CCDC85A 2556

Name: CCDC85A	Sequence: fasta or formatted (553aa)		NCBI GI: 122937261
Description: coiled-coil domain containing 85A		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 42 8 C cysteine 2.2 12 2 D aspartate 3.8 21 3 E glutamate 7.8 43 3 F phenylalanine 0.7 4 1 G glycine 10.1 56 3 H histidine 5.8 32 2 I isoleucine 1.3 7 1 K lysine 5.8 32 1 L leucine 8.7 48 2 M methionine 1.4 8 1 N asparagine 2.5 14 1 P proline 7.4 41 2 Q glutamine 5.6 31 2 R arginine 7.8 43 2 S serine 12.7 70 2 T threonine 2.5 14 1 V valine 4.0 22 2 W tryptophan 1.1 6 2 Y tyrosine 1.3 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 85A CCDC85C 0.206 coiled-coil domain containing 85C CCDC85B 0.126 hepatitis delta antigen-interacting protein A HRNR 0.025 hornerin SRRM1 0.023 serine/arginine repetitive matrix 1 BUD13 0.022 BUD13 homolog isoform 1 NIPBL 0.022 delangin isoform B NIPBL 0.022 delangin isoform A MAF 0.022 v-maf musculoaponeurotic fibrosarcoma oncogene homol... MAF 0.022 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... ZNF828 0.022 zinc finger protein 828 ZNF469 0.022 zinc finger protein 469 MARK4 0.022 MAP/microtubule affinity-regulating kinase 4 SRRM2 0.022 splicing coactivator subunit SRm300 RUFY1 0.021 RUN and FYVE domain-containing 1 isoform b RUFY1 0.021 RUN and FYVE domain-containing 1 isoform b RUFY1 0.021 RUN and FYVE domain-containing 1 isoform a LOC338758 0.020 PREDICTED: hypothetical protein LOC338758 0.020 PREDICTED: hypothetical protein LOC338758 0.020 PREDICTED: hypothetical protein C2orf16 0.020 hypothetical protein LOC84226 LOC100170229 0.020 hypothetical protein LOC100170229 CCNL1 0.020 cyclin L1 SPTY2D1 0.020 SPT2, Suppressor of Ty, domain containing 1 SHANK1 0.019 SH3 and multiple ankyrin repeat domains 1 BUD13 0.019 BUD13 homolog isoform 2 HRG 0.019 histidine-rich glycoprotein precursor TBKBP1 0.018 TBK1 binding protein 1 IQSEC2 0.017 IQ motif and Sec7 domain 2 isoform1 IWS1 0.017 IWS1 homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.