Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GYG2 Sequence: fasta or formatted (470aa) NCBI GI: 119943093
Description:

glycogenin 2 isoform a

Referenced in:

Glycogen

Other entries for this name:
alt prot [501aa] glycogenin 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         33           2
 C cysteine            2.1         10           1
 D aspartate           5.5         26           1
 E glutamate           7.2         34           3
 F phenylalanine       4.5         21           2
 G glycine             5.3         25           2
 H histidine           3.2         15           1
 I isoleucine          3.4         16           1
 K lysine              3.8         18           1
 L leucine            10.9         51           3
 M methionine          1.3          6           1
 N asparagine          3.4         16           2
 P proline             6.8         32           1
 Q glutamine           5.3         25           1
 R arginine            3.6         17           2
 S serine             10.2         48           3
 T threonine           5.7         27           2
 V valine              6.8         32           2
 W tryptophan          1.5          7           2
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycogenin 2 isoform a 
GYG2                  0.999   glycogenin 2 isoform b 
GYG1                  0.371   glycogenin 1 
EP300                 0.015   E1A binding protein p300 
DGKK                  0.015   diacylglycerol kinase kappa 
EIF3A                 0.013   eukaryotic translation initiation factor 3, subunit 1...
RIMBP3B               0.012   RIMS binding protein 3B 
RIMBP3C               0.012   RIMS binding protein 3C 
RIMBP3                0.012   DKFZP434H0735 protein 
WAPAL                 0.012   wings apart-like homolog 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
TACC1                 0.011   transforming, acidic coiled-coil containing protein...
NHS                   0.011   Nance-Horan syndrome protein isoform 1 
RP1L1                 0.011   retinitis pigmentosa 1-like 1 
KIAA0754              0.010   hypothetical protein LOC643314 
SYNPO                 0.010   synaptopodin isoform B 
SYNPO                 0.010   synaptopodin isoform A 
ANKRD11               0.010   ankyrin repeat domain 11 
LOC727838             0.010   PREDICTED: similar to cancer/testis antigen family ...
CREBBP                0.010   CREB binding protein isoform b 
CREBBP                0.010   CREB binding protein isoform a 
UBXN4                 0.010   UBX domain containing 2 
ANKRD33B              0.009   PREDICTED: ankyrin repeat domain 33B 
NEFH                  0.009   neurofilament, heavy polypeptide 200kDa 
FGD1                  0.009   faciogenital dysplasia protein 
HISPPD2A              0.009   histidine acid phosphatase domain containing 2A iso...
HISPPD2A              0.009   histidine acid phosphatase domain containing 2A iso...
HISPPD2A              0.009   histidine acid phosphatase domain containing 2A isof...
HISPPD2A              0.009   histidine acid phosphatase domain containing 2A isof...
MUC16                 0.009   mucin 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press