETLSLPEGRRSEDMIACPETETPAVITCDPLSQPSPQ 401
Query: 103 AAQLEEVTSVLEANSKISHVVVEDTVVSDKCFPLEDTLLGKEKSTNRIVEDDASISSCNK 162
A E ++L+ +K+ V E+T + P E ++ S +E D ++ S ++
Sbjct: 402 PADFTETETILQPANKVESVSSEETFEPSQELPAEAL---RDPSLQDALEVDLAV-SVSQ 457
Query: 163 LITSDKVENFHEEHEK 178
+ +KV+ E E+
Sbjct: 458 ISIEEKVKELSPEEER 473
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 35.8 bits (81), Expect = 0.25
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 479 RTKTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQGDKSKEN 538
R P+PS PP++ D +++ S N++E+ D+ PG K P N QG S ++
Sbjct: 749 RVSPPPAPS---PPKAPDTNKEDDSKDNDSES-DYMFMAPGAGAIPKNPRNPQGGSSSKS 804
Query: 539 TRKIFSGP 546
FS P
Sbjct: 805 WSSYFSLP 812
>gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]
Length = 681
Score = 35.8 bits (81), Expect = 0.25
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 28/111 (25%)
Query: 414 RPSNTKSKKDVKLEFFGFEDHETGGDEGG--------SGSSNYKIKYFGFDDLSESEDD- 464
+ N + ++D+ FED ++ DEGG SG S+ +KY F D ES++D
Sbjct: 224 KDDNDEEEEDIDF----FEDIDSDEDEGGLFGSKKLKSGKSSRNLKYKDFFDPVESDEDI 279
Query: 465 ------------EDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQS 503
EDD+ E ++T LQ E+ DN Q +S
Sbjct: 280 TNVHDDELDSNKEDDEIAEEEAEELSISETDEDDDLQ---ENEDNKQHKES 327
>gi|38016937 lemur tyrosine kinase 2 [Homo sapiens]
Length = 1503
Score = 35.8 bits (81), Expect = 0.25
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 32/211 (15%)
Query: 62 PKVEEESTGDPFGFDSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKISH 121
P++ +E PF D S KNL V+ + S +AA+ + S L ++S
Sbjct: 919 PELGQELHNKPFS--EDHHSHRRLEKNLEAVETLNQLNSKDAAKEAGLVSALSSDSTSQD 976
Query: 122 VVVEDTVVSDKCFPLEDTLLGKEKSTNRIVEDDASISSC-----NKLITSDKVENFHEEH 176
++ED++ + FP + L S + +A + S KL+ DK + E
Sbjct: 977 SLLEDSLSAP--FPASEPSLETPDSLESVDVHEALLDSLGSHTPQKLVPPDKPADSGYET 1034
Query: 177 EKNSHHIHKNADDSTKKPNAETTVASEIKETNDTWNSQFGKRP----------ESPSEIS 226
E + + + T P E T SE T D +S P +E++
Sbjct: 1035 E------NLESPEWTLHPAPEGTADSEPATTGDGGHSGLPPNPVIVISDAGDGHRGTEVT 1088
Query: 227 P------IKGSVRTGLFEWDNDFE-DIRSED 250
P +GS R + DND E + RSE+
Sbjct: 1089 PETFTAGSQGSYRDSAYFSDNDSEPEKRSEE 1119
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 35.8 bits (81), Expect = 0.25
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 25/144 (17%)
Query: 416 SNTKSKKDVKLEFFGFEDHETGG----DEGGSGSSNYK------------IKYFGFDDLS 459
S+ SK++V E +G DHETG DE G+ + N + ++ +D
Sbjct: 166 SSQSSKEEVNSEEYG-SDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEE 224
Query: 460 ESED--DEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDL 517
ED +E+++ + E + ++ + E ND S++ + +E++ FT+
Sbjct: 225 VDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDG- 283
Query: 518 PGVPESVKKPINKQGDKSKENTRK 541
SV+ G K+ RK
Sbjct: 284 -----SVRSGSGTDGSDEKKKERK 302
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 35.8 bits (81), Expect = 0.25
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 25/144 (17%)
Query: 416 SNTKSKKDVKLEFFGFEDHETGG----DEGGSGSSNYK------------IKYFGFDDLS 459
S+ SK++V E +G DHETG DE G+ + N + ++ +D
Sbjct: 166 SSQSSKEEVNSEEYG-SDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEE 224
Query: 460 ESED--DEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDL 517
ED +E+++ + E + ++ + E ND S++ + +E++ FT+
Sbjct: 225 VDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDG- 283
Query: 518 PGVPESVKKPINKQGDKSKENTRK 541
SV+ G K+ RK
Sbjct: 284 -----SVRSGSGTDGSDEKKKERK 302
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 35.4 bits (80), Expect = 0.33
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 37/238 (15%)
Query: 456 DDLSESED------DEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAE 509
D SE+ D D +V + + T +P S + P Q+SQ+G N+
Sbjct: 675 DSKSEAPDPTQKAWSRSDSDEVPPRVPVRTTSRSPVLSRRDSPLQGSGQQNSQAGQRNST 734
Query: 510 NLDFTEDLPGVPESVKKPINKQGDKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSEELP 569
+ + + + E V+K + + G S + S P +HP S+
Sbjct: 735 S---SIEPRLLWERVEKLVPRPGSGSSSGSSNSGSQPG-------------SHPGSQSGS 778
Query: 570 GPPVVKPQSVTVRLSSKE---PNQKDDGVFKAPAPPSKVIKTVTIPTQPYQDI-VTAL-K 624
G + VR SSK P+Q+ + K P +V + P +P ++ +TAL K
Sbjct: 779 G------ERFRVRSSSKSEGSPSQRLENAVKKPEDKKEVFR----PLKPAGEVDLTALAK 828
Query: 625 CRREDKELYTVVQHVKHFNDVVEFGENQEFTDDIEYLLSGLKSTQPLNTRCLSVISLA 682
R +++ + + + E G E DD+E + ++ P +TR S ++L+
Sbjct: 829 ELRAVEDVRPPHKVTDYSSSSEESGTTDEEDDDVEQEGADESTSGPEDTRAASSLNLS 886
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 35.0 bits (79), Expect = 0.42
Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 21/216 (9%)
Query: 147 TNRIVEDDASISSCNKLITSDKVENFHEEHEKNSHHIHKNADDSTKKPNAETTVASEIKE 206
T EDD+ S + E E+N + K+ D+ + V + E
Sbjct: 536 TKESEEDDSEKESDEDCSEKQSEDGSEREFEENG--LEKDLDEEGSEKELHENVLDKELE 593
Query: 207 TNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWDNDFEDIRSEDCILSLDSDPLLEMKDD 266
ND+ NS+F + ++ +GS R F+ D+D E ED + D E +D+
Sbjct: 594 ENDSENSEF--EDDGSEKVLDEEGSERE--FDEDSD-EKEEEEDTYEKVFDDESDEKEDE 648
Query: 267 DFKNR--LENLNEAIEEDIVQSVL---------RPTNCRTYCRANKTKSSQGASN---FD 312
++ + LE ++ EE L + + A++ SN FD
Sbjct: 649 EYADEKGLEAADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFD 708
Query: 313 KLMDGTSQALAKANSESSKDGLNQAKKGGVSCGTSF 348
+ D + + ++ + G ++G +S G+SF
Sbjct: 709 EEEDSSEKLFDDSDERGTLGGFGSVEEGPLSTGSSF 744
Score = 32.3 bits (72), Expect = 2.8
Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 21/160 (13%)
Query: 174 EEHEKNSHHIHKNADDSTKKPNAETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVR 233
++ + + + + +DS KK + + T+ ++ +E S+ ES E+ P K S
Sbjct: 482 QKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESE- 540
Query: 234 TGLFEWDNDFEDIRSEDCILSLDSD-PLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTN 292
++D E EDC D E +++ + L+ E E+++ ++VL
Sbjct: 541 ------EDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLD--EEGSEKELHENVL---- 588
Query: 293 CRTYCRANKTKSSQGASNFDKLMDGTSQALAKANSESSKD 332
+K + N + DG+ + L + SE D
Sbjct: 589 -------DKELEENDSENSEFEDDGSEKVLDEEGSEREFD 621
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 35.0 bits (79), Expect = 0.42
Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 21/216 (9%)
Query: 147 TNRIVEDDASISSCNKLITSDKVENFHEEHEKNSHHIHKNADDSTKKPNAETTVASEIKE 206
T EDD+ S + E E+N + K+ D+ + V + E
Sbjct: 536 TKESEEDDSEKESDEDCSEKQSEDGSEREFEENG--LEKDLDEEGSEKELHENVLDKELE 593
Query: 207 TNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWDNDFEDIRSEDCILSLDSDPLLEMKDD 266
ND+ NS+F + ++ +GS R F+ D+D E ED + D E +D+
Sbjct: 594 ENDSENSEF--EDDGSEKVLDEEGSERE--FDEDSD-EKEEEEDTYEKVFDDESDEKEDE 648
Query: 267 DFKNR--LENLNEAIEEDIVQSVL---------RPTNCRTYCRANKTKSSQGASN---FD 312
++ + LE ++ EE L + + A++ SN FD
Sbjct: 649 EYADEKGLEAADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFD 708
Query: 313 KLMDGTSQALAKANSESSKDGLNQAKKGGVSCGTSF 348
+ D + + ++ + G ++G +S G+SF
Sbjct: 709 EEEDSSEKLFDDSDERGTLGGFGSVEEGPLSTGSSF 744
Score = 32.3 bits (72), Expect = 2.8
Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 21/160 (13%)
Query: 174 EEHEKNSHHIHKNADDSTKKPNAETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVR 233
++ + + + + +DS KK + + T+ ++ +E S+ ES E+ P K S
Sbjct: 482 QKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESE- 540
Query: 234 TGLFEWDNDFEDIRSEDCILSLDSD-PLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTN 292
++D E EDC D E +++ + L+ E E+++ ++VL
Sbjct: 541 ------EDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLD--EEGSEKELHENVL---- 588
Query: 293 CRTYCRANKTKSSQGASNFDKLMDGTSQALAKANSESSKD 332
+K + N + DG+ + L + SE D
Sbjct: 589 -------DKELEENDSENSEFEDDGSEKVLDEEGSEREFD 621
>gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens]
Length = 259
Score = 35.0 bits (79), Expect = 0.42
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 456 DDLSESEDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQ-SGTNNAENLDFT 514
DD + +DD DD+ E+ KK + P+ + Q +SN N +DS+ S T ++ +
Sbjct: 172 DDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQ---KSNQNGKDSKPSSTPRSKGQESF 228
Query: 515 EDLPGVPESVKKPINKQGDKSK 536
+ P++ K P + + K+K
Sbjct: 229 KKQEKTPKTPKGPSSVEDIKAK 250
Score = 31.6 bits (70), Expect = 4.7
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 459 SESEDDEDDDCQVERKTSKKRT----KTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFT 514
+ESED+E++D ++ + K+ P ++ + +D+ D + + ++ DF
Sbjct: 123 AESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDDFD 182
Query: 515 EDLPGVPESVKKPIN----KQGDKSKENTRKIFSGPKRSP 550
++ VKK I K KS +N + S P +P
Sbjct: 183 DEEAEEKAPVKKSIRDTPAKNAQKSNQNGKD--SKPSSTP 220
>gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]
Length = 294
Score = 35.0 bits (79), Expect = 0.42
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 456 DDLSESEDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQ-SGTNNAENLDFT 514
DD + +DD DD+ E+ KK + P+ + Q +SN N +DS+ S T ++ +
Sbjct: 172 DDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQ---KSNQNGKDSKPSSTPRSKGQESF 228
Query: 515 EDLPGVPESVKKPINKQGDKSK 536
+ P++ K P + + K+K
Sbjct: 229 KKQEKTPKTPKGPSSVEDIKAK 250
Score = 31.6 bits (70), Expect = 4.7
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 459 SESEDDEDDDCQVERKTSKKRT----KTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFT 514
+ESED+E++D ++ + K+ P ++ + +D+ D + + ++ DF
Sbjct: 123 AESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDDFD 182
Query: 515 EDLPGVPESVKKPIN----KQGDKSKENTRKIFSGPKRSP 550
++ VKK I K KS +N + S P +P
Sbjct: 183 DEEAEEKAPVKKSIRDTPAKNAQKSNQNGKD--SKPSSTP 220
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 35.0 bits (79), Expect = 0.42
Identities = 49/244 (20%), Positives = 80/244 (32%), Gaps = 42/244 (17%)
Query: 438 GDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVERKTSKKRTKTAPSPSLQP--PPESN 495
G + S N+ Y +L E + ER +K+ K + S + PP
Sbjct: 642 GSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVE 701
Query: 496 DNSQDSQSGTNNAENL----DFTEDLPGVPESVKKPINKQGDKSKENTRKIFSGPKRSPT 551
D ++ + N E + + T + ES+ P + + +N GPK T
Sbjct: 702 DEEMEASGVSGNEEEMVEEAEATVNNSSDTESIPSPHTEAAKDTGQN------GPKPPAT 755
Query: 552 KAVYNARHWNHPDSEELPGPPVVKPQSVTVRLSSKEPNQKDDGVFKAPAPPSKVIKTVTI 611
PGPP P+ + ++ PAPPS +
Sbjct: 756 LGADGPP----------PGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV 805
Query: 612 PTQPYQDIVTALKCRREDKELYTVVQHVKHFNDVVEFGENQEFTDDIEYLLSGLKSTQPL 671
P +E+KE T VE GE Q+ E + K+ +P+
Sbjct: 806 P--------------KEEKEEETAAA------PPVEEGEEQKPPAAEELAVDTGKAEEPV 845
Query: 672 NTRC 675
+ C
Sbjct: 846 KSEC 849
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 35.0 bits (79), Expect = 0.42
Identities = 88/440 (20%), Positives = 172/440 (39%), Gaps = 62/440 (14%)
Query: 190 STKKPNAETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSV----RTGLFEWDNDFED 245
STK+ A+ T +S +D NS G+ +I P+ ++ TG + D +
Sbjct: 1154 STKRKQADITSSSSSDIEDDDQNS-IGEGSSDEQKIKPVTENLVLSSHTGFCQSSGD--E 1210
Query: 246 IRSEDCILSLDSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNCRTYCRANKTKSS 305
S+ +++D D D+D +NR+ + + E+I ++ + + + K
Sbjct: 1211 ALSKSVPVTVDDDD----DDNDPENRIAK--KMLLEEIKANLSSDEDGSSDDEPEEGKKR 1264
Query: 306 QGASNFDKLMDGTSQALAKANSESSKDGLNQAK----------KGGVSCGTSFRGTVGRT 355
G N + G +A + NSES D K K VS G S +
Sbjct: 1265 TGKQNEEN--PGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKP 1322
Query: 356 RDYTVL---HPSCLSVCNVTIQDTMERSMDEFTASTPADLGEAGRLRKKADIATSKTTTR 412
+++ + + +S + D E + E + + + R KKA++ ++ + +
Sbjct: 1323 KEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYK 1382
Query: 413 FRPSNTKSKKDVKLEFFGFEDHETGGDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVE 472
+ K ++ +K++ ++++ +E + + ++ E E+DE+DD +
Sbjct: 1383 QK----KKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEE---EEEEEEEEDENDDSKSP 1435
Query: 473 RKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQG 532
K KK K L ++ T NA + E +K I ++
Sbjct: 1436 GKGRKKIRKILKDDKL-------------RTETQNALKEE---------EERRKRIAER- 1472
Query: 533 DKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSEELPGPPVVKPQSVTVRLSSKEPNQKD 592
++ +E R++ SPTK + D EE P V +++ ++L +P+Q D
Sbjct: 1473 EREREKLREVIEIEDASPTKCPITTKLVLDED-EETKEPLVQVHRNMVIKL---KPHQVD 1528
Query: 593 DGVFKAPAPPSKVIKTVTIP 612
F V KT P
Sbjct: 1529 GVQFMWDCCCESVKKTKKSP 1548
Score = 31.2 bits (69), Expect = 6.1
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 454 GFDDLSES---EDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAEN 510
G D++E +D D+ + ++K SKK T+ PS + Q +S ++ E
Sbjct: 922 GLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPS-DFKKKVIKMEQQYESSSDGTEK 980
Query: 511 LDFTEDLPGVPESVKKPINKQGDKSKENTR 540
L E++ P+ +K+ N D K++ +
Sbjct: 981 LPEREEICHFPKGIKQIKNGTTDGEKKSKK 1010
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 35.0 bits (79), Expect = 0.42
Identities = 88/440 (20%), Positives = 172/440 (39%), Gaps = 62/440 (14%)
Query: 190 STKKPNAETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSV----RTGLFEWDNDFED 245
STK+ A+ T +S +D NS G+ +I P+ ++ TG + D +
Sbjct: 1192 STKRKQADITSSSSSDIEDDDQNS-IGEGSSDEQKIKPVTENLVLSSHTGFCQSSGD--E 1248
Query: 246 IRSEDCILSLDSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNCRTYCRANKTKSS 305
S+ +++D D D+D +NR+ + + E+I ++ + + + K
Sbjct: 1249 ALSKSVPVTVDDDD----DDNDPENRIAK--KMLLEEIKANLSSDEDGSSDDEPEEGKKR 1302
Query: 306 QGASNFDKLMDGTSQALAKANSESSKDGLNQAK----------KGGVSCGTSFRGTVGRT 355
G N + G +A + NSES D K K VS G S +
Sbjct: 1303 TGKQNEEN--PGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKP 1360
Query: 356 RDYTVL---HPSCLSVCNVTIQDTMERSMDEFTASTPADLGEAGRLRKKADIATSKTTTR 412
+++ + + +S + D E + E + + + R KKA++ ++ + +
Sbjct: 1361 KEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYK 1420
Query: 413 FRPSNTKSKKDVKLEFFGFEDHETGGDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVE 472
+ K ++ +K++ ++++ +E + + ++ E E+DE+DD +
Sbjct: 1421 QK----KKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEE---EEEEEEEEDENDDSKSP 1473
Query: 473 RKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQG 532
K KK K L ++ T NA + E +K I ++
Sbjct: 1474 GKGRKKIRKILKDDKL-------------RTETQNALKEE---------EERRKRIAER- 1510
Query: 533 DKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSEELPGPPVVKPQSVTVRLSSKEPNQKD 592
++ +E R++ SPTK + D EE P V +++ ++L +P+Q D
Sbjct: 1511 EREREKLREVIEIEDASPTKCPITTKLVLDED-EETKEPLVQVHRNMVIKL---KPHQVD 1566
Query: 593 DGVFKAPAPPSKVIKTVTIP 612
F V KT P
Sbjct: 1567 GVQFMWDCCCESVKKTKKSP 1586
Score = 31.2 bits (69), Expect = 6.1
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 454 GFDDLSES---EDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAEN 510
G D++E +D D+ + ++K SKK T+ PS + Q +S ++ E
Sbjct: 960 GLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPS-DFKKKVIKMEQQYESSSDGTEK 1018
Query: 511 LDFTEDLPGVPESVKKPINKQGDKSKENTR 540
L E++ P+ +K+ N D K++ +
Sbjct: 1019 LPEREEICHFPKGIKQIKNGTTDGEKKSKK 1048
>gi|117414154 sodium channel associated protein 2 isoform b [Homo
sapiens]
Length = 939
Score = 35.0 bits (79), Expect = 0.42
Identities = 31/158 (19%), Positives = 61/158 (38%), Gaps = 1/158 (0%)
Query: 136 LEDTLLGKEKSTNRIVEDDASISSCNKLITSDKVENFHEEHEKNSHHIHKNADDSTKKPN 195
L+D L K++ R+ E I C + +K E EK H ++ + ++
Sbjct: 736 LKDCLQEKDEHIKRLQEKITEIEKCTQEQLDEKSSQLDEVLEKLERH-NERKEKLKQQLK 794
Query: 196 AETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWDNDFEDIRSEDCILSL 255
+ EI++ T N ++ + E + V+ + + R + L
Sbjct: 795 GKEVELEEIRKAYSTLNRKWHDKGELLCHLETQVKEVKEKFENKEKKLKAERDKSIELQK 854
Query: 256 DSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNC 293
++ L DD FK +++ + EA + +I Q C
Sbjct: 855 NAMEKLHSMDDAFKRQVDAIVEAHQAEIAQLANEKQKC 892
>gi|117414162 sodium channel associated protein 2 isoform a [Homo
sapiens]
Length = 1032
Score = 35.0 bits (79), Expect = 0.42
Identities = 31/158 (19%), Positives = 61/158 (38%), Gaps = 1/158 (0%)
Query: 136 LEDTLLGKEKSTNRIVEDDASISSCNKLITSDKVENFHEEHEKNSHHIHKNADDSTKKPN 195
L+D L K++ R+ E I C + +K E EK H ++ + ++
Sbjct: 829 LKDCLQEKDEHIKRLQEKITEIEKCTQEQLDEKSSQLDEVLEKLERH-NERKEKLKQQLK 887
Query: 196 AETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWDNDFEDIRSEDCILSL 255
+ EI++ T N ++ + E + V+ + + R + L
Sbjct: 888 GKEVELEEIRKAYSTLNRKWHDKGELLCHLETQVKEVKEKFENKEKKLKAERDKSIELQK 947
Query: 256 DSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNC 293
++ L DD FK +++ + EA + +I Q C
Sbjct: 948 NAMEKLHSMDDAFKRQVDAIVEAHQAEIAQLANEKQKC 985
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 35.0 bits (79), Expect = 0.42
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 10/145 (6%)
Query: 114 EANSKISHVVVEDTVVSDKCFPLEDTLLGKEKSTNRIVEDDASISSCNKLITSDKVENFH 173
E +SK+ V+ + C LE ++G+ K N + + SC+ +VE
Sbjct: 1806 ELDSKLHLQEVQLMTKIEACIELEK-IVGELKKENSDLSEKLEYFSCDHQELLQRVET-- 1862
Query: 174 EEHEKNSHHIHKNADDSTKKPNAETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVR 233
E + + +AD S+++ + + + ND+W +F S I K S+
Sbjct: 1863 --SEGLNSDLEMHADKSSRED-----IGDNVAKVNDSWKERFLDVENELSRIRSEKASIE 1915
Query: 234 TGLFEWDNDFEDIRSEDCILSLDSD 258
+ D E +++E L D++
Sbjct: 1916 HEALYLEADLEVVQTEKLCLEKDNE 1940
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,322,446
Number of Sequences: 37866
Number of extensions: 2222804
Number of successful extensions: 10011
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 9464
Number of HSP's gapped (non-prelim): 673
length of query: 1190
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1076
effective length of database: 13,930,794
effective search space: 14989534344
effective search space used: 14989534344
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.