Guide to the Human Genome
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Name: GYG2 Sequence: fasta or formatted (501aa) NCBI GI: 119964690
Description:

glycogenin 2 isoform b

Referenced in:

Glycogen

Other entries for this name:
alt prot [470aa] glycogenin 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         37           2
 C cysteine            2.0         10           1
 D aspartate           5.2         26           1
 E glutamate           7.4         37           3
 F phenylalanine       4.4         22           2
 G glycine             5.6         28           2
 H histidine           3.4         17           2
 I isoleucine          3.2         16           1
 K lysine              3.6         18           1
 L leucine            10.8         54           3
 M methionine          1.4          7           1
 N asparagine          3.4         17           2
 P proline             6.6         33           1
 Q glutamine           5.4         27           1
 R arginine            3.6         18           2
 S serine             10.8         54           3
 T threonine           6.0         30           2
 V valine              6.4         32           2
 W tryptophan          1.4          7           2
 Y tyrosine            2.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycogenin 2 isoform b 
GYG2                  0.938   glycogenin 2 isoform a 
GYG1                  0.348   glycogenin 1 
STAP2                 0.023   signal transducing adaptor family member 2 isoform 1...
CNGA1                 0.022   cyclic nucleotide gated channel alpha 1 isoform 1 [...
SULT1C2               0.021   sulfotransferase family, cytosolic, 1C, member 1 iso...
PODXL                 0.020   podocalyxin-like isoform 1 precursor 
LOC100288773          0.019   PREDICTED: hypothetical protein XP_002343911 
LOC100128260          0.019   PREDICTED: hCG_1742852 
C9orf37               0.018   chromosome 9 open reading frame 37 
LOC100128260          0.017   PREDICTED: hCG_1742852 
LOC100128260          0.017   PREDICTED: hCG_1742852 
C14orf178             0.017   hypothetical protein LOC283579 
FLJ25363              0.017   hypothetical protein LOC401082 
ZNF195                0.017   zinc finger protein 195 isoform 2 
ZNF195                0.017   zinc finger protein 195 isoform 1 
C16orf89              0.016   hypothetical protein LOC146556 isoform 1 
REL                   0.015   v-rel reticuloendotheliosis viral oncogene homolog [H...
SUGT1                 0.015   suppressor of G2 allele of SKP1 isoform a 
EP300                 0.014   E1A binding protein p300 
DGKK                  0.014   diacylglycerol kinase kappa 
C15orf40              0.013   hypothetical protein LOC123207 isoform d 
GPR107                0.013   G protein-coupled receptor 107 isoform 1 
UTY                   0.012   tetratricopeptide repeat protein isoform 1 
EIF3A                 0.012   eukaryotic translation initiation factor 3, subunit 1...
LOC100132815          0.012   PREDICTED: hypothetical protein 
LOC100132815          0.012   PREDICTED: hypothetical protein 
LOC100132815          0.012   PREDICTED: hypothetical protein 
CHEK2                 0.012   protein kinase CHK2 isoform c 
RIMBP3B               0.011   RIMS binding protein 3B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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