BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|12669915 E2F transcription factor 4 [Homo sapiens] (413 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|12669915 E2F transcription factor 4 [Homo sapiens] 817 0.0 gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens] 352 4e-97 gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens] 351 6e-97 gi|4758226 E2F transcription factor 2 [Homo sapiens] 167 2e-41 gi|134142813 E2F transcription factor 5 isoform 3 [Homo sapiens] 157 2e-38 gi|4503433 E2F transcription factor 3 [Homo sapiens] 155 5e-38 gi|12669911 E2F transcription factor 1 [Homo sapiens] 137 2e-32 gi|109637795 E2F transcription factor 6 [Homo sapiens] 122 6e-28 gi|145580626 E2F transcription factor 7 [Homo sapiens] 55 9e-08 gi|55953110 retinoblastoma protein-binding zinc finger protein i... 55 9e-08 gi|20336260 retinoblastoma protein-binding zinc finger protein i... 55 9e-08 gi|20336258 retinoblastoma protein-binding zinc finger protein i... 55 9e-08 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 55 9e-08 gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 55 1e-07 gi|38505226 E2F family member 8 [Homo sapiens] 53 4e-07 gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 1e-06 gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 50 4e-06 gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 50 5e-06 gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 50 5e-06 gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 49 8e-06 gi|193083172 nuclear assembly factor 1 homolog isoform b [Homo s... 48 2e-05 gi|193083157 nuclear assembly factor 1 homolog isoform a [Homo s... 48 2e-05 gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 47 4e-05 gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 47 4e-05 gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 47 4e-05 gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 47 4e-05 gi|116284392 mucin 2 precursor [Homo sapiens] 47 4e-05 gi|55750053 atrophin-1 [Homo sapiens] 47 4e-05 gi|55750041 atrophin-1 [Homo sapiens] 47 4e-05 gi|222418647 mucin 7, secreted precursor [Homo sapiens] 46 5e-05 >gi|12669915 E2F transcription factor 4 [Homo sapiens] Length = 413 Score = 817 bits (2110), Expect = 0.0 Identities = 413/413 (100%), Positives = 413/413 (100%) Query: 1 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYD 60 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYD Sbjct: 1 MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYD 60 Query: 61 ITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVW 120 ITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVW Sbjct: 61 ITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVW 120 Query: 121 VQQSIRNVTEDVQNSCLAYVTHEDICRCFAGDTLLAIRAPSGTSLEVPIPEGLNGQKKYQ 180 VQQSIRNVTEDVQNSCLAYVTHEDICRCFAGDTLLAIRAPSGTSLEVPIPEGLNGQKKYQ Sbjct: 121 VQQSIRNVTEDVQNSCLAYVTHEDICRCFAGDTLLAIRAPSGTSLEVPIPEGLNGQKKYQ 180 Query: 181 IHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEAS 240 IHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEAS Sbjct: 181 IHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEAS 240 Query: 241 RPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQ 300 RPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQ Sbjct: 241 RPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQ 300 Query: 301 SSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTR 360 SSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTR Sbjct: 301 SSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTR 360 Query: 361 ECMSSELLEELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFDVPVLNL 413 ECMSSELLEELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFDVPVLNL Sbjct: 361 ECMSSELLEELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFDVPVLNL 413 >gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens] Length = 346 Score = 352 bits (903), Expect = 4e-97 Identities = 213/414 (51%), Positives = 251/414 (60%), Gaps = 108/414 (26%) Query: 6 PQAPPPP------GTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIY 59 PQ PPPP G SRHEKSLGLLTTKFVSLLQEAKDGVLDLK AADTLAVRQKRRIY Sbjct: 33 PQPPPPPQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIY 92 Query: 60 DITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKV 119 DITNVLEGI LIEKKSKNSIQWKGVG GCNT+E+ D+L LKAEIE+L+ +E+ELDQ K+ Sbjct: 93 DITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKL 152 Query: 120 WVQQSIRNVTEDVQNSCLAYVTHEDICRCFAGDTLLAIRAPSGTSLEVPIPE-GLNGQKK 178 W+QQSI+NV +D N+ +YVTHEDIC CF GDTLLAI+APSGT LEVPIPE G NGQKK Sbjct: 153 WLQQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKK 212 Query: 179 YQIHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQE 238 YQI+LKS SGPI VLL+NKE+ SS PV PVP PP + Sbjct: 213 YQINLKSHSGPIHVLLINKESSSSKPVVFPVP---------------PP---------DD 248 Query: 239 ASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRP 298 ++P+S LTP T K S +LP + ++ Sbjct: 249 LTQPSSQSLTPV-------------------------TPQKSSMATQNLPEQHVSERSQA 283 Query: 299 LQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDP 358 LQ ++ D SS+ S Sbjct: 284 LQQTSATDISSAGS---------------------------------------------- 297 Query: 359 TRECMSSELLEELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFDVPVLN 412 +S ++++ELMSS+VF PLLRLSP P D DY +NLD++EGVCDLFDV +LN Sbjct: 298 ----ISGDIIDELMSSDVF-PLLRLSPTPAD-DYNFNLDDNEGVCDLFDVQILN 345 >gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens] Length = 345 Score = 351 bits (901), Expect = 6e-97 Identities = 213/414 (51%), Positives = 250/414 (60%), Gaps = 109/414 (26%) Query: 6 PQAPPPP------GTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIY 59 PQ PPPP G SRHEKSLGLLTTKFVSLLQEAKDGVLDLK AADTLAVRQKRRIY Sbjct: 33 PQPPPPPQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIY 92 Query: 60 DITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKV 119 DITNVLEGI LIEKKSKNSIQWKGVG GCNT+E+ D+L LKAEIE+L+ +E+ELDQ K+ Sbjct: 93 DITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKL 152 Query: 120 WVQQSIRNVTEDVQNSCLAYVTHEDICRCFAGDTLLAIRAPSGTSLEVPIPE-GLNGQKK 178 W+QQSI+NV +D N+ +YVTHEDIC CF GDTLLAI+APSGT LEVPIPE G NGQKK Sbjct: 153 WLQQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKK 212 Query: 179 YQIHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQE 238 YQI+LKS SGPI VLL+NKE+ SS PV PV PPP + Sbjct: 213 YQINLKSHSGPIHVLLINKESSSSKPVVFPV---------------PPP---------DD 248 Query: 239 ASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRP 298 ++P+S LTP T K S +LP + ++ Sbjct: 249 LTQPSSQSLTPV-------------------------TPQKSSMATQNLPEQHVSERSQA 283 Query: 299 LQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDP 358 LQ ++ D SS S Sbjct: 284 LQQTSATDISSGS----------------------------------------------- 296 Query: 359 TRECMSSELLEELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFDVPVLN 412 +S ++++ELMSS+VF PLLRLSP P D DY +NLD++EGVCDLFDV +LN Sbjct: 297 ----ISGDIIDELMSSDVF-PLLRLSPTPAD-DYNFNLDDNEGVCDLFDVQILN 344 >gi|4758226 E2F transcription factor 2 [Homo sapiens] Length = 437 Score = 167 bits (423), Expect = 2e-41 Identities = 114/261 (43%), Positives = 148/261 (56%), Gaps = 19/261 (7%) Query: 6 PQAPPPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVL 65 P+ P PG +R++ SLGLLT KF+ LL E++DGVLDL AA+ L V QKRRIYDITNVL Sbjct: 118 PKTPKSPGEKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWAAEVLDV-QKRRIYDITNVL 176 Query: 66 EGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVWVQQSI 125 EGI LI KK+KN+IQW G G + K +L E++EL EQ LDQ S Sbjct: 177 EGIQLIRKKAKNNIQWVGRGMFEDPTR-PGKQQQLGQELKELMNTEQALDQLIQSCSLSF 235 Query: 126 RNVTEDVQNSCLAYVTHEDICRC--FAGDTLLAIRAPSGTSLEVPIPEGLNGQKKYQIHL 183 +++TED N LAYVT++DI F T++A++AP T LEVP + QI+L Sbjct: 236 KHLTEDKANKRLAYVTYQDIRAVGNFKEQTVIAVKAPPQTRLEVPD----RTEDNLQIYL 291 Query: 184 KSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPN 243 KS GPIEV L +E V P P E+ L S S + P P AQ ++ P+ Sbjct: 292 KSTQGPIEVYLCPEE------VQEPDSPSEEPLPSTSTL-----CPSPDSAQPSSSTDPS 340 Query: 244 SPQLTPTAVPGSAEVQGMAGP 264 + T ++VP A A P Sbjct: 341 IMEPTASSVPAPAPTPQQAPP 361 Score = 48.9 bits (115), Expect = 8e-06 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 5/120 (4%) Query: 291 PTTLDTRPLQSSALLDSSSSSSSSSSSSSNS--NSSSSSGPNPSTSFEPIKADPTGV-LE 347 P + PL S++ L S S+ SSS+ S ++SS P P+ + + P+ V LE Sbjct: 310 PDSPSEEPLPSTSTLCPSPDSAQPSSSTDPSIMEPTASSVPAPAPTPQQAPPPPSLVPLE 369 Query: 348 LPKELSEIFDPTRECMSSELLEELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFD 407 L E+ P + + L ++ +PL+ SP DY++ L+ EG+ DLFD Sbjct: 370 ATDSLLELPHPLLQQTEDQFLSPTLACS--SPLISFSPSLDQDDYLWGLEAGEGISDLFD 427 >gi|134142813 E2F transcription factor 5 isoform 3 [Homo sapiens] Length = 185 Score = 157 bits (397), Expect = 2e-38 Identities = 111/284 (39%), Positives = 139/284 (48%), Gaps = 102/284 (35%) Query: 130 EDVQNSCLAYVTHEDICRCFAGDTLLAIRAPSGTSLEVPIPE-GLNGQKKYQIHLKSVSG 188 +D N+ +YVTHEDIC CF GDTLLAI+APSGT LEVPIPE G NGQKKYQI+LKS SG Sbjct: 2 DDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSG 61 Query: 189 PIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLT 248 PI VLL+NKE+ SS PV PVP PP + ++P+S LT Sbjct: 62 PIHVLLINKESSSSKPVVFPVP---------------PP---------DDLTQPSSQSLT 97 Query: 249 PTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSS 308 P T K S +LP + ++ LQ ++ D S Sbjct: 98 PV-------------------------TPQKSSMATQNLPEQHVSERSQALQQTSATDIS 132 Query: 309 SSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELL 368 S+ S +S +++ Sbjct: 133 SAGS--------------------------------------------------ISGDII 142 Query: 369 EELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFDVPVLN 412 +ELMSS+VF PLLRLSP P D DY +NLD++EGVCDLFDV +LN Sbjct: 143 DELMSSDVF-PLLRLSPTPAD-DYNFNLDDNEGVCDLFDVQILN 184 >gi|4503433 E2F transcription factor 3 [Homo sapiens] Length = 465 Score = 155 bits (393), Expect = 5e-38 Identities = 105/261 (40%), Positives = 145/261 (55%), Gaps = 32/261 (12%) Query: 6 PQAPPPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVL 65 P+ P P +R++ SLGLLT KF+ LL ++ DGVLDL AA+ L V QKRRIYDITNVL Sbjct: 167 PKTPKSPSEKTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKV-QKRRIYDITNVL 225 Query: 66 EGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIE---LKAEIEELQQREQELDQHKVWVQ 122 EGI LI+KKSKN++QW GC+ E L + L E+ EL Q E++LD+ Sbjct: 226 EGIHLIKKKSKNNVQWM----GCSLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCT 281 Query: 123 QSIRNVTEDVQNSCLAYVTHEDICRC--FAGDTLLAIRAPSGTSLEVPIPEGLNGQKKYQ 180 ++ +TED +N LAYVT++DI + T++ ++AP T LEVP + + Q Sbjct: 282 LDLKLLTEDSENQRLAYVTYQDIRKISGLKDQTVIVVKAPPETRLEVP-----DSIESLQ 336 Query: 181 IHLKSVSGPIEVLLVNKEAWSSPPVA---------VPVPPPEDLLQSPS-------AVST 224 IHL S GPIEV L +E + P+ +P P +DL + S ++ Sbjct: 337 IHLASTQGPIEVYLCPEETETHSPMKTNNQDHNGNIPKPASKDLASTNSGHSDCSVSMGN 396 Query: 225 PPPLPKPA-LAQSQEASRPNS 244 PL PA L Q E P++ Sbjct: 397 LSPLASPANLLQQTEDQIPSN 417 Score = 38.1 bits (87), Expect = 0.015 Identities = 21/95 (22%), Positives = 42/95 (44%) Query: 313 SSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELLEELM 372 + + S +N+ +G P + + + + +G + + + + E+ + Sbjct: 355 TETHSPMKTNNQDHNGNIPKPASKDLASTNSGHSDCSVSMGNLSPLASPANLLQQTEDQI 414 Query: 373 SSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFD 407 S + P + L PP DY+ +L E EG+ DLFD Sbjct: 415 PSNLEGPFVNLLPPLLQEDYLLSLGEEEGISDLFD 449 >gi|12669911 E2F transcription factor 1 [Homo sapiens] Length = 437 Score = 137 bits (345), Expect = 2e-32 Identities = 129/398 (32%), Positives = 172/398 (43%), Gaps = 95/398 (23%) Query: 12 PGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLI 71 PG SR+E SL L T +F+ LL + DGV+DL AA+ L V QKRRIYDITNVLEGI LI Sbjct: 122 PGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKV-QKRRIYDITNVLEGIQLI 180 Query: 72 EKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVWVQQSIRNVTED 131 KKSKN IQW G T + +L L ++ +LQ+ EQ+LD +R ++ED Sbjct: 181 AKKSKNHIQWLG---SHTTVGVGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSED 237 Query: 132 VQNSCLAYVTHEDICRCF--AGDTLLAIRAPSGTSLEVPIPEGLNGQKKYQIHLKSVSGP 189 + LAYVT +D+ A ++ I+AP T L + ++ + +QI LKS GP Sbjct: 238 TDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQL-----QAVDSSENFQISLKSKQGP 292 Query: 190 IEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTP 249 I+V L PE+ + S TP SQE + + T Sbjct: 293 IDVFLC----------------PEETVGGISPGKTP----------SQEVTSEEENRATD 326 Query: 250 TAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSS 309 +A VS P + P++L T P QS L+ Sbjct: 327 SAT----------------IVSPPPSSP-------------PSSLTTDPSQSLLSLEQEP 357 Query: 310 SSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELLE 369 S S + P+ D L L E RE S L E Sbjct: 358 LLSRMGSLRA-----------------PVDEDRLSPLVAADSLLE---HVREDFSGLLPE 397 Query: 370 ELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFD 407 E +S LSPP DY + L+E EG+ DLFD Sbjct: 398 EFIS---------LSPPHEALDYHFGLEEGEGIRDLFD 426 >gi|109637795 E2F transcription factor 6 [Homo sapiens] Length = 281 Score = 122 bits (306), Expect = 6e-28 Identities = 73/184 (39%), Positives = 109/184 (59%), Gaps = 9/184 (4%) Query: 17 RHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSK 76 R + SL LT KF+ L++ A G+LDL A L VR KRR+YDITNVL+GI L+EKKSK Sbjct: 63 RFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVR-KRRVYDITNVLDGIDLVEKKSK 121 Query: 77 NSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSC 136 N I+W +G + + +L+ E+ +L E LD+ Q + +T+D +N Sbjct: 122 NHIRW--IGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENER 179 Query: 137 LAYVTHEDI--CRCFAGDTLLAIRAPSGTSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLL 194 LAYVT++DI + F ++A++AP+ T L+VP P + +H++S +GPI+V L Sbjct: 180 LAYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPR----EDSITVHIRSTNGPIDVYL 235 Query: 195 VNKE 198 E Sbjct: 236 CEVE 239 >gi|145580626 E2F transcription factor 7 [Homo sapiens] Length = 911 Score = 55.5 bits (132), Expect = 9e-08 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 6/110 (5%) Query: 15 PSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVR---QKRRIYDITNVLEGIGLI 71 PSR +KSLGLL KF++ ++ D +AV ++RRIYDI NVLE + L+ Sbjct: 140 PSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESLHLV 199 Query: 72 EKKSKNSIQWKGVGPGCNTREIADKLIE---LKAEIEELQQREQELDQHK 118 + +KN W G T +L E + ++ LQQ+E +L +K Sbjct: 200 SRVAKNQYGWHGRHSLPKTLRNLQRLGEEQKYEEQMAYLQQKELDLIDYK 249 Score = 42.0 bits (97), Expect = 0.001 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 22/121 (18%) Query: 10 PPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQK------------RR 57 P SR +KSL +++ KFV L +K ++ L +AA L + RR Sbjct: 275 PSSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDAPDHSKFKTKVRR 334 Query: 58 IYDITNVLEGIGLI-------EKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQR 110 +YDI NVL + LI E+ K + +W +GP + ++L+++ A + +R Sbjct: 335 LYDIANVLTSLALIKKVHVTEERGRKPAFKW--IGP-VDFSSSDEELVDVSASVLPELKR 391 Query: 111 E 111 E Sbjct: 392 E 392 >gi|55953110 retinoblastoma protein-binding zinc finger protein isoform c [Homo sapiens] Length = 1481 Score = 55.5 bits (132), Expect = 9e-08 Identities = 51/160 (31%), Positives = 70/160 (43%), Gaps = 41/160 (25%) Query: 187 SGPIEVLLVNKEAWSSPP------VAVPVPP--PEDLLQSPSAVSTPPPLPKPALAQSQE 238 SG + LL+ + S PP VA P PP P L +PS+ ++P P P P S Sbjct: 757 SGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPL---SNA 813 Query: 239 ASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRP 298 ++ P L+PT P + + P + + PG PT Sbjct: 814 TAQSPLPILSPTVSPSPSPIP----PVEPLMSAASPGP--------------PT------ 849 Query: 299 LQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPI 338 L SSSSSSSSSSS S+S+SSSS P P ++ + Sbjct: 850 ------LSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSV 883 Score = 35.0 bits (79), Expect = 0.12 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 4/135 (2%) Query: 209 VPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEI 268 V P LQ+PS S P P L + +S P P + A P + + PA Sbjct: 743 VCPSSPALQTPSLSSGQLP---PLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSS 799 Query: 269 TVSGGPGTDSKDSGELSS-LPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSS 327 + S P + S LP+ T+ P + S++S + S+S+SSSSS Sbjct: 800 SASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSS 859 Query: 328 GPNPSTSFEPIKADP 342 + S+S P Sbjct: 860 SSSFSSSSSSSSPSP 874 >gi|20336260 retinoblastoma protein-binding zinc finger protein isoform b [Homo sapiens] Length = 1682 Score = 55.5 bits (132), Expect = 9e-08 Identities = 51/160 (31%), Positives = 70/160 (43%), Gaps = 41/160 (25%) Query: 187 SGPIEVLLVNKEAWSSPP------VAVPVPP--PEDLLQSPSAVSTPPPLPKPALAQSQE 238 SG + LL+ + S PP VA P PP P L +PS+ ++P P P P S Sbjct: 958 SGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPL---SNA 1014 Query: 239 ASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRP 298 ++ P L+PT P + + P + + PG PT Sbjct: 1015 TAQSPLPILSPTVSPSPSPIP----PVEPLMSAASPGP--------------PT------ 1050 Query: 299 LQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPI 338 L SSSSSSSSSSS S+S+SSSS P P ++ + Sbjct: 1051 ------LSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSV 1084 Score = 35.0 bits (79), Expect = 0.12 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 4/135 (2%) Query: 209 VPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEI 268 V P LQ+PS S P P L + +S P P + A P + + PA Sbjct: 944 VCPSSPALQTPSLSSGQLP---PLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSS 1000 Query: 269 TVSGGPGTDSKDSGELSS-LPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSS 327 + S P + S LP+ T+ P + S++S + S+S+SSSSS Sbjct: 1001 SASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSS 1060 Query: 328 GPNPSTSFEPIKADP 342 + S+S P Sbjct: 1061 SSSFSSSSSSSSPSP 1075 >gi|20336258 retinoblastoma protein-binding zinc finger protein isoform a [Homo sapiens] Length = 1718 Score = 55.5 bits (132), Expect = 9e-08 Identities = 51/160 (31%), Positives = 70/160 (43%), Gaps = 41/160 (25%) Query: 187 SGPIEVLLVNKEAWSSPP------VAVPVPP--PEDLLQSPSAVSTPPPLPKPALAQSQE 238 SG + LL+ + S PP VA P PP P L +PS+ ++P P P P S Sbjct: 958 SGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPL---SNA 1014 Query: 239 ASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRP 298 ++ P L+PT P + + P + + PG PT Sbjct: 1015 TAQSPLPILSPTVSPSPSPIP----PVEPLMSAASPGP--------------PT------ 1050 Query: 299 LQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPI 338 L SSSSSSSSSSS S+S+SSSS P P ++ + Sbjct: 1051 ------LSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSV 1084 Score = 35.0 bits (79), Expect = 0.12 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 4/135 (2%) Query: 209 VPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEI 268 V P LQ+PS S P P L + +S P P + A P + + PA Sbjct: 944 VCPSSPALQTPSLSSGQLP---PLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSS 1000 Query: 269 TVSGGPGTDSKDSGELSS-LPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSS 327 + S P + S LP+ T+ P + S++S + S+S+SSSSS Sbjct: 1001 SASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSS 1060 Query: 328 GPNPSTSFEPIKADP 342 + S+S P Sbjct: 1061 SSSFSSSSSSSSPSP 1075 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 55.5 bits (132), Expect = 9e-08 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 17/202 (8%) Query: 203 PPVAVPVPPPEDLLQSPSAVSTPPPLPK------PALAQSQEASRPNSPQLTPTAVPGSA 256 P V PP Q PSA++ P + + + S +S +S + ++ S+ Sbjct: 2502 PHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSS 2561 Query: 257 EVQGMAGPAA-EITVSGGPG-TDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSS 314 + +G + P E+ + P T + P PT + SS+ SSSSSSSS Sbjct: 2562 DSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSS 2621 Query: 315 SSSSSNSNSSSSSGPNPSTSFEPIKADPT----GVLELPKELSEIFDPTRECMSSELLEE 370 SSSSS+S+SSSSS + S+S + P+ G LPK S P E S + Sbjct: 2622 SSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKP 2681 Query: 371 LMS-----SEVFAPLLRLSPPP 387 + S S ++P+ R P P Sbjct: 2682 IDSLRDSRSLSYSPVERRRPSP 2703 Score = 37.0 bits (84), Expect = 0.033 Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Query: 161 SGTSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLLVNKEAWSSPPV-AVPVPPPEDLLQSP 219 S T E P P L ++ + P+ VN + +SP P PE L QS Sbjct: 357 SSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSS 416 Query: 220 SAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGS 255 S+ S+PP P+P +S P SP+ P PGS Sbjct: 417 SSESSPPS-PQPTKVSRHASSSPESPK--PAPAPGS 449 Score = 32.7 bits (73), Expect = 0.62 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 12/136 (8%) Query: 210 PPPEDLLQSPS-----AVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGP 264 P +D+ ++PS S+P P P + + S P+SP+L + E G Sbjct: 1464 PGMKDIPRTPSRGRSECDSSPEPKALPQTPRPRSRS-PSSPELNNKCLTPQRERSGSESS 1522 Query: 265 AAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSS------SSSSSSS 318 + TV+ P SG L + P+ +S + DS + + S S SS Sbjct: 1523 VDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSS 1582 Query: 319 SNSNSSSSSGPNPSTS 334 +S S P S S Sbjct: 1583 PEVDSKSRLSPRRSRS 1598 Score = 29.3 bits (64), Expect = 6.8 Identities = 36/162 (22%), Positives = 60/162 (37%), Gaps = 12/162 (7%) Query: 181 IHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEAS 240 ++L P + ++ +PP A P Q+P++ + P A A A Sbjct: 2295 VNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAG 2354 Query: 241 RPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGP-GTDSKDSGELSSLPLGPTTLDTRPL 299 + L P ++ + ++G A +T P + SG S P LD Sbjct: 2355 SRTAAALAPASLTSARMAPALSG--ANLTSPRVPLSAYERVSGRTS-----PPLLD---- 2403 Query: 300 QSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKAD 341 ++ + S+ S S +S + SS G PS S P D Sbjct: 2404 RARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQD 2445 >gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] Length = 2968 Score = 55.1 bits (131), Expect = 1e-07 Identities = 47/145 (32%), Positives = 61/145 (42%), Gaps = 11/145 (7%) Query: 201 SSPPVAVPVPPPEDLLQSPSAVST-----PPPLPKPALAQSQEASRPNSPQLTPTAVPGS 255 S P P DL Q P T P P A A+ A S + + S Sbjct: 2511 SEPKAPWPKATDGDLAQEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSSSGSSSS 2570 Query: 256 AEVQGMAGPAAE------ITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSS 309 + +G E GG GT ++ SS P + + SS+ SSS Sbjct: 2571 SSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSS 2630 Query: 310 SSSSSSSSSSNSNSSSSSGPNPSTS 334 SSSSSSSSSS+S+SSSSS + S+S Sbjct: 2631 SSSSSSSSSSSSSSSSSSSSSSSSS 2655 Score = 43.5 bits (101), Expect = 4e-04 Identities = 31/90 (34%), Positives = 44/90 (48%) Query: 255 SAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSS 314 SA A PA+ + S + S S SS ++ + SS+ SSSSSSSS Sbjct: 2603 SAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2662 Query: 315 SSSSSNSNSSSSSGPNPSTSFEPIKADPTG 344 SSSSS+S+S++ + S+ E A G Sbjct: 2663 SSSSSSSSSTTDEDSSCSSDDEAAPAPTAG 2692 Score = 38.1 bits (87), Expect = 0.015 Identities = 28/100 (28%), Positives = 45/100 (45%) Query: 255 SAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSS 314 S+ A ++ + S + S S SS ++ + SS+ SSSSSSSS Sbjct: 2606 SSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2665 Query: 315 SSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSE 354 SSSSS++ SS + + A P+ LP + ++ Sbjct: 2666 SSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATK 2705 Score = 30.8 bits (68), Expect = 2.3 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Query: 251 AVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSS 310 A P S+ + ++ + S + S S SS ++ + SS+ SSSS Sbjct: 2610 ASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2669 Query: 311 SSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPT 343 SS++ SS S S + P P+ A PT Sbjct: 2670 SSTTDEDSSCS-SDDEAAPAPTAGPSAQAALPT 2701 >gi|38505226 E2F family member 8 [Homo sapiens] Length = 867 Score = 53.1 bits (126), Expect = 4e-07 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Query: 15 PSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVR---QKRRIYDITNVLEGIGLI 71 PSR EKSLGLL KF++ + ++ + D +A ++RRIYDI NVLE + ++ Sbjct: 111 PSRKEKSLGLLCHKFLARYPNYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESLHMV 170 Query: 72 EKKSKNSIQWKG 83 + +KN W G Sbjct: 171 SRLAKNRYTWHG 182 Score = 41.2 bits (95), Expect = 0.002 Identities = 76/342 (22%), Positives = 126/342 (36%), Gaps = 44/342 (12%) Query: 16 SRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQK-------------RRIYDIT 62 SR +KSL +++ KFV L + ++ L++AA L RR+YDI Sbjct: 260 SRKDKSLRVMSQKFVMLFLVSTPQIVSLEVAAKILIGEDHVEDLDKSKFKTKIRRLYDIA 319 Query: 63 NVLEGIGLI-------EKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELD 115 NVL + LI E+ K + +W G NT + +I E+++ +E Sbjct: 320 NVLSSLDLIKKVHVTEERGRKPAFKWTGPEISPNTSG-SSPVIHFTPSDLEVRRSSKENC 378 Query: 116 QHKVWVQQSIRNVTEDVQNSCLAYVTHEDICRC-FAGDTLLAIRAPSGTSLEVPIPE--- 171 ++ + N T L D + A + + + P P Sbjct: 379 AKNLFSTRGKPNFTRHPSLIKLVKSIESDRRKINSAPSSPIKTNKAESSQNSAPFPSKMA 438 Query: 172 GLNGQKKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKP 231 L K Q+ +S +V + + PVA P+ PP + +A S PL Sbjct: 439 QLAAICKMQLEEQSSESRQKVKVQLARSGPCKPVA-PLDPPVNAEMELTAPSLIQPLGMV 497 Query: 232 ALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGP 291 L S +S P + P A G + + A +V+ G L P Sbjct: 498 PLIPSPLSSA--VPLILPQAPSGPSYAIYLQPTQAHQSVTPPQG-------------LSP 542 Query: 292 TTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPST 333 T T SS S S+ +++ ++N S +S+ P + Sbjct: 543 TVCTT---HSSKATGSKDSTDATTEKAANDTSKASASTRPGS 581 >gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 1124 Score = 51.6 bits (122), Expect = 1e-06 Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 11/152 (7%) Query: 201 SSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQ---SQEASRPNSPQLTPTAVPGSAE 257 ++PP+ VP PP SPSA TPPP P LA S P SP ++P+A P Sbjct: 700 AAPPLQVPPSPPASPPMSPSA--TPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRV 757 Query: 258 VQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSS 317 +A P ++ S P S P P L T PLQ+ +S + S Sbjct: 758 PPLLAAPPLQVPPS--PPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSP 815 Query: 318 SSNSNSSSSSGPNPSTSFEPIKADPTGVLELP 349 S++ S + P P P+ A P +L++P Sbjct: 816 SASLPMSPLATPPPQA--PPVLAAP--LLQVP 843 Score = 47.4 bits (111), Expect = 2e-05 Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 11/146 (7%) Query: 202 SPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGM 261 +PP + PPPE +PS+++TPPP PALA P SP L+P A P + Sbjct: 571 APPSPLTTPPPE----TPSSIATPPPQAPPALASPPLQGLP-SPPLSPLATPPPQAPPXL 625 Query: 262 AGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNS 321 A P + S P S + P P L LQ+ S + S ++ Sbjct: 626 ALPPLQAPPS--PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP 683 Query: 322 NSSSSSGP----NPSTSFEPIKADPT 343 S S+ P PS + P++ P+ Sbjct: 684 PVSPSATPPSQAPPSLAAPPLQVPPS 709 Score = 47.0 bits (110), Expect = 3e-05 Identities = 54/191 (28%), Positives = 74/191 (38%), Gaps = 19/191 (9%) Query: 202 SPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQ---SQEASRPNSPQLTPTAVPGSAEV 258 SPPV P PP SPSA TPP P+LA S P SP ++P+A P Sbjct: 670 SPPVQAPFSPPASPPVSPSA--TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 727 Query: 259 QGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSS 318 +A P ++ S P S + P P L PLQ S +S Sbjct: 728 PPLAAPPLQVPPS--PPASPPMSPSATPPPRVPPLLAAPPLQ-------VPPSPPASLPM 778 Query: 319 SNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELLEELMSSE--V 376 S P P+ + P++A P+ P + F P+ S L + + Sbjct: 779 SPLAKPPPQAP-PALATPPLQALPSPPASFPGQAP--FSPSASLPMSPLATPPPQAPPVL 835 Query: 377 FAPLLRLSPPP 387 APLL++ P P Sbjct: 836 AAPLLQVPPSP 846 Score = 45.1 bits (105), Expect = 1e-04 Identities = 49/167 (29%), Positives = 64/167 (38%), Gaps = 32/167 (19%) Query: 201 SSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQ-------------------SQEASR 241 ++PP+ VP PP L SP A PPP PALA S AS Sbjct: 762 AAPPLQVPPSPPASLPMSPLA--KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASL 819 Query: 242 PNSPQLTP----TAVPGSAEVQGMAGPAAEITVSG-----GPGTDSKDSGELSSLPL--G 290 P SP TP V + +Q P A T+ PG D+ SG +L L G Sbjct: 820 PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG 879 Query: 291 PTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEP 337 P +R S+ + SSS++S+ SGP + P Sbjct: 880 PPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASP 926 Score = 44.7 bits (104), Expect = 2e-04 Identities = 71/255 (27%), Positives = 100/255 (39%), Gaps = 32/255 (12%) Query: 158 RAPSGTSLEVPIPEGLNGQKKYQIH--LKSVSGPIEVLLVNKEAWSSPP--VAVPVPPPE 213 RAP+ S P P+GL + Q+ K + + L + A SP A PVPPP+ Sbjct: 264 RAPAHPSQ--PKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPD 321 Query: 214 D--------LLQSPSAVSTPPPL--PKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAG 263 + L SP ++TP PL P P+ S + + P+ P P+ P S M Sbjct: 322 NAATPLPATLPPSP-PLATPLPLAPPSPSAPPSLQ-TLPSPPATPPSQAPPSMTTPPMQA 379 Query: 264 PAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSS--SSSSNS 321 P + T+ P S SL P+ L LQ++ L S + ++ S + S Sbjct: 380 PPSLQTI---PPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQ 436 Query: 322 NSSSSSGPNPSTSFEPIKADPTGVLELPKE--LSEIFDPTRECMSSEL-------LEELM 372 +S + P+ S P L LP L P +SS L L L Sbjct: 437 TQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLA 496 Query: 373 SSEVFAPLLRLSPPP 387 S APL L PP Sbjct: 497 SHSPQAPLSSLIMPP 511 Score = 34.7 bits (78), Expect = 0.16 Identities = 46/169 (27%), Positives = 63/169 (37%), Gaps = 29/169 (17%) Query: 203 PPVAVPV--PPPEDLLQSP--SAVSTPPPLPKPALA-------QSQEASRPNSPQLTPT- 250 PP A P PP L SP S ++TPPP P LA S AS P SP TP+ Sbjct: 591 PPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSP 650 Query: 251 ---------------AVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPL--GPTT 293 + P S VQ P A VS S+ L++ PL P+ Sbjct: 651 QAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 710 Query: 294 LDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADP 342 + P+ SA + ++ S +S P ++ P + P Sbjct: 711 PASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPP 759 Score = 32.7 bits (73), Expect = 0.62 Identities = 49/208 (23%), Positives = 75/208 (36%), Gaps = 30/208 (14%) Query: 204 PVAVPVPPPEDLLQSPSA----------------VSTPPPLPKPALA---QSQEASRPNS 244 P ++ PPP Q+P A ++TPPP P LA S P S Sbjct: 584 PSSIATPPP----QAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPAS 639 Query: 245 PQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTD-SKDSGELSSLPLGPTTLDTRPLQSSA 303 P L+P A P +A + S P +S P+ P+ T P Q+ Sbjct: 640 PPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSA--TPPSQAPP 697 Query: 304 LLDSSSSSSSSSSSSSNSNSSSSSGP---NPSTSFEPIKADPTGVLELPKELSEIFDP-T 359 L + S +S S S++ P P + P++ P+ P S P Sbjct: 698 SLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRV 757 Query: 360 RECMSSELLEELMSSEVFAPLLRLSPPP 387 +++ L+ S P+ L+ PP Sbjct: 758 PPLLAAPPLQVPPSPPASLPMSPLAKPP 785 Score = 31.6 bits (70), Expect = 1.4 Identities = 34/112 (30%), Positives = 40/112 (35%), Gaps = 16/112 (14%) Query: 202 SPPVAVPVPPPEDL-------LQSPSAVSTPPPLPKPALAQSQEASRPNSPQLT-PTAVP 253 +PP ++ PP E+L LQ+ SA T P L P P SP T P P Sbjct: 525 TPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETP 584 Query: 254 GSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSL----PLGPTTLDTRPLQS 301 S P A P S LS L P P L PLQ+ Sbjct: 585 SSIATPPPQAPPA----LASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQA 632 Score = 29.3 bits (64), Expect = 6.8 Identities = 45/189 (23%), Positives = 67/189 (35%), Gaps = 33/189 (17%) Query: 203 PPVAVPVPPPEDLLQSPSAVSTPPPLPK-PALAQS--QEASRP-NSPQLTPTAVPGSAEV 258 PP+ LQ+P A T PPL P+LA Q AS P +P L P + Sbjct: 510 PPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPL 569 Query: 259 QGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSS 318 Q P + P P+++ T P Q+ L S S Sbjct: 570 QAPPSPLT------------------TPPPETPSSIATPPPQAPPALASPPLQGLPSPPL 611 Query: 319 SNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELLEELMSSEVFA 378 S + P P + P++A P+ P LS + P+ + ++ + L + Sbjct: 612 SPLATPPPQAP-PXLALPPLQAPPSPPASPP--LSPLATPSPQAPNALAVHLLQAP---- 664 Query: 379 PLLRLSPPP 387 SPPP Sbjct: 665 ----FSPPP 669 >gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] Length = 753 Score = 50.1 bits (118), Expect = 4e-06 Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 16/141 (11%) Query: 204 PVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAG 263 P A P P +P A + PP P ++P P + P+ G G + Sbjct: 355 PKASPAPSHNSGTPAPYAQAVAPPAPS-----GPSTTQPRPPSVQPSGGGGGGSGGGGSS 409 Query: 264 PAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNS 323 ++ + GG G + G T+ + S A + SSS +++SS + Sbjct: 410 SSSNSSAGGGAGKQN-----------GATSYSSVVADSPAEVALSSSGGNNASSQALGPP 458 Query: 324 SSSSGPNPSTSFEPIKADPTG 344 S P PSTS EP A PTG Sbjct: 459 SGPHNPPPSTSKEPSAAAPTG 479 Score = 34.3 bits (77), Expect = 0.21 Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 19/177 (10%) Query: 234 AQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTT 293 A SQ P+ P P P +++ A P V+ G G +S L LP+ P + Sbjct: 450 ASSQALGPPSGPHNPP---PSTSKEPSAAAPTGAGGVAPGSGNNSGGPSLLVPLPVNPPS 506 Query: 294 LDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELS 353 T + D+ ++ + + S + P P +S + + E S Sbjct: 507 SPT-----PSFSDAKAAGALLNGPPQFSTAPEIKAPEPLSSLK-------SMAERAAISS 554 Query: 354 EIFDPTRECMSSELLEELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFDVPV 410 I DP +E +++ S AP PP + N+ S GVC L VP+ Sbjct: 555 GIEDPVPTLHLTE--RDIILSSTSAPPASAQPPLQLSE--VNIPLSLGVCPLGPVPL 607 >gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] Length = 1013 Score = 49.7 bits (117), Expect = 5e-06 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 287 LPLGPTT--LDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTG 344 LPL P T P ++A SSSSSSSSSSSSS+++SSSSS + P + P Sbjct: 65 LPLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPR 124 Query: 345 VLELP 349 VLELP Sbjct: 125 VLELP 129 Score = 30.8 bits (68), Expect = 2.3 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 208 PVPPPEDLLQ--SPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPA 265 P PPPE SP+ +P PA+A + E ++ +P+ T + V G+ G Sbjct: 523 PPPPPEPAATPTSPATAVSPATAAGPAMATTTEEAKGRNPRAGRTLTYTAKPVGGIGGGG 582 Query: 266 AEITVSG-GP 274 T +G GP Sbjct: 583 GPPTGAGRGP 592 >gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] Length = 1013 Score = 49.7 bits (117), Expect = 5e-06 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 287 LPLGPTT--LDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTG 344 LPL P T P ++A SSSSSSSSSSSSS+++SSSSS + P + P Sbjct: 65 LPLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPR 124 Query: 345 VLELP 349 VLELP Sbjct: 125 VLELP 129 Score = 30.8 bits (68), Expect = 2.3 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 208 PVPPPEDLLQ--SPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPA 265 P PPPE SP+ +P PA+A + E ++ +P+ T + V G+ G Sbjct: 523 PPPPPEPAATPTSPATAVSPATAAGPAMATTTEEAKGRNPRAGRTLTYTAKPVGGIGGGG 582 Query: 266 AEITVSG-GP 274 T +G GP Sbjct: 583 GPPTGAGRGP 592 >gi|146219843 Snf2-related CBP activator protein [Homo sapiens] Length = 3230 Score = 48.9 bits (115), Expect = 8e-06 Identities = 62/238 (26%), Positives = 92/238 (38%), Gaps = 48/238 (20%) Query: 186 VSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSP 245 +S P + ++ SPP +PP +P TPPP P AQ+ + P+SP Sbjct: 2468 ISAPNPITILPVHILPSPPPPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVT-PSSP 2526 Query: 246 QLT-PTAVPGSAEVQGM---AGPAAEITVSGGPGTDSKD-----SGELSSLPLG------ 290 L P +VP SA V + P AE+ +S + S E SSL L Sbjct: 2527 LLLGPPSVPISASVTNLPLGLRPEAELCAQALASPESLELASVASSETSSLSLVPPKDLL 2586 Query: 291 PTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPN----------PSTSFEPIKA 340 P ++ P+ L + S+ S + + S N P+ P P+ Sbjct: 2587 PVAVEILPVSEKNLSLTPSAPSLTLEAGSIPNGQEQEAPDSAEGTTLTVLPEGEELPLCV 2646 Query: 341 DPTGVLELP-------------------KELSEIFDPTRECMSSELLEELMSSEVFAP 379 + LELP +EL+E PT S E +EL+++EV AP Sbjct: 2647 SESNGLELPPSAASDEPLQEPLEADRTSEELTEAKTPT---SSPEKPQELVTAEVAAP 2701 Score = 41.6 bits (96), Expect = 0.001 Identities = 71/273 (26%), Positives = 110/273 (40%), Gaps = 23/273 (8%) Query: 101 KAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDICRCFA---GDTLLAI 157 K + Q R+ + Q + + + V+ Q+ ++ H + + A G T +++ Sbjct: 1215 KLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLISQPAHVALIQAVAPTPGPTPVSV 1274 Query: 158 RAPSGTSLEVPIPEGLN-GQKKYQIHLKSVSGPIEVLLVNKEAWSS-----PPVA-VPVP 210 PS T P P GL+ Q+ V+ V +V ++A PP+A P P Sbjct: 1275 -LPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDGLTPVPPLAPAPRP 1333 Query: 211 PPEDL--LQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEI 268 P L + +P TP LP P L ++ +P TPT V ++ P Sbjct: 1334 PSSGLPAVLNPRPTLTPGRLPTPTLGTAR------APMPTPTLVRPLLKLVHSPSPEVSA 1387 Query: 269 TVSG-GPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSS 327 + G P T S SSLP GP + SS L SS+ S SSS S ++ Sbjct: 1388 SAPGAAPLTISSPLHVPSSLP-GPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTT 1446 Query: 328 GPNPSTS--FEPIKADPTGVLELPKELSEIFDP 358 P P+++ PI A T P L+ + P Sbjct: 1447 LPAPASAPLTIPISAPLTVSASGPALLTSVTPP 1479 Score = 39.3 bits (90), Expect = 0.007 Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 20/175 (11%) Query: 192 VLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLP-------KPALAQSQEASRPNS 244 V++VN PV V PP +L P+ P LP PA ASRP Sbjct: 1009 VVVVNNPRAPLGPVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPG 1068 Query: 245 PQLTPTAVPGSAEV-QGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQ-SS 302 P L P P S + Q + P ++ + P T + L P P L P SS Sbjct: 1069 PVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTL---SLKPTPPAPVRLSPAPPPGSS 1125 Query: 303 ALLD--------SSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELP 349 +LL + ++++++S++ + +++++ P P+ + + + P LP Sbjct: 1126 SLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLP 1180 Score = 38.1 bits (87), Expect = 0.015 Identities = 42/175 (24%), Positives = 64/175 (36%), Gaps = 7/175 (4%) Query: 163 TSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAV 222 ++L P P N L S + L ++P A+ P P L +P V Sbjct: 1553 SALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPL-APLPV 1611 Query: 223 STPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSG 282 P P P LA SQ P + P++ PG++ PA ++ + Sbjct: 1612 LAPSPGAAPVLASSQTPV----PVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAP 1667 Query: 283 ELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEP 337 S LP P + T L + AL + SS S + S + + P + S P Sbjct: 1668 VPSPLP-SPASTQTLAL-APALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTP 1720 Score = 38.1 bits (87), Expect = 0.015 Identities = 37/151 (24%), Positives = 57/151 (37%), Gaps = 6/151 (3%) Query: 201 SSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQG 260 +S VPV P + A ++P P P P LA S + +P +P P S + Sbjct: 1623 ASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLA 1682 Query: 261 MAGPAAEITVSGGPGTDSKDSGELSSLPLGP---TTLDTRPLQSSALLDSSSSSSSSSSS 317 +A PA T+ G + + G + P GP TL P S + + S + Sbjct: 1683 LA-PALAPTLGGSSPSQTLSLG--TGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPP 1739 Query: 318 SSNSNSSSSSGPNPSTSFEPIKADPTGVLEL 348 + + S + P P+ P L L Sbjct: 1740 LGPTQTLSLAPAPPLAPASPVGPAPAHTLTL 1770 Score = 30.4 bits (67), Expect = 3.1 Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 21/130 (16%) Query: 204 PVAVPVPPPEDLLQSPSAVSTPPPLPKPA--LAQSQEASRPNSPQLTPTAVPGSAEVQGM 261 P PV P L SP S P P P A LA + AS+ + L P A P +A + Sbjct: 1543 PACSPVLVPASALASPFP-SAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPS 1601 Query: 262 AGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNS 321 P L+ LP+ + P+ +S+ + SS+ +S + Sbjct: 1602 PAP------------------PLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLA 1643 Query: 322 NSSSSSGPNP 331 ++S P P Sbjct: 1644 SASPVPAPTP 1653 Score = 28.9 bits (63), Expect = 8.9 Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 31/156 (19%) Query: 211 PPEDLLQSPSAVSTPPPL------PKPALAQSQEASRPNSPQLTPTAVPGSAEVQ----- 259 P + L +P++ P P P P L +Q S +P L P + G A Sbjct: 1712 PTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLA 1771 Query: 260 ------GMAGPAAEITVSGGPG-TDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSS- 311 + PA+ T++ P + +L L P + + Q+S+L+ S+S + Sbjct: 1772 PASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLVVSASGAA 1831 Query: 312 ------------SSSSSSSSNSNSSSSSGPNPSTSF 335 S + S S P+ +TSF Sbjct: 1832 PLPVTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSF 1867 >gi|193083172 nuclear assembly factor 1 homolog isoform b [Homo sapiens] Length = 389 Score = 47.8 bits (112), Expect = 2e-05 Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 16/172 (9%) Query: 218 SPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPG-- 275 +PS S P P +P L QS E S P++ Q G +Q + A T + P Sbjct: 29 APSPGSAPVPGTQPPL-QSFEGS-PDAGQTVEVKPAGEQPLQPVLNAVAAGTPAPQPQPP 86 Query: 276 TDSKDSGELSSLP------LGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGP 329 +S G+ + P P +L+T S + S + S SSSSSS+S+SSSSS Sbjct: 87 AESPACGDCVTSPGAAEPARAPDSLETSDSDSDS---DSETDSDSSSSSSSSSSSSSSSS 143 Query: 330 NPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELLEELMSSEVFAPLL 381 + S P+ +D L++ KE T++ + LL EL S E +L Sbjct: 144 SSCISLPPVLSDGDDDLQIEKENKNFPLKTKDEL---LLNELPSVEELTIIL 192 >gi|193083157 nuclear assembly factor 1 homolog isoform a [Homo sapiens] Length = 494 Score = 47.8 bits (112), Expect = 2e-05 Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 16/172 (9%) Query: 218 SPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPG-- 275 +PS S P P +P L QS E S P++ Q G +Q + A T + P Sbjct: 29 APSPGSAPVPGTQPPL-QSFEGS-PDAGQTVEVKPAGEQPLQPVLNAVAAGTPAPQPQPP 86 Query: 276 TDSKDSGELSSLP------LGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGP 329 +S G+ + P P +L+T S + S + S SSSSSS+S+SSSSS Sbjct: 87 AESPACGDCVTSPGAAEPARAPDSLETSDSDSDS---DSETDSDSSSSSSSSSSSSSSSS 143 Query: 330 NPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELLEELMSSEVFAPLL 381 + S P+ +D L++ KE T++ + LL EL S E +L Sbjct: 144 SSCISLPPVLSDGDDDLQIEKENKNFPLKTKDEL---LLNELPSVEELTIIL 192 >gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] Length = 558 Score = 46.6 bits (109), Expect = 4e-05 Identities = 48/171 (28%), Positives = 67/171 (39%), Gaps = 27/171 (15%) Query: 203 PPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPN------SPQLTPTAVPGSA 256 PP++ + SA S+P P P + RP + T T+ G Sbjct: 18 PPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGG 77 Query: 257 EVQGMAGPAAEITVSGGPG--------------TDSKDSGELSSLPLGPTTLDTRPLQSS 302 G G GG G + G + G + P+ +S Sbjct: 78 GGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINAS 137 Query: 303 ALLDSSSSSSSSSSSSSNSNSSSSS---GPNPSTSFEPIKADPTGVLELPK 350 SSSSSSSSSSSSS+S+SSSSS GP P +P+ + P+ V P+ Sbjct: 138 TG-SSSSSSSSSSSSSSSSSSSSSSSSCGPLPG---KPVYSTPSPVENTPQ 184 >gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] Length = 706 Score = 46.6 bits (109), Expect = 4e-05 Identities = 48/171 (28%), Positives = 67/171 (39%), Gaps = 27/171 (15%) Query: 203 PPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPN------SPQLTPTAVPGSA 256 PP++ + SA S+P P P + RP + T T+ G Sbjct: 18 PPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGG 77 Query: 257 EVQGMAGPAAEITVSGGPG--------------TDSKDSGELSSLPLGPTTLDTRPLQSS 302 G G GG G + G + G + P+ +S Sbjct: 78 GGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINAS 137 Query: 303 ALLDSSSSSSSSSSSSSNSNSSSSS---GPNPSTSFEPIKADPTGVLELPK 350 SSSSSSSSSSSSS+S+SSSSS GP P +P+ + P+ V P+ Sbjct: 138 TG-SSSSSSSSSSSSSSSSSSSSSSSSCGPLPG---KPVYSTPSPVENTPQ 184 >gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] Length = 504 Score = 46.6 bits (109), Expect = 4e-05 Identities = 48/171 (28%), Positives = 67/171 (39%), Gaps = 27/171 (15%) Query: 203 PPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPN------SPQLTPTAVPGSA 256 PP++ + SA S+P P P + RP + T T+ G Sbjct: 18 PPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGG 77 Query: 257 EVQGMAGPAAEITVSGGPG--------------TDSKDSGELSSLPLGPTTLDTRPLQSS 302 G G GG G + G + G + P+ +S Sbjct: 78 GGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINAS 137 Query: 303 ALLDSSSSSSSSSSSSSNSNSSSSS---GPNPSTSFEPIKADPTGVLELPK 350 SSSSSSSSSSSSS+S+SSSSS GP P +P+ + P+ V P+ Sbjct: 138 TG-SSSSSSSSSSSSSSSSSSSSSSSSCGPLPG---KPVYSTPSPVENTPQ 184 >gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 [Homo sapiens] Length = 559 Score = 46.6 bits (109), Expect = 4e-05 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 17/161 (10%) Query: 197 KEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEAS----RPNSPQLTPTAV 252 K A+ P +A+ E SP PPP P P + + A+ +P++ + ++ Sbjct: 248 KAAFKEPKMALKETKLEST--SPKGGPPPPPPPPPRASSKRPATADSPKPSAKKQKKSSS 305 Query: 253 PGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSS 312 GS G + T S +D K + + SS ++ P ++ L+ S+S Sbjct: 306 KGSRSAPG----TSPRTSSSSSFSDKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNS 361 Query: 313 -------SSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVL 346 S S+ SS SNSSSSS + + FEP + G L Sbjct: 362 EDEASFKSESAQSSPSNSSSSSDSSSDSDFEPSQNHSQGPL 402 Score = 42.4 bits (98), Expect = 8e-04 Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 22/161 (13%) Query: 202 SPPVAVPVPPPEDLLQSPSAVST------PPPLPKPALAQSQEASRPNSPQLTPTAVPGS 255 +PP P+ L+ ST PPP P P A S+ + +SP+ + S Sbjct: 244 APPPKAAFKEPKMALKETKLESTSPKGGPPPPPPPPPRASSKRPATADSPKPSAKKQKKS 303 Query: 256 AEVQGMAGPAAEI-TVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLD-------- 306 + + P T S +D K + + SS ++ P ++ L+ Sbjct: 304 SSKGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSED 363 Query: 307 -------SSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKA 340 S+ SS S+SSSSS+S+S S P+ + S P+++ Sbjct: 364 EASFKSESAQSSPSNSSSSSDSSSDSDFEPSQNHSQGPLRS 404 >gi|116284392 mucin 2 precursor [Homo sapiens] Length = 5179 Score = 46.6 bits (109), Expect = 4e-05 Identities = 39/172 (22%), Positives = 66/172 (38%), Gaps = 18/172 (10%) Query: 202 SPPVAVPVPPPEDLLQSP---------SAVSTPPPL--PKPALAQSQE---ASRPNSPQL 247 SPP P PPP P + +TPPP P P + + + P+ P Sbjct: 1400 SPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPIS 1459 Query: 248 TPTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDS 307 T T P + + T + P T + + ++ P PTT P S+ L Sbjct: 1460 TTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPP 1519 Query: 308 SSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPT 359 +++ S +++++ +++ P +T P PT LP + PT Sbjct: 1520 TTTPSPPTTTTTTPPPTTTPSPPTTTPITP----PTSTTTLPPTTTPSPPPT 1567 Score = 45.8 bits (107), Expect = 7e-05 Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 27/142 (19%) Query: 202 SPPVAVPVPPPEDLLQ---------SPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAV 252 SPP P+ PP P+ +TPPP P S + SP +T T Sbjct: 1619 SPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP----SPPTTTTPSPPITTTTT 1674 Query: 253 PGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSS 312 P P++ IT + P T + + ++ P P T T P SS+++ Sbjct: 1675 PPPTTT-----PSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTP---------SSTTT 1720 Query: 313 SSSSSSSNSNSSSSSGPNPSTS 334 S ++ + S ++ P+P T+ Sbjct: 1721 PSPPPTTMTTPSPTTTPSPPTT 1742 Score = 44.7 bits (104), Expect = 2e-04 Identities = 42/189 (22%), Positives = 73/189 (38%), Gaps = 17/189 (8%) Query: 201 SSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSA--EV 258 S P PPP +PS +T P P + + P+ P T T P + Sbjct: 1603 SPPTTTTTTPPP---TTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSP 1659 Query: 259 QGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSS 318 P+ IT + P + S +++ P PTT T P +++ SS +++ Sbjct: 1660 PTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTP-------SPTTTPSSPITTT 1712 Query: 319 SNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTREC--MSSELLEELMSSEV 376 + +S+++ P P+T P PT P PT +++ L ++ Sbjct: 1713 TTPSSTTTPSPPPTTMTTP---SPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPT 1769 Query: 377 FAPLLRLSP 385 F+P +P Sbjct: 1770 FSPFSTTTP 1778 Score = 42.7 bits (99), Expect = 6e-04 Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 6/144 (4%) Query: 203 PPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRP--NSPQLTPTAVPGSAEVQG 260 PP P PP + P++ +T PP P+ + + P +P T P + Sbjct: 1534 PPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITT 1593 Query: 261 MAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLD-TRPLQSSALLDSSSSSSSSSSSSS 319 P T + P T + + ++ P PTT T P ++ L +++ S +++++ Sbjct: 1594 TTPPP---TTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTT 1650 Query: 320 NSNSSSSSGPNPSTSFEPIKADPT 343 +++ S P +T PI T Sbjct: 1651 PPPTTTPSPPTTTTPSPPITTTTT 1674 Score = 42.0 bits (97), Expect = 0.001 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 12/146 (8%) Query: 201 SSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLT-----PTAVPGS 255 ++PP PP +P +TP P P S + P+ P T PT P Sbjct: 1446 TTPPPTTTPSPPISTTTTPPPTTTPSP---PTTTPSPPTTTPSPPTTTTTTPPPTTTPSP 1502 Query: 256 AEVQGMAGPAAEITV----SGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSS 311 + PA+ T+ + P T + + ++ P PTT P S+ L +++ Sbjct: 1503 PTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTP 1562 Query: 312 SSSSSSSSNSNSSSSSGPNPSTSFEP 337 S ++++ +++ P +T+ P Sbjct: 1563 SPPPTTTTTPPPTTTPSPPTTTTPSP 1588 Score = 41.6 bits (96), Expect = 0.001 Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 21/196 (10%) Query: 201 SSPPVAVPVPPPEDLLQSPSAVSTPP----PLPKPALAQSQEASRPNSP-----QLTPTA 251 ++PP PP P+ +PP P P S + P +P L PT Sbjct: 1462 TTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTT 1521 Query: 252 VPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSS 311 P P T + P T + + S+ L PTT + P ++ +++ Sbjct: 1522 TPSPPTTTTTTPPP---TTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP 1578 Query: 312 SSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELLEEL 371 S ++++ + + +++ P P+T+ P PT P + PT ++ Sbjct: 1579 SPPTTTTPSPPTITTTTPPPTTTPSP----PTTTTTTPPPTTTPSPPTTTPITPP----- 1629 Query: 372 MSSEVFAPLLRLSPPP 387 S+ P SPPP Sbjct: 1630 TSTTTLPPTTTPSPPP 1645 Score = 37.7 bits (86), Expect = 0.019 Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 14/153 (9%) Query: 204 PVAVPVPPPEDLLQSPSA---VSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQG 260 P PP +P A S PPP E+S P + + T + + S + Sbjct: 4190 PTGTQTGPPTHTSTAPIAELTTSNPPP----------ESSTPQTSRSTSSPLTESTTLLS 4239 Query: 261 MAGPAAEITVSGGPGTDSKDSGELSSLPLG-PTTLDTRPLQSSALLDSSSSSSSSSSSSS 319 PA E+T + P T + + L P + T P + ++ SSS+ + S+ Sbjct: 4240 TLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTV 4299 Query: 320 NSNSSSSSGPNPSTSFEPIKADPTGVLELPKEL 352 + ++S+ P P+ P TG+ P + Sbjct: 4300 QTTTTSAWTPTPTPLSTPSIIRTTGLRPYPSSV 4332 Score = 37.4 bits (85), Expect = 0.025 Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 11/137 (8%) Query: 204 PVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAG 263 P P+ + +P+ T P P + P TPT Sbjct: 4150 PTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP-----TPTGTQTGPPTHTSTA 4204 Query: 264 PAAEITVSGGP---GTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSN 320 P AE+T S P T S L T L T P A+ +S++ S+ ++ + Sbjct: 4205 PIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLSTLP---PAIEMTSTAPPSTPTAPTT 4261 Query: 321 SNSSSSSGPNPSTSFEP 337 ++ + P PST+ P Sbjct: 4262 TSGGHTLSPPPSTTTSP 4278 Score = 36.2 bits (82), Expect = 0.056 Identities = 33/159 (20%), Positives = 59/159 (37%), Gaps = 31/159 (19%) Query: 202 SPPVAVPVPPPEDLLQSP---------SAVSTPPPLPKPALAQSQEASRPNSPQLT---- 248 SPP P+ PP P + +TPPP P S P + +T Sbjct: 1501 SPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTP--------SPPTTTPITPPTS 1552 Query: 249 -----PTAVPG-----SAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRP 298 PT P + P+ T + P T + + ++ P PTT T P Sbjct: 1553 TTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTP 1612 Query: 299 LQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEP 337 ++ +++ + +S++ +++ P P+T+ P Sbjct: 1613 PPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 1651 Score = 34.3 bits (77), Expect = 0.21 Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 21/187 (11%) Query: 211 PPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEITV 270 P + + +PS +T P P + + P+ P T T P + P+ IT Sbjct: 1391 PMDKCITTPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTT------PSPPITT 1444 Query: 271 SGGPGTDSKDSGELS--------SLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSN 322 + P + S +S + P PTT + P + + +++++ +++ S Sbjct: 1445 TTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPT 1504 Query: 323 SSSSSGPNPSTSFEP--IKADPTGVLELPKELSEIFDPTRECMSSELLEELMSSEVFAPL 380 ++ + P +T+ P + PT P + PT ++ S+ P Sbjct: 1505 TTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPP-----TSTTTLPPT 1559 Query: 381 LRLSPPP 387 SPPP Sbjct: 1560 TTPSPPP 1566 >gi|55750053 atrophin-1 [Homo sapiens] Length = 1190 Score = 46.6 bits (109), Expect = 4e-05 Identities = 47/147 (31%), Positives = 65/147 (44%), Gaps = 25/147 (17%) Query: 206 AVPVPPPEDLLQSPSAVSTPPPL----------PKPALAQSQEASRPNSPQLTPTAVPGS 255 A P PP + + S PPP P PAL AS + P L +PG Sbjct: 270 APPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASA-SPPGLGAQPLPGH 328 Query: 256 -----AEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSS 310 A QGM G + GP + SLP ++ P++ SSSS Sbjct: 329 LPSPHAMGQGMGG------LPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPY---SSSS 379 Query: 311 SSSSSSSSSNSNSSSSSGPNPSTSFEP 337 SSS+++SSS+S+SSSS+ P P++ P Sbjct: 380 SSSAAASSSSSSSSSSASPFPASQALP 406 Score = 35.0 bits (79), Expect = 0.12 Identities = 56/222 (25%), Positives = 77/222 (34%), Gaps = 37/222 (16%) Query: 194 LVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQS-----------QEASRP 242 L ++ WS P P PPP L + S P P P AQS + Sbjct: 432 LPSQAVWSQGP---PPPPPYGRLLANSNAH-PGPFPPSTGAQSTAHPPVSTHHHHHQQQQ 487 Query: 243 NSPQLTPTAVPGSAEVQGMAGP----AAEITVSGG------PGTDSKDSGELSSLPLGPT 292 Q + G +GP A + GG P S G L P GP Sbjct: 488 QQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPA 547 Query: 293 TLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKEL 352 L P S + + SSSSNS+SS+S G P + P + P+ Sbjct: 548 HLP--PPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQG--------PQGA 597 Query: 353 SEIFDPT-RECMSSELLEELMSSEVFAPL-LRLSPPPGDHDY 392 F P SS L ++++ +P + + PPG Y Sbjct: 598 PYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPY 639 Score = 30.8 bits (68), Expect = 2.3 Identities = 33/121 (27%), Positives = 44/121 (36%), Gaps = 22/121 (18%) Query: 215 LLQSPSAVSTPPPL------PKPALAQSQEASRPNSPQLTPT---------------AVP 253 L Q P+ PPPL P + + EAS P +TPT A P Sbjct: 151 LSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210 Query: 254 GSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSS 313 G+ P V GP K G SS+ GP P ++ + SSS +S Sbjct: 211 GAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVG-GPNGGKQHPPPTTPISVSSSGASG 269 Query: 314 S 314 + Sbjct: 270 A 270 >gi|55750041 atrophin-1 [Homo sapiens] Length = 1190 Score = 46.6 bits (109), Expect = 4e-05 Identities = 47/147 (31%), Positives = 65/147 (44%), Gaps = 25/147 (17%) Query: 206 AVPVPPPEDLLQSPSAVSTPPPL----------PKPALAQSQEASRPNSPQLTPTAVPGS 255 A P PP + + S PPP P PAL AS + P L +PG Sbjct: 270 APPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASA-SPPGLGAQPLPGH 328 Query: 256 -----AEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSS 310 A QGM G + GP + SLP ++ P++ SSSS Sbjct: 329 LPSPHAMGQGMGG------LPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPY---SSSS 379 Query: 311 SSSSSSSSSNSNSSSSSGPNPSTSFEP 337 SSS+++SSS+S+SSSS+ P P++ P Sbjct: 380 SSSAAASSSSSSSSSSASPFPASQALP 406 Score = 35.0 bits (79), Expect = 0.12 Identities = 56/222 (25%), Positives = 77/222 (34%), Gaps = 37/222 (16%) Query: 194 LVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQS-----------QEASRP 242 L ++ WS P P PPP L + S P P P AQS + Sbjct: 432 LPSQAVWSQGP---PPPPPYGRLLANSNAH-PGPFPPSTGAQSTAHPPVSTHHHHHQQQQ 487 Query: 243 NSPQLTPTAVPGSAEVQGMAGP----AAEITVSGG------PGTDSKDSGELSSLPLGPT 292 Q + G +GP A + GG P S G L P GP Sbjct: 488 QQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPA 547 Query: 293 TLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKEL 352 L P S + + SSSSNS+SS+S G P + P + P+ Sbjct: 548 HLP--PPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQG--------PQGA 597 Query: 353 SEIFDPT-RECMSSELLEELMSSEVFAPL-LRLSPPPGDHDY 392 F P SS L ++++ +P + + PPG Y Sbjct: 598 PYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPY 639 Score = 30.8 bits (68), Expect = 2.3 Identities = 33/121 (27%), Positives = 44/121 (36%), Gaps = 22/121 (18%) Query: 215 LLQSPSAVSTPPPL------PKPALAQSQEASRPNSPQLTPT---------------AVP 253 L Q P+ PPPL P + + EAS P +TPT A P Sbjct: 151 LSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210 Query: 254 GSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSS 313 G+ P V GP K G SS+ GP P ++ + SSS +S Sbjct: 211 GAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVG-GPNGGKQHPPPTTPISVSSSGASG 269 Query: 314 S 314 + Sbjct: 270 A 270 >gi|222418647 mucin 7, secreted precursor [Homo sapiens] Length = 377 Score = 46.2 bits (108), Expect = 5e-05 Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 6/151 (3%) Query: 196 NKEAWSSPPVAVPV--PPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVP 253 N SS PV P P+D +P S P P + A + + P +P T A P Sbjct: 144 NVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPP 203 Query: 254 -GSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSS 312 SA + A P + P + S E ++ P P+ PL SSA +++ Sbjct: 204 SSSAPPETTAAPPTPPATTPAPPSSSAPP-ETTAAPPTPSATTPAPLSSSA--PPETTAV 260 Query: 313 SSSSSSSNSNSSSSSGPNPSTSFEPIKADPT 343 + S++ + SS+S P +T+ P + T Sbjct: 261 PPTPSATTLDPSSASAPPETTAAPPTPSATT 291 Score = 40.8 bits (94), Expect = 0.002 Identities = 36/159 (22%), Positives = 57/159 (35%), Gaps = 11/159 (6%) Query: 202 SPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGM 261 +P P PP +P + PP P +S P P P + Sbjct: 171 TPSATTPAPPSSS---APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPS 227 Query: 262 AGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNS 321 + E T + P T S + S P T P S+ LD SS+S+ ++++ Sbjct: 228 SSAPPETTAA--PPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP 285 Query: 322 NSSSSSGPNPS------TSFEPIKADPTGVLELPKELSE 354 S+++ PS T+ PI + L + SE Sbjct: 286 TPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSE 324 Score = 36.2 bits (82), Expect = 0.056 Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 19/148 (12%) Query: 202 SPPVAVPVPPPEDLLQSPSAVSTPPPLPK---PALAQSQEASRPNSPQLTPTAV---PGS 255 +PP P PP +P + PP P PA S + TP+A P S Sbjct: 217 TPPATTPAPPSSS---APPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSS 273 Query: 256 AEV---QGMAGPAAEITVSGGPGTDSKDSGELSSLPL-----GPTTLDTRPLQSSALLDS 307 A A P T P + + E ++ P+ PTTL ++SA Sbjct: 274 ASAPPETTAAPPTPSATTPAPPSSPAPQ--ETTAAPITTPNSSPTTLAPDTSETSAAPTH 331 Query: 308 SSSSSSSSSSSSNSNSSSSSGPNPSTSF 335 +++S ++ +++ +S+ G N + F Sbjct: 332 QTTTSVTTQTTTTKQPTSAPGQNKISRF 359 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.308 0.128 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,261,313 Number of Sequences: 37866 Number of extensions: 1143071 Number of successful extensions: 20859 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 401 Number of HSP's successfully gapped in prelim test: 1034 Number of HSP's that attempted gapping in prelim test: 11100 Number of HSP's gapped (non-prelim): 6493 length of query: 413 length of database: 18,247,518 effective HSP length: 105 effective length of query: 308 effective length of database: 14,271,588 effective search space: 4395649104 effective search space used: 4395649104 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.